BLASTX nr result
ID: Bupleurum21_contig00017436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00017436
(1788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit... 580 e-163
ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|2... 550 e-154
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu... 547 e-153
ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Gly... 546 e-153
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly... 533 e-149
>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
Length = 1131
Score = 580 bits (1495), Expect = e-163
Identities = 314/592 (53%), Positives = 404/592 (68%), Gaps = 33/592 (5%)
Frame = -3
Query: 1678 LPKASNVAFTSMPTMHVNED----------------------LVLRSCPEPVAYDKSIVN 1565
L KAS+VAFTS+PTMH+NE + +SCP P+ ++SI +
Sbjct: 86 LHKASDVAFTSLPTMHLNEQALHAEVGSMNNQHIFPSDPSGGMCSKSCPVPIDCEQSIQS 145
Query: 1564 SNARNEFHLSQPTDSQAQRRYFATYWTNDVVTGALEKGDVF*ALFRVNAHNRLEAYCNVE 1385
+N Q + AQR+YF +W+ +VV ALEKG+VF A FRVNA+NRLEAYC +E
Sbjct: 146 FTNKNVLSPYQD-EGCAQRKYFTPHWSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIE 204
Query: 1384 GVPTDILISGLFAQNRAVEGDVVVIKIDPLSSWTKMKGSHGASCNSAVGDVGDLVPGATV 1205
GV TD+LISGL +QNRAVEGD+V +K+DP S W++MKGS N+ + + +L+ T
Sbjct: 205 GVKTDVLISGLASQNRAVEGDIVAVKVDPFSLWSRMKGSTVFPNNAGLTEDHNLLSDVTF 264
Query: 1204 AVGNNCKGKQNVDMNCENDSCRN---LLEK-FHDESTTYLVENGNPEPVGLVGNSCVNG- 1040
VG++ KGK VD+NC+ RN L +K F E + EN + EP+G ++ VNG
Sbjct: 265 -VGDSWKGKGKVDVNCDFGHERNHFLLHDKGFPYEDNAFSAENISQEPMG---HNHVNGH 320
Query: 1039 ------TSLIGCSSEQDDIVNAMQRLCAITSAYPLKRPTGKVVAIVEKSRRRDGVVGFLD 878
S + C E+ ++ ++++++CA +++P KRPTG VVAI+E+S RR VVGFL
Sbjct: 321 HPPVFGPSHVSCFGERSNM-DSLEKICAAINSFPSKRPTGSVVAIIERSPRRVAVVGFLS 379
Query: 877 TKQWVPSRVNYTXXXXXXXXXXXXXSTEYIPFIPTDSKFPKMMVPVKSLPDYIQKRLEVG 698
KQW+ SRV + +EYI PTD KFPKM+VPVK L D I+KRLE G
Sbjct: 380 VKQWLSSRVLHRKGTKMNKTYLSLSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLEDG 439
Query: 697 DATVKTELVAARIVDWREDDNAPEAQVIRVFGCGGDVEPHVAAILFENAIHFCEFSPEIL 518
DA+++ ELVAA+I DW E+ + P A V+ +FG GG++EP +AAILFENAI EFSPE L
Sbjct: 440 DASMEMELVAAQISDWGEESSLPLAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSPESL 499
Query: 517 SCLPSVTWTVPLEEYQTRRDIRNLCVFTIDPASATDLDDALSVERLSTGIYRVGVHIADA 338
SCLP + W VP EE + RRD+RNLC+FTIDP++ATDLDDALSVE+LS G +RVGVHIADA
Sbjct: 500 SCLPHIPWKVPQEEIERRRDLRNLCIFTIDPSTATDLDDALSVEKLSGGNFRVGVHIADA 559
