BLASTX nr result

ID: Bupleurum21_contig00017472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017472
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ...   284   2e-74
ref|XP_002520865.1| Transcription factor RF2b, putative [Ricinus...   274   3e-71
ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [V...   268   1e-69
emb|CBI15815.3| unnamed protein product [Vitis vinifera]              268   1e-69
emb|CAN65087.1| hypothetical protein VITISV_035032 [Vitis vinifera]   268   2e-69

>ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera]
          Length = 359

 Score =  284 bits (727), Expect = 2e-74
 Identities = 152/210 (72%), Positives = 171/210 (81%)
 Frame = -2

Query: 1048 SIEAKKAMAPDKLAELWNLDPKRAKRILANRQSAARSKERKARYISELERKAQTLQTEAT 869
            +IEAKKAMAPDKLAELW LDPKRAKRILANRQSAARSKERKARYI ELERK QTLQTEAT
Sbjct: 137  TIEAKKAMAPDKLAELWTLDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEAT 196

Query: 868  TLSAQLTLFQRDTTGLTNENTELKLRLQAMEQQAQLRDALNDALKQEVERLRVATGEMST 689
            TLSAQLTLFQRDTTGLT ENTELKLRLQAMEQQAQLRDALN+ALK+EVERL++ATGE+ T
Sbjct: 197  TLSAQLTLFQRDTTGLTTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEIMT 256

Query: 688  HSDAYDLGMSRGSFYQSGFSPHYTQPGTSDPLNEQLTRFYSVQSSMSNQQQHPMLAAAAN 509
             SDAY+LGM    + QS F  H +QPG S+  N Q+ +F+   S+M     H  L  AA+
Sbjct: 257  SSDAYNLGMHHVPYTQSSFFSHQSQPGPSESQNIQMPQFHPFPSNMLT--HHQPLLGAAH 314

Query: 508  AQILSETLRHDPLGRFQGLDISNRGSHLVK 419
            +  LS+ L+ DPLGR QGLDIS+RG  LVK
Sbjct: 315  SNALSDMLQQDPLGRLQGLDISSRGPSLVK 344


>ref|XP_002520865.1| Transcription factor RF2b, putative [Ricinus communis]
            gi|223539996|gb|EEF41574.1| Transcription factor RF2b,
            putative [Ricinus communis]
          Length = 355

 Score =  274 bits (700), Expect = 3e-71
 Identities = 148/215 (68%), Positives = 170/215 (79%)
 Frame = -2

Query: 1063 NSSTQSIEAKKAMAPDKLAELWNLDPKRAKRILANRQSAARSKERKARYISELERKAQTL 884
            +S  +SIEAKKAMAPDKLAELW+LDPKRAKRI+ANRQSAARSKERKARYISELERK QTL
Sbjct: 129  SSMLESIEAKKAMAPDKLAELWSLDPKRAKRIIANRQSAARSKERKARYISELERKVQTL 188

Query: 883  QTEATTLSAQLTLFQRDTTGLTNENTELKLRLQAMEQQAQLRDALNDALKQEVERLRVAT 704
            QTEATTLSAQLTLFQRDTTGLT ENTELKLRLQAMEQQA LRDALNDALK+EVERL+ AT
Sbjct: 189  QTEATTLSAQLTLFQRDTTGLTTENTELKLRLQAMEQQAHLRDALNDALKKEVERLKFAT 248

Query: 703  GEMSTHSDAYDLGMSRGSFYQSGFSPHYTQPGTSDPLNEQLTRFYSVQSSMSNQQQHPML 524
            GEM T +D+Y LGM+   + QS F P  +QP   +  N Q+ +F+  QS+M     H  +
Sbjct: 249  GEMMTPTDSYHLGMNHMPYTQSSFFPPQSQPRPVNTQNMQMPQFHPFQSNMLT--SHQAI 306

Query: 523  AAAANAQILSETLRHDPLGRFQGLDISNRGSHLVK 419
            AA +++    E L  DPLGR QGLDI +R + LVK
Sbjct: 307  AAPSHSHAFPEMLPLDPLGRLQGLDIGSRSTVLVK 341


>ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [Vitis vinifera]
          Length = 344

 Score =  268 bits (686), Expect = 1e-69
 Identities = 145/209 (69%), Positives = 168/209 (80%)
 Frame = -2

