BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017499
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   372   e-101
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   322   5e-86
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,...   320   2e-85
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   317   3e-84

>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  372 bits (956), Expect = e-101
 Identities = 177/237 (74%), Positives = 198/237 (83%), Gaps = 5/237 (2%)
 Frame = +2

Query: 170  KMPPQSPP---NKVYFYYGHRKPSQNRPTVHGGLFTNRRTVNPDKKAILTQPKNFNLENW 340
            KMPPQ  P   +K YF+YGHRKPSQNRPTVHGGLF+NR T+NP    +     +FNL+NW
Sbjct: 539  KMPPQPQPPKPHKFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTHFNLQNW 598

Query: 341  DPDSPQLS--PPTTDPSAHFFSVAQTLSPIARYIVDSFRKHSQWGPQIVSDLNKLRRVTP 514
            DPDSP+    PP+  P   FF +A+ LSPIARYI DSFRKH  WGP +V+DLNKLRRVTP
Sbjct: 599  DPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTP 658

Query: 515  KLVAEVIKVQTDPRLSSKFFHWAGKQKGYKHDFACYNALAYCLNRNNQFRAADQVPELMN 694
             LVAEV+KVQTDP + SKFFHWAGKQKGYKH+FA YNA AYCLNR+NQFRAADQVPELMN
Sbjct: 659  VLVAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMN 718

Query: 695  MQGKAPTEKQFEILIRMHADAHRGLRVYYVYEKMKKFGVKPRVFLYNRILDALVKTG 865
            MQGK P+EKQFEILIRMH DA+RGLRVYYVYEKMKKFG+KPRVFLYNRI+D LVKTG
Sbjct: 719  MQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTG 775


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  370 bits (951), Expect = e-100
 Identities = 176/236 (74%), Positives = 197/236 (83%), Gaps = 5/236 (2%)
 Frame = +2

Query: 173 MPPQSPP---NKVYFYYGHRKPSQNRPTVHGGLFTNRRTVNPDKKAILTQPKNFNLENWD 343
           MPPQ  P   +K YF+YGHRKPSQNRPTVHGGLF+NR T+NP    +     +FNL+NWD
Sbjct: 1   MPPQPQPPKPHKFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTHFNLQNWD 60

Query: 344 PDSPQLS--PPTTDPSAHFFSVAQTLSPIARYIVDSFRKHSQWGPQIVSDLNKLRRVTPK 517
           PDSP+    PP+  P   FF +A+ LSPIARYI DSFRKH  WGP +V+DLNKLRRVTP 
Sbjct: 61  PDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPV 120

Query: 518 LVAEVIKVQTDPRLSSKFFHWAGKQKGYKHDFACYNALAYCLNRNNQFRAADQVPELMNM 697
           LVAEV+KVQTDP + SKFFHWAGKQKGYKH+FA YNA AYCLNR+NQFRAADQVPELMNM
Sbjct: 121 LVAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNM 180

Query: 698 QGKAPTEKQFEILIRMHADAHRGLRVYYVYEKMKKFGVKPRVFLYNRILDALVKTG 865
           QGK P+EKQFEILIRMH DA+RGLRVYYVYEKMKKFG+KPRVFLYNRI+D LVKTG
Sbjct: 181 QGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTG 236


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  322 bits (826), Expect = 5e-86
 Identities = 159/237 (67%), Positives = 191/237 (80%), Gaps = 7/237 (2%)
 Frame = +2

Query: 176 PPQSPPNKVYFYYGHRKPSQNRPTVHGGLFTNRRTVNPDK-KAILTQPKNFNLENWDPDS 352
           PP S P K YF+YGHRKPSQNRP V GGLFTNR+TV P   K  +T  K F+L  WDP  
Sbjct: 8   PPPSKPLKPYFFYGHRKPSQNRPVVRGGLFTNRQTVKPQPPKNPITPFKPFDLHKWDPQQ 67

Query: 353 -----PQLSPPTTDPSAHFFSVAQTLSPIARYIVDSFRKH-SQWGPQIVSDLNKLRRVTP 514
                PQ S P +  S H  +++Q LSPIAR+I+D+FRK+ +QWGP++V++L KLRRVTP
Sbjct: 68  NLPHQPQPSKPQSPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTP 127

