BLASTX nr result

ID: Bupleurum21_contig00017487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017487
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   298   5e-79
emb|CBI16596.3| unnamed protein product [Vitis vinifera]              296   3e-78
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   289   3e-76
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...   283   3e-74
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi...   283   3e-74

>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  298 bits (764), Expect = 5e-79
 Identities = 140/223 (62%), Positives = 177/223 (79%)
 Frame = +3

Query: 3    HAVCSSVWKNAGGQLSFLKHAVSVSPEVFSFAHSGRQLAYIDPVNGHKFHLGHANHAWXX 182
            HA+  S+WKN  GQLSFLKHAV   PEVF+FAHSGRQL YID ++GHK  +GH+NHAW  
Sbjct: 363  HAIYGSLWKNTEGQLSFLKHAVLAPPEVFTFAHSGRQLNYIDALHGHKLQVGHSNHAWVC 422

Query: 183  XXXXXXXXXXAERGHAGSVRAMLEYPLKHCPEILLLGMASISTAYNLLQYEVYSAVFPDL 362
                      AERGHA SVR+MLEYPLKHCPE+LLLGM+ I+TAY+LLQYEV   VFP +
Sbjct: 423  LDLLDMLCQLAERGHASSVRSMLEYPLKHCPELLLLGMSHINTAYSLLQYEVSFMVFPLI 482

Query: 363  LKSTTGASVILHLWHVNPSILLRGCIDAFSVDQDNITKVLDLCHELKILSLVLEMVPFSF 542
            +KS  G+ ++L+LWH+NP+++LRG +DA +V+ + +T++LD C ELKILS VL+M+PF  
Sbjct: 483  IKSAAGSGMMLYLWHLNPNLVLRGFVDAHNVEPNIMTEILDACQELKILSSVLDMIPFPS 542

Query: 543  GIRMAALASQKELINLETWLGTNLNTYKDTLFKECLKFIKEVQ 671
            GIR+AALAS+KELI LE WLG NL TYKD+ F+ECLKF+KE+Q
Sbjct: 543  GIRLAALASRKELIGLEKWLGNNLITYKDSFFEECLKFLKEIQ 585


>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score =  296 bits (757), Expect = 3e-78
 Identities = 138/223 (61%), Positives = 172/223 (77%)
 Frame = +3

Query: 3    HAVCSSVWKNAGGQLSFLKHAVSVSPEVFSFAHSGRQLAYIDPVNGHKFHLGHANHAWXX 182
            HA+C SVWKN  GQLSFLK+AVS  PE+F+FAHS RQLAY+D V GHKF LGHANHAW  
Sbjct: 394  HAICGSVWKNVQGQLSFLKYAVSAPPEIFTFAHSARQLAYVDAVYGHKFQLGHANHAWLC 453

Query: 183  XXXXXXXXXXAERGHAGSVRAMLEYPLKHCPEILLLGMASISTAYNLLQYEVYSAVFPDL 362
                      AERGH  SV++MLEYPLKH PEILLLG+A I+TAYN+LQYEV S  FP +
Sbjct: 454  LDLLSVLCQLAERGHGSSVQSMLEYPLKHYPEILLLGLAHINTAYNVLQYEVSSIAFPLI 513

Query: 363  LKSTTGASVILHLWHVNPSILLRGCIDAFSVDQDNITKVLDLCHELKILSLVLEMVPFSF 542
            + ++ G  +ILHLWHVNP ++LRG +D   +D +N+T++LD+C ELKILS VLE++P  F
Sbjct: 514  VGNSMGNGMILHLWHVNPDLVLRGFVDVHIIDPNNMTRILDICKELKILSQVLELIPSPF 573

Query: 543  GIRMAALASQKELINLETWLGTNLNTYKDTLFKECLKFIKEVQ 671
             IR+AALAS+ EL++LE WL  NL TYKD  F+ECLKF++E+Q
Sbjct: 574  SIRLAALASRHELVDLEKWLPDNLTTYKDIFFEECLKFLREIQ 616


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  289 bits (740), Expect = 3e-76
 Identities = 130/221 (58%), Positives = 172/221 (77%)
 Frame = +3

Query: 3    HAVCSSVWKNAGGQLSFLKHAVSVSPEVFSFAHSGRQLAYIDPVNGHKFHLGHANHAWXX 182
            HA+C S+WKN  GQLSFLK+AVS  PE+F+FAHSGRQLAY+D +NGHK   GHANHAW  
Sbjct: 371  HAICGSIWKNTEGQLSFLKYAVSAPPEIFTFAHSGRQLAYVDAINGHKLQNGHANHAWLC 430

