BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017868
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...    67   1e-09
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]    63   3e-08
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/70 (45%), Positives = 46/70 (65%)
 Frame = +3

Query: 66  RLITSATAATEPEIVAAICGSLRRGLNWENLTKKYNNLELNKNTQIIEKILLELKQPHDA 245
           R +   T      +V++IC SLRRG NW+ L +K+ +L+L  N  +++ +LLELK+P DA
Sbjct: 33  RFLHDGTKTESDTVVSSICDSLRRGYNWDTLNRKFESLQL--NNLLVKNVLLELKEPTDA 90

Query: 246 NWALKFFHWS 275
             AL FFHWS
Sbjct: 91  KRALGFFHWS 100


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = +3

Query: 105 IVAAICGSLRRGLNWENLTKKYNNLELNKNTQIIEKILLELKQPHDANWALKFFHWS 275
           IV AIC SLRRG NW +L+ K+  +ELN    ++EK+LLELK+P DA  AL FFHWS
Sbjct: 46  IVYAICDSLRRGHNWVSLSGKFQYVELNH--LLVEKVLLELKEPIDAKRALGFFHWS 100


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +3

Query: 108 VAAICGSLRRGLNWENLTKKYNNLELNKNTQIIEKILLELKQPHDANWALKFFHWS 275
           V  +C SLRRGLNW+ L +++ +LEL ++   + ++LLELK+P DA  AL FFHWS
Sbjct: 41  VNMLCDSLRRGLNWDALNQRFGSLELTES--FVGRVLLELKKPIDAKQALGFFHWS 94


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +3

Query: 108 VAAICGSLRRGLNWENLTKKYNNLELNKNTQIIEKILLELKQPHDANWALKFFHWS 275
           V  +C SLRRGLNW+ L +++ +LEL ++   + ++LLELK+P DA  AL FFHWS
Sbjct: 41  VNMLCDSLRRGLNWDALNQRFGSLELTES--FVGRVLLELKKPIDAKQALGFFHWS 94


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = +3

Query: 108 VAAICGSLRRGLNWENLTKKYNNLELNKNTQIIEKILLELKQPHDANWALKFFHWS 275
           V +IC SL R  +W+ L++K+  LELN    +++K+LL+ +QP DA  AL FFHWS
Sbjct: 42  VNSICDSLTRRQSWDTLSRKFQFLELNDF--LVQKVLLKFQQPVDAKRALGFFHWS 95