Query: 337 SYFVLPATALDVEAQFRSTSVYLLRRKLSMLPSLLSENLGSLNPGVERLTFSIFWDINPS 158
SYFVLP LD EAQ RSTSVYLL+ KL MLP LLSENLGSL PGV+RL FSIFWDIN +
Sbjct: 560 SYFVLPDGVLDREAQSRSTSVYLLQHKLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLA 619
Query: 157 GEVLDRWVGRTIIKSCCKLSYEHAQAIIDDKYDVENFSASENGLPHVHGQFQ 2
G+V+DRW+GRT+I+SCCKLSYEHAQ IID +DVE N P +HG F+
Sbjct: 620 GDVVDRWIGRTVIQSCCKLSYEHAQGIIDGMFDVEGSKILGNDCPQLHGHFK 671
>ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|222843977|gb|EEE81524.1|
predicted protein [Populus trichocarpa]
Length = 860
Score = 550 bits (1418), Expect = e-154
Identities = 303/569 (53%), Positives = 376/569 (66%), Gaps = 14/569 (2%)
Frame = -3
Query: 1666 SNVAFTSMPTMHVNE---DLVL---------RSCPEPVAYDKSIVNSNARNEFHLSQPTD 1523
S +A++SMPTMHVNE DLVL +SC EP IV + +
Sbjct: 1 SRIAYSSMPTMHVNEQQEDLVLSDLDGSMLAKSCTEP------IVGGGPHGKLLPFHQFE 54
Query: 1522 SQAQRRYFATYWTNDVVTGALEKGDVF*ALFRVNAHNRLEAYCNVEGVPTDILISGLFAQ 1343
QAQ + FA YW+ + V ALEKGDVF LFRVNAHNRLEAYC +EGVPTD+LISG+ AQ
Sbjct: 55 GQAQSKIFAPYWSTETVNEALEKGDVFKVLFRVNAHNRLEAYCKIEGVPTDVLISGIAAQ 114
Query: 1342 NRAVEGDVVVIKIDPLSSWTKMKGSHGASCNSAVGDVGDLVP--GATVAVGNNCKGKQNV 1169
NRA++GDVVVI++DPLS WTKMKGS+ S N D + G GN+ ++ +
Sbjct: 115 NRAMDGDVVVIEVDPLSFWTKMKGSNVPSNNPTAEDSNLHLEANGKCADFGNSLVPQKGI 174
Query: 1168 DMNCENDSCRNLLEKFHDESTTYLVENGNPEPVGLVGNSCVNGTSLIGCSSEQDDIVNAM 989
+ + +C E HD NG + + +SL S+ QD++ N++
Sbjct: 175 --HYDETACAG--EVVHDNYV-----NGY--------HQSASESSLAVPSTGQDEVSNSV 217
Query: 988 QRLCAITSAYPLKRPTGKVVAIVEKSRRRDGVVGFLDTKQWVPSRVNYTXXXXXXXXXXX 809
R+CA+ S YP KRPTG+VVAIVEKS RRD +VGFL+ KQW R
Sbjct: 218 GRICAMLSLYPSKRPTGRVVAIVEKSPRRDVIVGFLNVKQWFYYREGCRQNAKKNKSSLS 277
Query: 808 XXSTEYIPFIPTDSKFPKMMVPVKSLPDYIQKRLEVGDATVKTELVAARIVDWREDDNAP 629
+ EYI +PTD +FPK+MV V LPD I+KRLE DATV+ ELVAA+I +W + P
Sbjct: 278 ISNREYIEMMPTDPRFPKLMVLVSVLPDCIKKRLENEDATVEMELVAAQIDNWSDKSPFP 337
Query: 628 EAQVIRVFGCGGDVEPHVAAILFENAIHFCEFSPEILSCLPSVTWTVPLEEYQTRRDIRN 449
EA V +FG G ++E + AIL ENAI +FSPE LSCLPS TW VP +E + R+DIRN
Sbjct: 338 EAHVSCIFGRGSEMESQINAILHENAICCSKFSPESLSCLPSNTWEVPKDEIENRKDIRN 397
Query: 448 LCVFTIDPASATDLDDALSVERLSTGIYRVGVHIADASYFVLPATALDVEAQFRSTSVYL 269
LC+FTIDP+SATDLDDALSV++L G+ RVGVHIAD SYFVLP TALD+EAQFRSTSVY+
Sbjct: 398 LCIFTIDPSSATDLDDALSVQKLPNGLVRVGVHIADVSYFVLPDTALDMEAQFRSTSVYM 457