Query: 183  XXXXXXXXXXAERGHAGSVRAMLEYPLKHCPEILLLGMASISTAYNLLQYEVYSAVFPDL 362
                      AE+GHA  VR + +YPLKHCPE+LLLG+A I+TAYNLLQ EV   VFP +
Sbjct: 431  LDLLDVLCQLAEKGHASIVRLIFDYPLKHCPEVLLLGLAHINTAYNLLQQEVSLIVFPMI 490

Query: 363  LKSTTGASVILHLWHVNPSILLRGCIDAFSVDQDNITKVLDLCHELKILSLVLEMVPFSF 542
            LKS  G+ +ILHLWHVNP+++LRG ID+ + D D+I +++++C ELKILS V+E++P+ +
Sbjct: 491  LKSAVGSGMILHLWHVNPNLVLRGFIDSQNNDADSIVRIVEICQELKILSSVVEIIPYYY 550

Query: 543  GIRMAALASQKELINLETWLGTNLNTYKDTLFKECLKFIKE 665
             IR+AA+AS+KE ++LE WL +NL TYK+  F+ECLKF+K+
Sbjct: 551  SIRLAAVASRKEFLDLEKWLSSNLTTYKEAFFEECLKFLKD 591


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score =  283 bits (723), Expect = 3e-74
 Identities = 129/223 (57%), Positives = 168/223 (75%)
 Frame = +3

Query: 3    HAVCSSVWKNAGGQLSFLKHAVSVSPEVFSFAHSGRQLAYIDPVNGHKFHLGHANHAWXX 182
            HA+  SVWKN  GQLSFLKHAV   PE+F+FAHS RQLAY+D +NGHK   GHANHAW  
Sbjct: 367  HAIYGSVWKNTEGQLSFLKHAVYAPPEIFTFAHSARQLAYVDAINGHKLQNGHANHAWLC 426

Query: 183  XXXXXXXXXXAERGHAGSVRAMLEYPLKHCPEILLLGMASISTAYNLLQYEVYSAVFPDL 362
                      AE+GHA  V ++L+YPLK CPEILLLGMA ++T YNL Q EV   VFP +
Sbjct: 427  IDLLDVLCQLAEKGHASVVWSILDYPLKRCPEILLLGMAHVNTTYNLFQREVSMIVFPMI 486

Query: 363  LKSTTGASVILHLWHVNPSILLRGCIDAFSVDQDNITKVLDLCHELKILSLVLEMVPFSF 542
            +KS  G+ +ILHLWH+NP+++LRG +D+ ++D D+I K++D+C ELKILS V+E++P  +
Sbjct: 487  VKSDAGSGMILHLWHINPNLVLRGFMDSQNIDVDSIAKIVDICQELKILSSVVEIIPSYY 546

Query: 543  GIRMAALASQKELINLETWLGTNLNTYKDTLFKECLKFIKEVQ 671
             +R+AA+AS KE+++LE WL  NL TYKD  F+ECLKF+KEVQ
Sbjct: 547  SVRLAAVASSKEILDLEKWLSNNLTTYKDAFFEECLKFLKEVQ 589


>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520704|gb|AET01158.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2418

 Score =  283 bits (723), Expect = 3e-74
 Identities = 129/223 (57%), Positives = 168/223 (75%)
 Frame = +3

Query: 3    HAVCSSVWKNAGGQLSFLKHAVSVSPEVFSFAHSGRQLAYIDPVNGHKFHLGHANHAWXX 182
            HA+  SVWKN  GQLSFLKHAV   PE+F+FAHS RQLAY+D +NGHK   GHANHAW  
Sbjct: 367  HAIYGSVWKNTEGQLSFLKHAVYAPPEIFTFAHSARQLAYVDAINGHKLQNGHANHAWLC 426

Query: 183  XXXXXXXXXXAERGHAGSVRAMLEYPLKHCPEILLLGMASISTAYNLLQYEVYSAVFPDL 362
                      AE+GHA  V ++L+YPLK CPEILLLGMA ++T YNL Q EV   VFP +
Sbjct: 427  IDLLDVLCQLAEKGHASVVWSILDYPLKRCPEILLLGMAHVNTTYNLFQREVSMIVFPMI 486

Query: 363  LKSTTGASVILHLWHVNPSILLRGCIDAFSVDQDNITKVLDLCHELKILSLVLEMVPFSF 542
            +KS  G+ +ILHLWH+NP+++LRG +D+ ++D D+I K++D+C ELKILS V+E++P  +
Sbjct: 487  VKSDAGSGMILHLWHINPNLVLRGFMDSQNIDVDSIAKIVDICQELKILSSVVEIIPSYY 546

Query: 543  GIRMAALASQKELINLETWLGTNLNTYKDTLFKECLKFIKEVQ 671
             +R+AA+AS KE+++LE WL  NL TYKD  F+ECLKF+KEVQ
Sbjct: 547  SVRLAAVASSKEILDLEKWLSNNLTTYKDAFFEECLKFLKEVQ 589


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