BLASTX nr result
ID: Bupleurum21_contig00017508
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00017508
(1008 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu... 278 1e-72
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i... 277 3e-72
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i... 277 3e-72
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2... 263 4e-68
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l... 259 9e-67
>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative
[Ricinus communis]
Length = 436
Score = 278 bits (712), Expect = 1e-72
Identities = 140/221 (63%), Positives = 168/221 (76%), Gaps = 1/221 (0%)
Frame = -1
Query: 1008 GYIPPYNGYGYQAPGTYGLMPLRLPPLQNQHGFQNMLSSVNQGSAVRGSAH-GFTTGMSP 832
GY+P YNGYGYQAPGTYGLMP RLPPLQ+Q F +++ VNQG+A+RG M P
Sbjct: 219 GYVPQYNGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGP 278
Query: 831 RNFSMPRASYVNSAHPTVTGGQYPLAYSRGIMSNRPLSGALNPIPPVPAMNHTATSPSIT 652
RN+++P ASYV SA+P V G QYP+AY G+MS RPLS + + P +++ATS +
Sbjct: 279 RNYALPPASYVGSAYPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATS---S 335
Query: 651 NVTTSSGGQLEGPPGANLFIYHIPQEFGDQELASSFQAFGRVLSAKVFVDKATGVSKCFG 472
V++SSGGQLEGPPG+NLFIYHIPQEFGDQELAS+FQ +G+VLSAKVFVDKATGVSKCFG
Sbjct: 336 GVSSSSGGQLEGPPGSNLFIYHIPQEFGDQELASAFQPYGKVLSAKVFVDKATGVSKCFG 395
Query: 471 FVSYDSPAAAQSAISMMNGYXXXXXXXXXXXKRDNKQNKLY 349
FVSYDSP AAQ+AI+MMNG KRDNKQ+K Y
Sbjct: 396 FVSYDSPTAAQTAINMMNGCQLGGKKLKVQLKRDNKQSKPY 436
>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera]
Length = 447
Score = 277 bits (708), Expect = 3e-72
Identities = 140/221 (63%), Positives = 164/221 (74%), Gaps = 1/221 (0%)
Frame = -1
Query: 1008 GYIPPYNGYGYQAPGTYGLMPLRLPPLQNQHGFQNMLSSVNQGSAVRGSAHGFTTGMSPR 829
GY+PPYNGYGYQAPG YGLM R+PP+Q+Q F NM+ VNQGSA+R A ++PR
Sbjct: 230 GYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPR 289
Query: 828 NFSMPRASYVNSAHPTVTGGQYPLAYSRGIMSNRPLSGALNPIPPVPAMNHTATSPSITN 649
N+++P ASY+ SA+P + G QYP+AY GIMS++PLSG+ PP T+ SP+ +
Sbjct: 290 NYAVPSASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMM---TSNSPTNSG 346
Query: 648 VTTSSGGQLEGPPGANLFIYHIPQEFGDQELASSFQAFGRVLSAKVFVDKATGVSKCFGF 469
SSGGQ+EGPPGANLFIYHIPQEFGD ELA +FQ FGRVLSAKVFVDKATG SKCFGF
Sbjct: 347 AGASSGGQVEGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGF 406
Query: 468 VSYDSPAAAQSAISMMNGYXXXXXXXXXXXKRD-NKQNKLY 349
VSYDSPA+AQSAISMMNG KRD NKQNK Y
Sbjct: 407 VSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNNKQNKPY 447
>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product
[Vitis vinifera]
Length = 437
Score = 277 bits (708), Expect = 3e-72
Identities = 140/221 (63%), Positives = 164/221 (74%), Gaps = 1/221 (0%)
Frame = -1
Query: 1008 GYIPPYNGYGYQAPGTYGLMPLRLPPLQNQHGFQNMLSSVNQGSAVRGSAHGFTTGMSPR 829