Query: 515 KLVAEVIKVQTDPRLSSKFFHWAGKQKGYKHDFACYNALAYCLNRNNQFRAADQVPELMN 694
            LVAEV+KV+ +P+L++KFFHWAGKQKG+KH FA YNA AY LNR+N FRAADQ+PELM 
Sbjct: 128 DLVAEVLKVENNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELME 187

Query: 695 MQGKAPTEKQFEILIRMHADAHRGLRVYYVYEKMKKFGVKPRVFLYNRILDALVKTG 865
            QGK PTEKQFEILIRMH+DA+RGLRVYYVY+KM KFGVKPRVFLYNRI+D+L+KTG
Sbjct: 188 AQGKPPTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTG 244


>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1128

 Score =  320 bits (821), Expect = 2e-85
 Identities = 155/236 (65%), Positives = 192/236 (81%), Gaps = 5/236 (2%)
 Frame = +2

Query: 170  KMPPQS-PPNKVYFYYGHRKPSQNRPTVHGGLFTNRRTVNPDKKAILTQPKNFNLENWDP 346
            KMPPQS PP K YF+YGHRKPSQNRP V GGLF+NR+ + P        P  F+L+NWDP
Sbjct: 443  KMPPQSLPPPKPYFFYGHRKPSQNRPVVRGGLFSNRQIIKPQNSIKPKNPVPFDLQNWDP 502

Query: 347  DSP---QLSPPTTDPSAHFFSVAQTLSPIARYIVDSFRKHS-QWGPQIVSDLNKLRRVTP 514
             +P     SPP +   +   +++Q LSPI+R+I D+FRK+S +WGP +V++L KLRRVTP
Sbjct: 503  QNPCPSSKSPPLSQNHS-LSTLSQRLSPISRFIRDAFRKNSNKWGPPVVAELRKLRRVTP 561

Query: 515  KLVAEVIKVQTDPRLSSKFFHWAGKQKGYKHDFACYNALAYCLNRNNQFRAADQVPELMN 694
             LV+EV+KV+ DP L+S+FFHWAGKQKGY+H+FA YNA AYCLNR++ FRAADQ+PELM+
Sbjct: 562  DLVSEVLKVENDPHLASQFFHWAGKQKGYRHNFASYNAYAYCLNRSSFFRAADQLPELMD 621

Query: 695  MQGKAPTEKQFEILIRMHADAHRGLRVYYVYEKMKKFGVKPRVFLYNRILDALVKT 862
             QGK PTEKQFEILIRMH+DA+RGLRVY+VY+KMKKFGVKPR FLYNRI+DAL+KT
Sbjct: 622  SQGKPPTEKQFEILIRMHSDANRGLRVYHVYQKMKKFGVKPRAFLYNRIMDALIKT 677


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  317 bits (811), Expect = 3e-84
 Identities = 157/239 (65%), Positives = 187/239 (78%), Gaps = 8/239 (3%)
 Frame = +2

Query: 173 MPPQSP--PNKVYFYYGHRKPSQNRPTVHGGLFTNRRTVNPDKKAILTQPKNFNLENWDP 346
           MPPQ+P  PNK YF+YGHRKPSQNRPTV GGLF+NR+T+ P K        +F ++ WDP
Sbjct: 1   MPPQTPTPPNKFYFFYGHRKPSQNRPTVRGGLFSNRKTLTPPKPKSTKPTNSFQIQKWDP 60

Query: 347 ---DSPQLSPPTTDPSAHF-FSVAQTLSPIARYIVDSFRKHSQ-WGPQIVSDLNKLRRVT 511
                P    P+  PS    FS +  LSPIAR+I+D+FRK++  WGP +V++LNKLRRVT
Sbjct: 61  HFLSQPNSPSPSPSPSPEATFSASLRLSPIARFILDAFRKNNNNWGPPVVTELNKLRRVT 120

Query: 512 PKLVAEVIKVQTDPRLSSKFFHWAGKQKGYKHDFACYNALAYCLNRNNQFRAADQVPELM 691
           P LVAEV+KVQT+P L+ KFFHW  KQKGY H+FA YNA  YCLNR N FRAADQ+PELM
Sbjct: 121 PTLVAEVLKVQTNPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELM 180

Query: 692 NMQGKAPTEKQFEILIRMHADAHRGLRVYYVYEKMK-KFGVKPRVFLYNRILDALVKTG 865
           + QGK P+EKQFEILIRMH+DA RGLRVY+VY+KM+ KFGVKPRVFLYNRI+DALVKTG
Sbjct: 181 DAQGKPPSEKQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTG 239