BLASTX nr result

ID: Bupleurum21_contig00017721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017721
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279486.1| PREDICTED: putative transcription factor bHL...   188   1e-45
ref|XP_002309216.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002514122.1| DNA binding protein, putative [Ricinus commu...   167   3e-39
ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative tra...   166   6e-39
ref|XP_002866174.1| predicted protein [Arabidopsis lyrata subsp....   159   5e-37

>ref|XP_002279486.1| PREDICTED: putative transcription factor bHLH041 [Vitis vinifera]
            gi|297738655|emb|CBI27900.3| unnamed protein product
            [Vitis vinifera]
          Length = 513

 Score =  188 bits (477), Expect = 1e-45
 Identities = 121/270 (44%), Positives = 172/270 (63%), Gaps = 4/270 (1%)
 Frame = +3

Query: 12   HFPTTMIGREDSAMTQAILAVIXXXXXXXXXXXHQPLQKT--SAFKRYRSVLGNTSQTTS 185
            +FP+  +  E +AMT+AILAVI           H P Q    SAF+ Y+    +T+Q T+
Sbjct: 243  NFPS--LESEHAAMTRAILAVISSSPPSSSSSSHHPPQHNYVSAFRNYKKP--STAQLTA 298

Query: 186  RFHKQNMLKRAIAFCRSTASQMRASQEQMNIENANRPTSNQLHHMISERKRREKLNESFQ 365
               +Q+MLKR++A+ ++    +R  QE +     + P+ +QLHHMISERKRREKLNESF 
Sbjct: 299  SSGRQSMLKRSMAYFKNL--HLRRRQELIQ---GSHPSVSQLHHMISERKRREKLNESFH 353

Query: 366  ALRTLLPPGSKKDKASLLSNTTEYINTLKAEVEELTRKNQTLEAQLQQLGSIDDQDLVMA 545
            ALRTLLPPGSKKDKAS+LS T EY+++LKA++ ELT++NQ LEAQ+    ++ ++     
Sbjct: 354  ALRTLLPPGSKKDKASVLSGTREYLSSLKAQILELTQRNQALEAQI----NLKNEGNNEG 409

Query: 546  SRFLADQSHDVWITNLSESTSEARN--FSVIVRNDHCSMLDLAIGVLEFLKQLRYVNLLS 719
                +++   V ITN SE T E RN    V VR D CS+LDL I +L+FLK+++ V+L+S
Sbjct: 410  GGDSSNERLSVQITNASEPTPEERNIDLQVTVRAD-CSILDLVIRILDFLKRVKNVSLMS 468

Query: 720  LQADVPTVETTSFIRIDFRPKIEERGEWDE 809
            + A+    ET+    +  R KI E  EWD+
Sbjct: 469  MNAETRMAETSPINHVILRLKI-EASEWDQ 497


>ref|XP_002309216.1| predicted protein [Populus trichocarpa] gi|222855192|gb|EEE92739.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  187 bits (476), Expect = 2e-45
 Identities = 119/265 (44%), Positives = 160/265 (60%), Gaps = 8/265 (3%)
 Frame = +3

Query: 39  EDSAMTQAILAVIXXXXXXXXXXXH------QPLQKTSAFKRYRSVLGNTSQTTSRFHKQ 200
           ED+ MT+AILAV+           H      +  Q  SAF  YRS L   +QT +  H+ 
Sbjct: 129 EDAVMTRAILAVLTFPSPSSSSSSHSLPHMHRVRQGASAFNNYRSALAPKTQTRASLHRH 188

Query: 201 NMLKRAIAFCRSTASQMRASQEQMNIENANRPTSNQLHHMISERKRREKLNESFQALRTL 380
           +ML R I + R      R + E+       RP+S QLHHMISERKRREK+NESF+ALR++
Sbjct: 189 SMLTRVITYYR------RLNIERREHMLGGRPSSTQLHHMISERKRREKINESFKALRSI 242

Query: 381 LPPGSKKDKASLLSNTTEYINTLKAEVEELTRKNQTLEAQLQQLGSIDDQDLVMASRFLA 560
           LPP +KKDKAS+L+ T EY+ +LKA+VEELTRKNQ LEAQL +         V   R  +
Sbjct: 243 LPPEAKKDKASILTRTREYLTSLKAQVEELTRKNQKLEAQLSKAA-------VSQVRDSS 295

Query: 561 DQSHDVWITNLSESTSEARNFSVIVR-NDHCSMLDLAI-GVLEFLKQLRYVNLLSLQADV 734
            +  DV +T++SESTSE R   ++V       +LD  I  +LEFL+Q+  V+L+S++A  
Sbjct: 296 YERLDVRVTHISESTSEQRIIDLVVNLRGESPILDTVITRILEFLRQVTDVSLISIEAST 355

Query: 735 PTVETTSFIRIDFRPKIEERGEWDE 809
            T E+TSF R+  R  IE   +WDE
Sbjct: 356 HTAESTSFNRVILRLNIEGT-DWDE 379


>ref|XP_002514122.1| DNA binding protein, putative [Ricinus communis]
            gi|223546578|gb|EEF48076.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 502

 Score =  167 bits (422), Expect = 3e-39
 Identities = 115/272 (42%), Positives = 156/272 (57%), Gaps = 15/272 (5%)
 Frame = +3

Query: 39   EDSAMTQAILAVIXXXXXXXXXXXHQ---------PLQKTSAFKRYRSVLGNTSQTTSRF 191
            ED+AMT+AILAV+                        Q+ SAFK Y   L       +  
Sbjct: 226  EDAAMTRAILAVLTSPSSSTSSSTPNLPYTHYHGVSQQRGSAFKSY---LAPRIPMRASL 282

