BLASTX nr result

ID: Bupleurum21_contig00017500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017500
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vit...   233   1e-59
ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-lik...   222   2e-56
ref|XP_002510852.1| conserved hypothetical protein [Ricinus comm...   218   3e-55
ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-lik...   216   1e-54

>ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vitis vinifera]
           gi|225469308|ref|XP_002269782.1| PREDICTED: ycf20-like
           protein isoform 1 [Vitis vinifera]
           gi|297741124|emb|CBI31855.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  233 bits (594), Expect = 1e-59
 Identities = 116/144 (80%), Positives = 128/144 (88%)
 Frame = -2

Query: 486 LLEIGLFPRVKVLRSKCAEPVSRSSARLFKIRAAQNNEGPRRLVDIIRIVPEISKNYFKS 307
           LL+ GL    +V   KC+   SRSS R F ++A Q NEGPRRLVDIIRIVP++S+NYF+S
Sbjct: 12  LLKFGLATGTRVSHGKCSMLASRSSPRFFSVQAVQENEGPRRLVDIIRIVPQLSRNYFQS 71

Query: 306 PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP 127
           PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVL+TEYVTRFYYSRPKVTFP
Sbjct: 72  PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLITEYVTRFYYSRPKVTFP 131

Query: 126 VALLNNFKMGFTYGLFIDAFKLAS 55
           +ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 132 LALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|222859517|gb|EEE97064.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  225 bits (574), Expect = 3e-57
 Identities = 113/143 (79%), Positives = 124/143 (86%)
 Frame = -2

Query: 483 LEIGLFPRVKVLRSKCAEPVSRSSARLFKIRAAQNNEGPRRLVDIIRIVPEISKNYFKSP 304
           L++G  P+ +V   K    V RSS    +IRA Q NEGPRRL+DIIR +PE+S+NYF+ P
Sbjct: 13  LKLGFAPQRRVSSVKYGTSVFRSSTGRLRIRAVQENEGPRRLIDIIRTIPELSRNYFRRP 72

Query: 303 SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPV 124
           SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+
Sbjct: 73  SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPI 132

Query: 123 ALLNNFKMGFTYGLFIDAFKLAS 55
           ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 133 ALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-like [Glycine max]
          Length = 151

 Score =  222 bits (566), Expect = 2e-56
 Identities = 118/143 (82%), Positives = 125/143 (87%)
 Frame = -2

Query: 483 LEIGLFPRVKVLRSKCAEPVSRSSARLFKIRAAQNNEGPRRLVDIIRIVPEISKNYFKSP 304
           L  G  P+ KV  S     VSRSSA L +IRA Q N GPRRLVDIIR+VPE S+NYF+SP
Sbjct: 12  LSFGPLPKTKV--SVSGRLVSRSSAGL-RIRAVQENGGPRRLVDIIRLVPEFSRNYFRSP 68

Query: 303 SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPV 124
           SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVT+FYYSRPKVTFPV
Sbjct: 69  SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTKFYYSRPKVTFPV 128

Query: 123 ALLNNFKMGFTYGLFIDAFKLAS 55
           ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 129 ALLNNFKMGFTYGLFIDAFKLAS 151


>ref|XP_002510852.1| conserved hypothetical protein [Ricinus communis]
           gi|223549967|gb|EEF51454.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score =  218 bits (556), Expect = 3e-55
 Identities = 113/143 (79%), Positives = 124/143 (86%)
 Frame = -2

Query: 483 LEIGLFPRVKVLRSKCAEPVSRSSARLFKIRAAQNNEGPRRLVDIIRIVPEISKNYFKSP 304
           L++G   + +V   K    +SRSS  L  I+A Q+N GP+RLVDIIR VPE S+NYF+SP
Sbjct: 13  LKLGFGFQRRVSCGKYGMLISRSSRGLLSIQAVQDNGGPQRLVDIIRRVPEFSRNYFRSP 72

Query: 303 SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPV 124
           SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVTRFYYSRPKVTFPV
Sbjct: 73  SRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVICVLLTEYVTRFYYSRPKVTFPV 132

Query: 123 ALLNNFKMGFTYGLFIDAFKLAS 55
           ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 133 ALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-like [Cucumis sativus]
           gi|449530953|ref|XP_004172456.1| PREDICTED:
           uncharacterized protein ycf20-like [Cucumis sativus]
          Length = 156

 Score =  216 bits (551), Expect = 1e-54
 Identities = 112/145 (77%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
 Frame = -2

Query: 486 LLEIGLFPRVKVLRSKCAEPVSRSSA-RLFKIRAAQNNEGPRRLVDIIRIVPEISKNYFK 310
           LL  G  P++     +     SR S  R F+++A Q+  GPRRLVDIIR+VPE+S+NYF+
Sbjct: 12  LLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFR 71

Query: 309 SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF 130
           SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF
Sbjct: 72  SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF 131

Query: 129 PVALLNNFKMGFTYGLFIDAFKLAS 55
           P+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 132 PIALLNNFKMGFTYGLFIDAFKLAS 156


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