BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017867
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   134   8e-30
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   134   8e-30

>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/137 (53%), Positives = 102/137 (74%), Gaps = 3/137 (2%)
 Frame = -2

Query: 407 LKFFHWSTHKTHIKHNPFVYCITIHILARARLIKDAQALLESVLVKTSSGT---KVLDML 237
           L FFHWS  + +  H P  + I IHIL +ARL+ DA+ALLES+L K    +    V+D L
Sbjct: 89  LGFFHWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSL 148

Query: 236 FRSYEITESTPFVFDLFVQSCAKLKMIDDAMCVCEFLDKQGFNLSVISYNTLMNVVQKSE 57
             SYE+T S+PFVFDL VQ+CAKL++ID A+CVC  L+++GF+LS+IS+NTL++VV+KS+
Sbjct: 149 MDSYEVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSD 208

Query: 56  RGHLVWKVYKHMIGRRV 6
           +   VWK+Y+ MI +RV
Sbjct: 209 QNLKVWKIYEQMIRKRV 225


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/137 (53%), Positives = 101/137 (73%), Gaps = 3/137 (2%)
 Frame = -2

Query: 407 LKFFHWSTHKTHIKHNPFVYCITIHILARARLIKDAQALLESVLVKTSSGT---KVLDML 237
           L FFHWS  + +  H P  + I IHIL +ARL+ DA+ALLES+L K    +    V+D L
Sbjct: 67  LGFFHWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSL 126

Query: 236 FRSYEITESTPFVFDLFVQSCAKLKMIDDAMCVCEFLDKQGFNLSVISYNTLMNVVQKSE 57
             SYE+T S+PFVFDL VQ+CAKL++ID A+CVC  L+++GF+LS+IS+NTL++VV+KS+
Sbjct: 127 MDSYEVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSD 186

Query: 56  RGHLVWKVYKHMIGRRV 6
               VWK+Y+ MI +RV
Sbjct: 187 ENLKVWKIYEQMIRKRV 203


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/135 (53%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
 Frame = -2

Query: 419 ANWPLKFFHWSTHKTHIKHNPFVYCITIHILARARLIKDAQALLESVLVKTS-SGTKVLD 243
           A   L FFHWS    +++H    YCITIHIL  A+L+ DAQ+LLES L K + S   V+D
Sbjct: 84  AKQALGFFHWSAQCKNLEHGLASYCITIHILVGAQLLMDAQSLLESTLKKNAGSRFLVVD 143

Query: 242 MLFRSYEITESTPFVFDLFVQSCAKLKMIDDAMCVCEFLDKQGFNLSVISYNTLMNVVQK 63
            L  SY IT S P VFDL VQS +KL+M +    VC +L++ GF+LS+IS+NTL++VVQK
Sbjct: 144 SLLSSYNITGSNPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQK 203

Query: 62  SERGHLVWKVYKHMI 18
           S+   LVWK+Y+HMI
Sbjct: 204 SDNYPLVWKIYEHMI 218


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/137 (47%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
 Frame = -2

Query: 407 LKFFHWSTHKTHIKHNPFVYCITIHILARARLIKDAQALLESVL---VKTSSGTKVLDML 237
           L FFHWS  + +  H  + YC+ ++IL RA+L+ DAQALLES+L   V+ SS   ++D L
Sbjct: 94  LGFFHWSAQRKNFVHGVWSYCLMVNILVRAQLLNDAQALLESILKKNVEDSSEFLIVDSL 153

Query: 236 FRSYEITESTPFVFDLFVQSCAKLKMIDDAMCVCEFLDKQGFNLSVISYNTLMNVVQKSE 57
             SY+I  S+P VF+L VQ+ AKL++ +    +C +L++ GF LS++S+NTL++VVQKS+
Sbjct: 154 LDSYKIIVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSD 213

Query: 56  RGHLVWKVYKHMIGRRV 6
           +  LVWK+Y+HMI +R+
Sbjct: 214 QYPLVWKIYEHMIHKRI 230


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/135 (52%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
 Frame = -2

Query: 419 ANWPLKFFHWSTHKTHIKHNPFVYCITIHILARARLIKDAQALLESVLVKTS-SGTKVLD 243
           A   L FFHWS    +++H    YCITIHIL  A L+ DAQ+LLES L K + S   V+D
Sbjct: 84  AKQALGFFHWSAQCKNLEHGVASYCITIHILVGAHLLMDAQSLLESTLKKNAGSRFLVVD 143

Query: 242 MLFRSYEITESTPFVFDLFVQSCAKLKMIDDAMCVCEFLDKQGFNLSVISYNTLMNVVQK 63
            L  SY IT S P VFDL VQS +KL+M +    VC +L++ GF+LS+IS+N L++VVQK
Sbjct: 144 SLLSSYNITGSNPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQK 203

Query: 62  SERGHLVWKVYKHMI 18
           S+   LVWK+Y+HMI
Sbjct: 204 SDNYPLVWKIYEHMI 218