Query: 1045 IEAKKAMAPDKLAELWNLDPKRAKRILANRQSAARSKERKARYISELERKAQTLQTEATT 866
            ++AKKAM PDKLAELWN+DPKRAKRILANRQSAARSKERKARYI ELERK QTLQTEATT
Sbjct: 126  MDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEATT 185

Query: 865  LSAQLTLFQRDTTGLTNENTELKLRLQAMEQQAQLRDALNDALKQEVERLRVATGEMSTH 686
            LSAQLTL+QRDTTGL+ ENTELKLRLQAMEQQAQLRDALN ALKQEVERL++ATGE+ + 
Sbjct: 186  LSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNTALKQEVERLKIATGEIMSP 245

Query: 685  SDAYDLGMSRGSFYQSGFSPHYTQPGTSDPLNEQLTRFYSVQSSMSNQQQHPMLAAAANA 506
            S+++DLGM +  +  S F     Q G +   N QL  F+   S+MS Q   P+     N+
Sbjct: 246  SESFDLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPI-----NS 300

Query: 505  QILSETLRHDPLGRFQGLDISNRGSHLVK 419
            Q +SE L++DPLGR QGLDIS+RGSHLVK
Sbjct: 301  QPISEILQNDPLGRLQGLDISSRGSHLVK 329


>emb|CBI15815.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  268 bits (686), Expect = 1e-69
 Identities = 145/209 (69%), Positives = 168/209 (80%)
 Frame = -2

Query: 1045 IEAKKAMAPDKLAELWNLDPKRAKRILANRQSAARSKERKARYISELERKAQTLQTEATT 866
            ++AKKAM PDKLAELWN+DPKRAKRILANRQSAARSKERKARYI ELERK QTLQTEATT
Sbjct: 1    MDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEATT 60

Query: 865  LSAQLTLFQRDTTGLTNENTELKLRLQAMEQQAQLRDALNDALKQEVERLRVATGEMSTH 686
            LSAQLTL+QRDTTGL+ ENTELKLRLQAMEQQAQLRDALN ALKQEVERL++ATGE+ + 
Sbjct: 61   LSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNTALKQEVERLKIATGEIMSP 120

Query: 685  SDAYDLGMSRGSFYQSGFSPHYTQPGTSDPLNEQLTRFYSVQSSMSNQQQHPMLAAAANA 506
            S+++DLGM +  +  S F     Q G +   N QL  F+   S+MS Q   P+     N+
Sbjct: 121  SESFDLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPI-----NS 175

Query: 505  QILSETLRHDPLGRFQGLDISNRGSHLVK 419
            Q +SE L++DPLGR QGLDIS+RGSHLVK
Sbjct: 176  QPISEILQNDPLGRLQGLDISSRGSHLVK 204


>emb|CAN65087.1| hypothetical protein VITISV_035032 [Vitis vinifera]
          Length = 342

 Score =  268 bits (684), Expect = 2e-69
 Identities = 145/209 (69%), Positives = 167/209 (79%)
 Frame = -2

Query: 1045 IEAKKAMAPDKLAELWNLDPKRAKRILANRQSAARSKERKARYISELERKAQTLQTEATT 866
            ++AKKAM PDKLAELWN+DPKRAKRILANRQSAARSKERKARYI ELERK QTLQTEATT
Sbjct: 124  MDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEATT 183

Query: 865  LSAQLTLFQRDTTGLTNENTELKLRLQAMEQQAQLRDALNDALKQEVERLRVATGEMSTH 686
            LSAQLTL+QRDTTGL+ ENTELKLRLQAMEQQAQLRDALN ALKQEVERL++ATGE+ + 
Sbjct: 184  LSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNTALKQEVERLKIATGEIMSP 243

Query: 685  SDAYDLGMSRGSFYQSGFSPHYTQPGTSDPLNEQLTRFYSVQSSMSNQQQHPMLAAAANA 506
            S+++DLGM    +  S F     Q G +   N QL  F+   S+MS Q   P+     N+
Sbjct: 244  SESFDLGMQXMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPI-----NS 298

Query: 505  QILSETLRHDPLGRFQGLDISNRGSHLVK 419
            Q +SE L++DPLGR QGLDIS+RGSHLVK
Sbjct: 299  QPISEILQNDPLGRLQGLDISSRGSHLVK 327


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