BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017625
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148818.1| PREDICTED: putative transcription elongation...    99   4e-19
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...    97   2e-18
ref|XP_003634397.1| PREDICTED: putative transcription elongation...    85   5e-15
ref|XP_002265283.2| PREDICTED: putative transcription elongation...    85   5e-15
emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]    85   5e-15

>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like [Cucumis sativus]
          Length = 1044

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/81 (61%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = +3

Query: 105 SGSQFFDLEAQXXXXXXXXXXXXXXXFIVDNGAELPDDEDNRRLHRRPQLPH--EEEDVE 278
           SGSQF D+EA+               FIVDN A++PD++DNRR+HRRP LP   E+EDVE
Sbjct: 83  SGSQFLDIEAEVDSDDDEEDDEAEDDFIVDNVADIPDEDDNRRMHRRPLLPREDEQEDVE 142

Query: 279 ALERSIQARYARSNHTEYDEE 341
           ALER IQARYARSNH EYDEE
Sbjct: 143 ALERRIQARYARSNHMEYDEE 163


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
           gi|223534550|gb|EEF36249.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 1045

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/82 (62%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
 Frame = +3

Query: 105 SGSQFFDLEAQXXXXXXXXXXXXXXX-FIVDNGAELPDDEDNRRLHRRPQLPHE--EEDV 275
           SG QFFDLEA+                FIVDNGA+LPD++D RR+HRRP LP E  +ED+
Sbjct: 86  SGKQFFDLEAEVDSDEEEEEDDDAEDDFIVDNGADLPDEDDGRRVHRRPLLPREDDQEDM 145

Query: 276 EALERSIQARYARSNHTEYDEE 341
           EALER IQARYARS+HTEYDEE
Sbjct: 146 EALERRIQARYARSSHTEYDEE 167


>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 105 SGSQFFDLEAQXXXXXXXXXXXXXXXFIVDNGAELPDDEDNRRLHRRPQLPH--EEEDVE 278
           SGS+F DLEA                FIVD GAELPD++D +R+ RRP LP   E+ED E
Sbjct: 79  SGSEFLDLEAAVDSDEEEEEEDGEDDFIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFE 138

Query: 279 ALERSIQARYARSNHTEYDEE 341
           ALER IQ RY +S+H EYDEE
Sbjct: 139 ALERKIQERYGKSSHAEYDEE 159


>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like isoform 1 [Vitis vinifera]
           gi|302142757|emb|CBI19960.3| unnamed protein product
           [Vitis vinifera]
          Length = 1034

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 105 SGSQFFDLEAQXXXXXXXXXXXXXXXFIVDNGAELPDDEDNRRLHRRPQLPH--EEEDVE 278
           SGS+F DLEA                FIVD GAELPD++D +R+ RRP LP   E+ED E
Sbjct: 79  SGSEFLDLEAAVDSDEEEEEEDGEDDFIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFE 138

Query: 279 ALERSIQARYARSNHTEYDEE 341
           ALER IQ RY +S+H EYDEE
Sbjct: 139 ALERKIQERYGKSSHAEYDEE 159


>emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
          Length = 1107

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 105 SGSQFFDLEAQXXXXXXXXXXXXXXXFIVDNGAELPDDEDNRRLHRRPQLPH--EEEDVE 278
           SGS+F DLEA                FIVD GAELPD++D +R+ RRP LP   E+ED E
Sbjct: 79  SGSEFLDLEAAVDSDEEEEEEDGEDDFIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFE 138

Query: 279 ALERSIQARYARSNHTEYDEE 341
           ALER IQ RY +S+H EYDEE
Sbjct: 139 ALERKIQERYGKSSHAEYDEE 159