BLASTX nr result

ID: Bupleurum21_contig00018009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00018009
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               137   9e-31
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   135   3e-30
emb|CCH50954.1| T1.2 [Malus x robusta]                                123   1e-26
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   117   1e-24
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         108   6e-22

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  137 bits (345), Expect = 9e-31
 Identities = 69/140 (49%), Positives = 88/140 (62%)
 Frame = +3

Query: 3   AKARERGRRDLGNVRFVKDDLGQVLVKDDAIKERWNRYFYNLFNEARGSETGVVQAGSIS 182
           A+ARE+  RDL  VR +KD+ G+VL  ++A+K+RW  YF+NLFNE       + +  +  
Sbjct: 490 ARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFNEGHERSASLWELSNSE 549

Query: 183 PARPNSPGVSISMEEVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFNNILRD 362
             R  S    I  EEV  AL+KM   KA+GPD IPIEVW  LG+ G  WL  LFN IL+ 
Sbjct: 550 ECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILKT 609

Query: 363 TKMPAEWRRSIVVPFFKNKG 422
            KMP EWR S +VP +KNKG
Sbjct: 610 KKMPNEWRTSTLVPIYKNKG 629


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/140 (49%), Positives = 88/140 (62%)
 Frame = +3

Query: 3   AKARERGRRDLGNVRFVKDDLGQVLVKDDAIKERWNRYFYNLFNEARGSETGVVQAGSIS 182
           A+ARE+  RDL  VR +KD+ G+VL  ++A+K++W  YF+NLFNE       + +  +  
Sbjct: 94  ARAREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHNLFNEGHERSASLGELSNSE 153

Query: 183 PARPNSPGVSISMEEVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFNNILRD 362
             R  S    I  EEV  AL+KM   KAVGPD IPIEVW  LG+ G  WL  LFN IL+ 
Sbjct: 154 ECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKT 213

Query: 363 TKMPAEWRRSIVVPFFKNKG 422
            KMP EWR S +VP +KNKG
Sbjct: 214 KKMPNEWRTSPLVPIYKNKG 233


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/140 (47%), Positives = 85/140 (60%)
 Frame = +3

Query: 3   AKARERGRRDLGNVRFVKDDLGQVLVKDDAIKERWNRYFYNLFNEARGSETGVVQAGSIS 182
           AK RE+  RDL  VR +KD+ G+VL  ++A+K+R   YF+NLFNE     T + +  +  
Sbjct: 113 AKVREKKTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHNLFNEGHEWSTSLGELSNSE 172

Query: 183 PARPNSPGVSISMEEVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFNNILRD 362
             R       I  EEV  AL+KM   KAVGP+ IPI+VW  LG+ G  WL  LFN IL+ 
Sbjct: 173 EYRNYFFYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKVLGETGITWLTDLFNRILKM 232

Query: 363 TKMPAEWRRSIVVPFFKNKG 422
            KM  EWR S +VP +KNKG
Sbjct: 233 KKMSNEWRNSTLVPIYKNKG 252


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/140 (45%), Positives = 84/140 (60%)
 Frame = +3

Query: 3    AKARERGRRDLGNVRFVKDDLGQVLVKDDAIKERWNRYFYNLFNEARGSETGVVQAGSIS 182
            AK+RER  RDL  V+ +KD   +VL +++ I ERW  YFY LFNE + +   + +  +  
Sbjct: 889  AKSRERRTRDLDQVKCIKDKDREVLAQEEKINERWKSYFYELFNEGQKTLPSLGRLCTRE 948

Query: 183  PARPNSPGVSISMEEVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFNNILRD 362
              +  +    I   EVK AL++M   +AVGPD IPIEVW  LG  G  WL  LF  ILR 
Sbjct: 949  EDQNFNYYRRIRDFEVKEALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRS 1008

Query: 363  TKMPAEWRRSIVVPFFKNKG 422
             KMP EWR+S +VP ++ KG
Sbjct: 1009 KKMPDEWRKSTLVPIYRIKG 1028


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/122 (45%), Positives = 73/122 (59%)
 Frame = +3

Query: 57  DDLGQVLVKDDAIKERWNRYFYNLFNEARGSETGVVQAGSISPARPNSPGVSISMEEVKG 236
           D  G+VL +++ I ERW  YFY LFNE + + + + +  +    +       I   EVK 
Sbjct: 2   DKDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKE 61

Query: 237 ALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFNNILRDTKMPAEWRRSIVVPFFKN 416
           AL +M   +AVGPD IPIEVW  LG+    WL  LFN ILR  KMP EWR+S +VP +KN
Sbjct: 62  ALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKN 121

Query: 417 KG 422
           KG
Sbjct: 122 KG 123


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