BLASTX nr result

ID: Bupleurum21_contig00017985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017985
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    70   1e-10
emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]    70   1e-10
emb|CBI30968.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_003541671.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    57   2e-06
ref|XP_003547197.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    56   3e-06

>ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
           vinifera]
          Length = 1044

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
 Frame = +3

Query: 33  SMKDSKSCKKLNYTKNVKFVPADNP-----NDCQNIHAKINQSSG------------KIS 161
           S  + K  K+L  +K +K    D       +D Q  H K++  S             ++ 
Sbjct: 562 SKVNQKRDKRLRPSKKLKVSTDDISKYGLIDDTQEGHTKVSAKSTQPINNNQCNPEVRVL 621

Query: 162 DESPNMNNVLPSKSG-ILRKCGKRPDSIKCFFCHSAEDSEASGIMVHYLNGKPVKVDYTG 338
           D S      L + SG  LRKC   P+ I C FCHSA+DSEASG MVHY NG+P+  D+ G
Sbjct: 622 DYSSTAKKALSATSGGALRKCESIPNKISCAFCHSAQDSEASGEMVHYFNGRPIAADHNG 681


>emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]
          Length = 952

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
 Frame = +3

Query: 33  SMKDSKSCKKLNYTKNVKFVPADNP-----NDCQNIHAKINQSSG------------KIS 161
           S  + K  K+L  +K +K    D       +D Q  H K++  S             ++ 
Sbjct: 505 SKVNQKRDKRLRPSKKLKVSTDDISKYGLIDDTQEGHTKVSAKSTQPINNNQCNPEVRVL 564

Query: 162 DESPNMNNVLPSKSG-ILRKCGKRPDSIKCFFCHSAEDSEASGIMVHYLNGKPVKVDYTG 338
           D S      L + SG  LRKC   P+ I C FCHSA+DSEASG MVHY NG+P+  D+ G
Sbjct: 565 DYSSTAKKALSATSGGALRKCESIPNKISCAFCHSAQDSEASGEMVHYFNGRPIAADHNG 624


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +3

Query: 153  KISDESPNMNNVLPSKSG-ILRKCGKRPDSIKCFFCHSAEDSEASGIMVHYLNGKPVKVD 329
            ++ D S      L + SG  LRKC   P+ I C FCHSA+DSEASG MVHY NG+P+  D
Sbjct: 988  RVLDYSSTAKKALSATSGGALRKCESIPNKISCAFCHSAQDSEASGEMVHYFNGRPIAAD 1047

Query: 330  YTG 338
            + G
Sbjct: 1048 HNG 1050


>ref|XP_003541671.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
           max]
          Length = 979

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = +3

Query: 207 ILRKCGKRPDSIKCFFCHSAEDSEASGIMVHYLNGKPVKVDYTG 338
           +LRKC     + +C FC S+E+SEASG MVHYL+G+PV  DY G
Sbjct: 580 VLRKCENLVKNYQCVFCLSSEESEASGPMVHYLDGRPVTSDYEG 623


>ref|XP_003547197.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
           max]
          Length = 985

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
 Frame = +3

Query: 39  KDSKSC-KKLNYTKNVKFVPADNPNDCQNIHAKINQSSGKISDESPNMNNVLPSK----- 200
           + S SC K+L  TK  K + +D  +  +N+   +   S     +  ++N+    K     
Sbjct: 524 RKSMSCSKELKATKRQK-LSSDCISKTKNVEEILPIESIHQGPDVRDLNDTSKEKHCPLM 582

Query: 201 -SGILRKCGKRPDSIKCFFCHSAEDSEASGIMVHYLNGKPVKVDYTG 338
               LRKC       +C FC S+E+SE SG MVHYL+G+PV  DY G
Sbjct: 583 DQTALRKCESHVTKYQCIFCLSSEESETSGPMVHYLDGRPVTADYEG 629


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