Query: 192  HKQNMLKRAIAFCRSTASQMRASQEQMNIENANRPTSNQLHHMISERKRREKLNESFQAL 371
            H+QN+LKR+I + R+      A +E M    ANRPT+ QLHHMISERKRREK+NESF+AL
Sbjct: 283  HRQNLLKRSITYYRNLNI---ARREHMT---ANRPTTTQLHHMISERKRREKINESFEAL 336

Query: 372  RTLLPPGSKKDKASLLSNTTEYINTLKAEVEELTRKNQTLEAQLQQLGSIDDQDLVMASR 551
            R LLPP +KKDKAS+L+ T EY+  LK +V EL+++NQ LEA+L           V+A  
Sbjct: 337  RKLLPPEAKKDKASVLTRTREYLTLLKTQVAELSQRNQQLEAELLPAAIEAHAGEVIAEN 396

Query: 552  FLA---DQSHDVWITNLSESTSEAR---NFSVIVRNDHCSMLDLAIGVLEFLKQLRYVNL 713
              +   +   +V ITN+SESTSE     N  +++R + C + D  I +LEFLKQ+   NL
Sbjct: 397  QQSGSWEGRVEVRITNVSESTSEDERIINLLIVLRGE-CPVSDFVIRILEFLKQVNNANL 455

Query: 714  LSLQADVPTVETTSFIRIDFRPKIEERGEWDE 809
            +S+ A+     + S  R+  R +I E  EWDE
Sbjct: 456  MSVDANTSRGASRSLNRVILRLRI-EGNEWDE 486


>ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative transcription factor
           bHLH041-like, partial [Cucumis sativus]
          Length = 461

 Score =  166 bits (420), Expect = 6e-39
 Identities = 102/253 (40%), Positives = 155/253 (61%), Gaps = 13/253 (5%)
 Frame = +3

Query: 42  DSAMTQAILAVIXXXXXXXXXXXHQPLQK----------TSAFKRYRSVLGNTSQTTSRF 191
           D AMT+ ILAV+           H PL+K           SAFK++  VL  T +     
Sbjct: 205 DEAMTRTILAVLSSPACSSSSSVHPPLEKLPPSYRLNVKASAFKKFALVLTPTMRLNRNL 264

Query: 192 H-KQNMLKRAIAFCRSTASQMRASQEQMNIENANRPTSNQLHHMISERKRREKLNESFQA 368
             +Q++LKR++AF     + +   + +  +   +RPTS+QLHH+ISER+RREKLN+SFQA
Sbjct: 265 STRQSLLKRSLAFM----TNLNLMRVRERMPTTSRPTSSQLHHVISERRRREKLNDSFQA 320

Query: 369 LRTLLPPGSKKDKASLLSNTTEYINTLKAEVEELTRKNQTLEAQLQQLGSIDDQDLVMAS 548
           L++LLPPG+KKDK S+L+ T EY+++LKA+V EL+R+NQ LEAQL Q  S  +++   A 
Sbjct: 321 LKSLLPPGTKKDKGSVLTTTREYMSSLKAQVAELSRRNQQLEAQLLQ--SCKEEEKEEAI 378

Query: 549 RFLADQSHDVWITNLSESTSEAR--NFSVIVRNDHCSMLDLAIGVLEFLKQLRYVNLLSL 722
               +    V I+ + ESTSE +  + ++  R +  S+ ++ IGVLEFLKQL  V ++S+
Sbjct: 379 FPQKEIRFRVGISQVQESTSEGQIIDLNIATRGEFSSLTNIVIGVLEFLKQLNNVRVVSM 438

Query: 723 QADVPTVETTSFI 761
           + +     ++S I
Sbjct: 439 EGNTQLTPSSSSI 451


>ref|XP_002866174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312009|gb|EFH42433.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score =  159 bits (403), Expect = 5e-37
 Identities = 112/279 (40%), Positives = 162/279 (58%), Gaps = 21/279 (7%)
 Frame = +3

Query: 36  REDSAMTQAILAVIXXXXXXXXXXXH-QPLQKTSAFKRYRSVL-GNTSQTTSRFHKQNML 209
           RE+ AMT+AILAV+             Q  ++ +AF RY S++ G+         KQ+M+
Sbjct: 181 REEEAMTKAILAVLTGPSSPPSTSSSPQRKRRATAFNRYYSMISGHGRAPLPSLRKQSMM 240

Query: 210 KRAIAFCRSTASQMRASQEQMNIENANR-----------------PTSNQLHHMISERKR 338
           KRAI+F        R   E+   ENA                   P++ QLHHMISERKR
Sbjct: 241 KRAISFYNRLNIYQR---ERFTRENATTHGEGSGGSSGGGRYTSGPSATQLHHMISERKR 297

Query: 339 REKLNESFQALRTLLPPGSKKDKASLLSNTTEYINTLKAEVEELTRKNQTLEAQLQQLGS 518
           REKLNESFQALR+LLPPG+KKDKAS+LS   E +++L+ E+ +L  +N+ LEA+L     
Sbjct: 298 REKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNRKLEAKL----- 352

Query: 519 IDDQDLVMASRFLADQSHDVWITNLSESTSEAR--NFSVIVRNDHCSMLDLAIGVLEFLK 692
             ++D++  +  L ++  +V I+++SESTS  R  +  V++R D   + DL I +LEFLK
Sbjct: 353 AGERDII--NDLLPNERFNVHISHISESTSRERILDLRVVLRGDSIRVDDLMIRLLEFLK 410

Query: 693 QLRYVNLLSLQADVPTVETTSFIRIDFRPKIEERGEWDE 809
           Q+  V+L+S++A       TS + +  R KIE  GE DE
Sbjct: 411 QINNVSLVSIEART-RARDTSVVLVSLRLKIE--GECDE 446


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