BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017518
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519032.1| double-stranded RNA binding protein, putativ...    60   3e-12
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]    59   6e-12
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    59   6e-12
emb|CBI35690.3| unnamed protein product [Vitis vinifera]               59   6e-12
ref|XP_002329762.1| predicted protein [Populus trichocarpa] gi|2...    58   3e-11

>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223541695|gb|EEF43243.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 978

 Score = 60.5 bits (145), Expect(2) = 3e-12
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = -1

Query: 489 VP*VQRRGNWYPIEEEMSSRQLNPPMPVPPKELFLQPELPPVDKQQPRRPSFVSKVDNST 310
           VP VQ RGNW P+EEEMS RQLN  +    +E  +  E   +DK +P  PSF  KV++S 
Sbjct: 602 VPRVQSRGNWVPVEEEMSPRQLNRAV---TREFPMDTEPMHIDKHRPHHPSFFPKVESSI 658

Query: 309 PSD 301
           PS+
Sbjct: 659 PSE 661



 Score = 36.6 bits (83), Expect(2) = 3e-12
 Identities = 18/26 (69%), Positives = 22/26 (84%), Gaps = 2/26 (7%)
 Frame = -3

Query: 598 EVPESELHPE--RRLLILQHHQDIKE 527
           EVPESEL P+  RRLLILQH QD+++
Sbjct: 557 EVPESELDPDTRRRLLILQHGQDLRD 582


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 59.3 bits (142), Expect(2) = 6e-12
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = -1

Query: 489 VP*VQRRGNWYPIEEEMSSRQLNPPMPVPPKELFLQPELPPVDKQQPRRPSFVSKVDNST 310
           VP VQ RG+W+P +EEMS RQLN  +   PKE  L  +   ++K +P  PSF  KV++S 
Sbjct: 552 VPRVQSRGSWFPADEEMSPRQLNRAV---PKEFPLDSDTMHIEKHRPHHPSFFHKVESSA 608

Query: 309 PSD 301
            SD
Sbjct: 609 SSD 611



 Score = 36.6 bits (83), Expect(2) = 6e-12
 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = -3

Query: 598 EVPESELHPE--RRLLILQHHQDIKE 527
           EVPESEL P+  RRLLILQH QD +E
Sbjct: 509 EVPESELDPDTRRRLLILQHGQDTRE 534


>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score = 59.3 bits (142), Expect(2) = 6e-12
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = -1

Query: 489 VP*VQRRGNWYPIEEEMSSRQLNPPMPVPPKELFLQPELPPVDKQQPRRPSFVSKVDNST 310
           VP VQ RG+W+P +EEMS RQLN  +   PKE  L  +   ++K +P  PSF  KV++S 
Sbjct: 571 VPRVQSRGSWFPADEEMSPRQLNRAV---PKEFPLDSDTMHIEKHRPHHPSFFHKVESSA 627

Query: 309 PSD 301
            SD
Sbjct: 628 SSD 630



 Score = 36.6 bits (83), Expect(2) = 6e-12
 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = -3

Query: 598 EVPESELHPE--RRLLILQHHQDIKE 527
           EVPESEL P+  RRLLILQH QD +E
Sbjct: 528 EVPESELDPDTRRRLLILQHGQDTRE 553


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 59.3 bits (142), Expect(2) = 6e-12
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = -1

Query: 489 VP*VQRRGNWYPIEEEMSSRQLNPPMPVPPKELFLQPELPPVDKQQPRRPSFVSKVDNST 310
           VP VQ RG+W+P +EEMS RQLN  +   PKE  L  +   ++K +P  PSF  KV++S 
Sbjct: 571 VPRVQSRGSWFPADEEMSPRQLNRAV---PKEFPLDSDTMHIEKHRPHHPSFFHKVESSA 627

Query: 309 PSD 301
            SD
Sbjct: 628 SSD 630



 Score = 36.6 bits (83), Expect(2) = 6e-12
 Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 2/26 (7%)
 Frame = -3

Query: 598 EVPESELHPE--RRLLILQHHQDIKE 527
           EVPESEL P+  RRLLILQH QD +E
Sbjct: 528 EVPESELDPDTRRRLLILQHGQDTRE 553


>ref|XP_002329762.1| predicted protein [Populus trichocarpa] gi|222870824|gb|EEF07955.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 58.2 bits (139), Expect(2) = 3e-11
 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
 Frame = -1

Query: 480 VQRRGNWYPIEEEMSSRQLNPPMPVPPKELFLQPELPPVDKQQPRRPSFVSKVDNSTPSD 301
           VQ RG+W P+EEEM+ RQLN      P+E  L  +   ++K Q   PSF  KV+++ PSD
Sbjct: 106 VQSRGSWVPVEEEMTPRQLNR----TPREFPLDSDPMNIEKHQTHHPSFFPKVESNIPSD 161

Query: 300 IV*KEFDEI*QG*PASNS---TNKVYPSYHLF 214
            +  E   + +  P  N     N   P+YH F
Sbjct: 162 RMIHENQRLPKEAPYRNDRMRLNHSTPNYHSF 193



 Score = 35.4 bits (80), Expect(2) = 3e-11
 Identities = 18/27 (66%), Positives = 22/27 (81%), Gaps = 2/27 (7%)
 Frame = -3

Query: 598 EVPESELHPE--RRLLILQHHQDIKES 524
           EVPESEL P+  RRLLILQH QD +++
Sbjct: 60  EVPESELDPDTRRRLLILQHGQDSRDN 86