BLASTX nr result

ID: Bupleurum21_contig00017980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017980
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...    80   2e-13
emb|CBI24130.3| unnamed protein product [Vitis vinifera]               80   2e-13
emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera]    80   2e-13
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...    68   9e-10

>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = -2

Query: 312  KHKQALKIVADEVETLKHGSSQ-PEGTSAVRVFSGNLLDEMATAYLQSVENFEQVAQPII 136
            KHK ALK V+DE+E LKH     PEGTS V++ SG LLD++A AY  +VENFE++A  + 
Sbjct: 1550 KHKLALKRVSDELEKLKHAKGNLPEGTSVVQLLSGPLLDDLAAAYALTVENFEKLAHSVF 1609

Query: 135  NEVEHP----NPAVAADTSTLGASSGHIVPTVAPVTISPAPP 22
            +E+       +P+   DTS+  A++G   P   P  ++P  P
Sbjct: 1610 SELGARALPLDPSSTVDTSSSAATTGLTAPAQPPSILTPVVP 1651


>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = -2

Query: 312  KHKQALKIVADEVETLKHGSSQ-PEGTSAVRVFSGNLLDEMATAYLQSVENFEQVAQPII 136
            KHK ALK V+DE+E LKH     PEGTS V++ SG LLD++A AY  +VENFE++A  + 
Sbjct: 1551 KHKLALKRVSDELEKLKHAKGNLPEGTSVVQLLSGPLLDDLAAAYALTVENFEKLAHSVF 1610

Query: 135  NEVEHP----NPAVAADTSTLGASSGHIVPTVAPVTISPAPP 22
            +E+       +P+   DTS+  A++G   P   P  ++P  P
Sbjct: 1611 SELGARALPLDPSSTVDTSSSAATTGLTAPAQPPSILTPVVP 1652


>emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera]
          Length = 1491

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
 Frame = -2

Query: 312  KHKQALKIVADEVETLKHGSSQ-PEGTSAVRVFSGNLLDEMATAYLQSVENFEQVAQPII 136
            KHK ALK V+DE+E LKH     PEGTS V++ SG LLD++A AY  +VENFE++A  + 
Sbjct: 954  KHKLALKRVSDELEKLKHAKGNLPEGTSVVQLLSGPLLDDLAAAYALTVENFEKLAHSVF 1013

Query: 135  NEVEHP----NPAVAADTSTLGASSGHIVPTVAPVTISPAPP 22
            +E+       +P+   DTS+  A++G   P   P  ++P  P
Sbjct: 1014 SELGARALPLDPSSTVDTSSSAATTGLTAPAQPPSILTPVVP 1055


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
            predicted protein [Populus trichocarpa]
          Length = 2052

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
 Frame = -2

Query: 309  HKQALKIVADEVETLKHGSSQ-PEGTSAVRVFSGNLLDEMATAYLQSVENFEQVAQPIIN 133
            HKQ LK ++DE+E LKH     PEGTS V++ SG +LD++A  Y+ ++ENFE+VA  + +
Sbjct: 1533 HKQVLKRISDELEKLKHAEGNLPEGTSVVQLLSGTILDDLAATYVSAIENFERVALSVSS 1592

Query: 132  EV-----EHPNPAVAADTSTLGASSGHIVPTVAPVTISPAPPLKGIP 7
            E+        NP +   ++T+  + G  VP+ A + +SP  P   +P
Sbjct: 1593 ELGAGVQSVENPLIPDASATV--TPGQAVPSQATI-VSPVAPHAHLP 1636


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
            gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
            [Ricinus communis]
          Length = 2095

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/99 (36%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
 Frame = -2

Query: 312  KHKQALKIVADEVETLKHGSSQ-PEGTSAVRVFSGNLLDEMATAYLQSVENFEQVAQPII 136
            +HK+AL+ +++E+E LKH     PEGTS +++ SG +LD+ ATAY+ +VE+FE+ A  + 
Sbjct: 1561 EHKEALRRLSNELEKLKHAEGNLPEGTSVMQLLSGAVLDDFATAYVLAVESFEKSANSVS 1620

Query: 135  NEVEHPNPAVAAD--TSTLGASSGHIVPTVAPVTISPAP 25
             ++  P  ++ A    +++ AS+G +V +   ++ S AP
Sbjct: 1621 VQLGAPAASIEASIPDASVAASAGQLVSSQPTISSSVAP 1659


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