BLASTX nr result

ID: Bupleurum21_contig00017481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017481
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143124.1| PREDICTED: uncharacterized protein C20orf24 ...   172   4e-41
ref|XP_002298350.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-41
ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 ...   171   1e-40
ref|XP_002314175.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-40
ref|XP_004145291.1| PREDICTED: uncharacterized protein C20orf24 ...   168   1e-39

>ref|XP_004143124.1| PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis
           sativus] gi|449518332|ref|XP_004166196.1| PREDICTED:
           uncharacterized protein C20orf24 homolog [Cucumis
           sativus]
          Length = 129

 Score =  172 bits (437), Expect = 4e-41
 Identities = 87/128 (67%), Positives = 95/128 (74%)
 Frame = -1

Query: 598 KTKMSVKDRKLRNQSHQNGHISPFNFGKLVDPEASWDQDQLGDVLHWIRQIVAVICGLLC 419
           K    VK    ++Q HQNGH++PF   KL+DPEASWD+DQLGDVLHWIRQ VAVI GLL 
Sbjct: 2   KEAKPVKFNLHQHQDHQNGHLAPFKLAKLIDPEASWDKDQLGDVLHWIRQAVAVILGLLW 61

Query: 418 GAIPLVGGXXXXXXXXXXXXXVYCYYAMMLKVDEEEFGGRGALLQEGLFASITLFLLTWT 239
           G+IPLVGG             VY YYAM+LKVDEEEFGG GALLQEGLFASITLFLL W 
Sbjct: 62  GSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWI 121

Query: 238 LVYSLRHF 215
           LVYSL HF
Sbjct: 122 LVYSLAHF 129


>ref|XP_002298350.1| predicted protein [Populus trichocarpa] gi|222845608|gb|EEE83155.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  172 bits (437), Expect = 4e-41
 Identities = 79/128 (61%), Positives = 96/128 (75%)
 Frame = -1

Query: 598 KTKMSVKDRKLRNQSHQNGHISPFNFGKLVDPEASWDQDQLGDVLHWIRQIVAVICGLLC 419
           K+   + +   + Q HQNGH+SPF   KL+DPEASWD+DQLGDVLHWIRQ+VA++CGLL 
Sbjct: 5   KSSAKLNNNNNQQQQHQNGHLSPFKLAKLLDPEASWDKDQLGDVLHWIRQVVALVCGLLW 64

Query: 418 GAIPLVGGXXXXXXXXXXXXXVYCYYAMMLKVDEEEFGGRGALLQEGLFASITLFLLTWT 239
           GAIPLVGG             +Y YY M+LK+DE++FGG G LLQEGLFASITLFLL+W 
Sbjct: 65  GAIPLVGGIWIALFLLISSGIIYVYYGMILKIDEDDFGGHGTLLQEGLFASITLFLLSWI 124

Query: 238 LVYSLRHF 215
           L+YSL HF
Sbjct: 125 LMYSLAHF 132


>ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 homolog [Vitis
           vinifera] gi|297746059|emb|CBI16115.3| unnamed protein
           product [Vitis vinifera]
          Length = 129

 Score =  171 bits (433), Expect = 1e-40
 Identities = 83/128 (64%), Positives = 96/128 (75%)
 Frame = -1

Query: 598 KTKMSVKDRKLRNQSHQNGHISPFNFGKLVDPEASWDQDQLGDVLHWIRQIVAVICGLLC 419
           K   SVK    ++   QNGH+SPF F KL+DPEASWD+DQLGDVLHWIRQ VA++CGLL 
Sbjct: 2   KEGKSVKSNGQQHHHDQNGHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQAVALVCGLLW 61

Query: 418 GAIPLVGGXXXXXXXXXXXXXVYCYYAMMLKVDEEEFGGRGALLQEGLFASITLFLLTWT 239
           G+IPLVGG             +Y YYA++LK+DEE+FGG GALLQEGLFASITLFLL W 
Sbjct: 62  GSIPLVGGIWIILFLLISSGIIYGYYAIILKIDEEDFGGHGALLQEGLFASITLFLLAWI 121

Query: 238 LVYSLRHF 215
           LVYSL HF
Sbjct: 122 LVYSLVHF 129


>ref|XP_002314175.1| predicted protein [Populus trichocarpa] gi|222850583|gb|EEE88130.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  168 bits (426), Expect = 7e-40
 Identities = 82/133 (61%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
 Frame = -1

Query: 604 IKKTKMSVKDRKLRNQS---HQNGHISPFNFGKLVDPEASWDQDQLGDVLHWIRQIVAVI 434
           +K+ K + K     NQ    HQNGH SP  F KL+DPEASWD+DQLGDVLHWIRQ+VA++
Sbjct: 1   MKEGKSAAKLNNSNNQQQHQHQNGHFSPSKFAKLLDPEASWDKDQLGDVLHWIRQVVALV 60

Query: 433 CGLLCGAIPLVGGXXXXXXXXXXXXXVYCYYAMMLKVDEEEFGGRGALLQEGLFASITLF 254
           CG+L G IPLVGG             +Y YYAM+LK+DE++FGG  ALLQEGLFASITLF
Sbjct: 61  CGILWGTIPLVGGIWIGLFLLISSGIIYGYYAMILKIDEDDFGGHSALLQEGLFASITLF 120

Query: 253 LLTWTLVYSLRHF 215
           LL+W LVYSL HF
Sbjct: 121 LLSWILVYSLAHF 133


>ref|XP_004145291.1| PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis
           sativus] gi|449473539|ref|XP_004153910.1| PREDICTED:
           uncharacterized protein C20orf24 homolog [Cucumis
           sativus] gi|449515665|ref|XP_004164869.1| PREDICTED:
           uncharacterized protein C20orf24 homolog [Cucumis
           sativus]
          Length = 126

 Score =  168 bits (425), Expect = 1e-39
 Identities = 80/122 (65%), Positives = 91/122 (74%)
 Frame = -1

Query: 580 KDRKLRNQSHQNGHISPFNFGKLVDPEASWDQDQLGDVLHWIRQIVAVICGLLCGAIPLV 401
           K  K+ +Q  QNGH+ PF   KL DPE SWD+DQLGDVLHW+RQ VA++CGLL G+IPLV
Sbjct: 5   KSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLV 64

Query: 400 GGXXXXXXXXXXXXXVYCYYAMMLKVDEEEFGGRGALLQEGLFASITLFLLTWTLVYSLR 221
           GG             +Y YYAM+LKVDEEEFGG G LLQEGLFASITLFLL WTL+YSL 
Sbjct: 65  GGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTLIYSLG 124

Query: 220 HF 215
           HF
Sbjct: 125 HF 126


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