GY+PPYNGYGYQAPG YGLM R+PP+Q+Q F NM+ VNQGSA+R A ++PR
Sbjct: 220 GYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPR 279
Query: 828 NFSMPRASYVNSAHPTVTGGQYPLAYSRGIMSNRPLSGALNPIPPVPAMNHTATSPSITN 649
N+++P ASY+ SA+P + G QYP+AY GIMS++PLSG+ PP T+ SP+ +
Sbjct: 280 NYAVPSASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMM---TSNSPTNSG 336
Query: 648 VTTSSGGQLEGPPGANLFIYHIPQEFGDQELASSFQAFGRVLSAKVFVDKATGVSKCFGF 469
SSGGQ+EGPPGANLFIYHIPQEFGD ELA +FQ FGRVLSAKVFVDKATG SKCFGF
Sbjct: 337 AGASSGGQVEGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGF 396
Query: 468 VSYDSPAAAQSAISMMNGYXXXXXXXXXXXKRD-NKQNKLY 349
VSYDSPA+AQSAISMMNG KRD NKQNK Y
Sbjct: 397 VSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNNKQNKPY 437
>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
predicted protein [Populus trichocarpa]
Length = 432
Score = 263 bits (673), Expect = 4e-68
Identities = 134/219 (61%), Positives = 165/219 (75%), Gaps = 1/219 (0%)
Frame = -1
Query: 1008 GYIPPYNGYGYQAPGTYGLMPLRLPPLQNQHGFQNMLSSVNQGSAVRGSAH-GFTTGMSP 832
GY PPYNGYGYQAPG YGLMP RLPP+QNQ F +M+ VNQG+ +RG + +SP
Sbjct: 218 GYAPPYNGYGYQAPGVYGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISP 277
Query: 831 RNFSMPRASYVNSAHPTVTGGQYPLAYSRGIMSNRPLSGALNPIPPVPAMNHTATSPSIT 652
RN++ A+Y+ SA+PTVTG QYP+AY +M++RPLS + + P +++AT +
Sbjct: 278 RNYAP--ATYMGSAYPTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATP---S 332
Query: 651 NVTTSSGGQLEGPPGANLFIYHIPQEFGDQELASSFQAFGRVLSAKVFVDKATGVSKCFG 472
V SSG Q+EGPPGANLFIYHIPQEFGDQELA++F+AFG+VLSAKVFVDK TGVSKCFG
Sbjct: 333 GVGGSSGVQVEGPPGANLFIYHIPQEFGDQELANAFEAFGKVLSAKVFVDKVTGVSKCFG 392
Query: 471 FVSYDSPAAAQSAISMMNGYXXXXXXXXXXXKRDNKQNK 355
FVSYDSPAAAQ+AI+MMNG+ KRDNKQ+K
Sbjct: 393 FVSYDSPAAAQNAITMMNGFQLGGKKLKVQLKRDNKQSK 431
>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 259 bits (661), Expect = 9e-67
Identities = 132/219 (60%), Positives = 160/219 (73%)
Frame = -1
Query: 1005 YIPPYNGYGYQAPGTYGLMPLRLPPLQNQHGFQNMLSSVNQGSAVRGSAHGFTTGMSPRN 826
Y+PPYNGYGYQAP YGLMP R+PP+Q+QHG+ NM+ +NQG+A+R M+PRN
Sbjct: 220 YVPPYNGYGYQAPVGYGLMPYRMPPMQSQHGYHNMMPHMNQGNALRPD---LGPNMNPRN 276
Query: 825 FSMPRASYVNSAHPTVTGGQYPLAYSRGIMSNRPLSGALNPIPPVPAMNHTATSPSITNV 646
+ +P ASYV S +P V G Q+P+AY G++S RP++ + + P N+ A S +
Sbjct: 277 YHVPPASYVGS-YPAVPGLQHPMAYPTGMISPRPMNTSPGSVSPASGNNNHAAS---SGA 332
Query: 645 TTSSGGQLEGPPGANLFIYHIPQEFGDQELASSFQAFGRVLSAKVFVDKATGVSKCFGFV 466
+ +SGGQ EGPPGANLFIYHIPQEFGDQELA++FQ FGRVLSAKVFVDKATGVSKCFGFV
Sbjct: 333 SKNSGGQAEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFV 392
Query: 465 SYDSPAAAQSAISMMNGYXXXXXXXXXXXKRDNKQNKLY 349
SYD+P AAQSAISMMNG KRDNKQ K Y
Sbjct: 393 SYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQGKPY 431