Query: 268 LRRKLSMLPSLLSENLGSLNPGVERLTFSIFWDINPSGEVLDRWVGRTIIKSCCKLSYEH 89
LRRK+ MLP LLSENLGSLNPGV+RL FSIFWD N SG V+DRW+ RT+I+SCCKLSYEH
Sbjct: 458 LRRKIPMLPPLLSENLGSLNPGVDRLAFSIFWDFNSSGNVVDRWIDRTVIQSCCKLSYEH 517
Query: 88 AQAIIDDKYDVENFSASENGLPHVHGQFQ 2
AQ I+D D E + + LP +HG F+
Sbjct: 518 AQGIVDGMIDTETCNTFGDSLPQLHGHFE 546
>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
gi|223546865|gb|EEF48362.1| RNA binding protein, putative
[Ricinus communis]
Length = 1099
Score = 547 bits (1409), Expect = e-153
Identities = 307/633 (48%), Positives = 401/633 (63%), Gaps = 39/633 (6%)
Frame = -3
Query: 1786 NRKSKQMSP--ISASTSVNEICLESLRPLNGATFHEQSLPKASNVAFTSMPTMHVNE--- 1622
NR+SKQ SP ++ +++ +S + P AF SMPTMH++E
Sbjct: 36 NRRSKQNSPNLVNGGGELSQSSRKSKNYTSSVGCFPSGQPDFDAYAFNSMPTMHISEQVE 95
Query: 1621 -----DLVL------RSCPEPVA-----YDKSIVNSNARNEFHLSQPTDSQAQRRYFATY 1490
DL + SCPEP+A +D SI N N R + FA++
Sbjct: 96 HLLPSDLSIGGQAFSNSCPEPIAGGLCPFD-SISNINTRGKI--------------FASH 140
Query: 1489 WTNDVVTGALEKGDVF*ALFRVNAHNRLEAYCNVEGVPTDILISGLFAQNRAVEGDVVVI 1310
W+ + + ALEKGD F A+F VNAHNRLEAYC +EGV TD+LISGL QNRAVEGD+VVI
Sbjct: 141 WSIEAIDEALEKGDAFKAVFHVNAHNRLEAYCKIEGVSTDVLISGLAVQNRAVEGDMVVI 200
Query: 1309 KIDPLSSWTKMKGSHGAS--------CNSAVGDVGDLVPGATVAVGNNCKGKQNVDMN-- 1160
K+DPL WTKMKGS+G S CNSAV ++ ++ G+ CKGK V+++
Sbjct: 201 KVDPLPCWTKMKGSNGPSNSIALAEDCNSAV-ELSEMASGS-------CKGKIKVEVDHD 252
Query: 1159 -CENDSCRNLLEKFHDESTTYLVENGNPE-------PVGLVGNSCVNGTSLIGCSSEQDD 1004
E+ S + H E ++ E + E +G+ + + +S G S Q +
Sbjct: 253 FAESGSFSLPQKGIHSEDSSCATEAVHQELNGSTGYNIGIGDHPSASESSNFGSSMGQHE 312
Query: 1003 IVNAMQRLCAITSAYPLKRPTGKVVAIVEKSRRRDGVVGFLDTKQWVPSRVNYTXXXXXX 824
NA+ RLC + S++P KRPTG+VVAI+E+S RRD ++GFL+ KQW R
Sbjct: 313 GANAVGRLCTMISSHPTKRPTGRVVAIIERSPRRDAIIGFLNVKQWFYCREACKKDSKKN 372
Query: 823 XXXXXXXSTEYIPFIPTDSKFPKMMVPVKSLPDYIQKRLEVGDATVKTELVAARIVDWRE 644
EYI +PTD KFPKMMV SLPD I+KRLE GDATV+ ELVAA+I +W +
Sbjct: 373 KNSSSISDREYIQLMPTDPKFPKMMVLASSLPDSIKKRLEGGDATVEMELVAAQIDNWDD 432
Query: 643 DDNAPEAQVIRVFGCGGDVEPHVAAILFENAIHFCEFSPEILSCLPSVTWTVPLEEYQTR 464
+ +P A V R+FG G ++EP ++AIL+EN I + +FSPE LSC+P +W VP EE + R
Sbjct: 433 ESPSPHAHVSRIFGRGSELEPQLSAILYENTICYSDFSPESLSCIPCDSWEVPAEEIRRR 492
Query: 463 RDIRNLCVFTIDPASATDLDDALSVERLSTGIYRVGVHIADASYFVLPATALDVEAQFRS 284
+D+RNLC+FTIDP++ATDLDDALSVERL GI RVGVHIAD SYFVLP +ALD EAQ RS
Sbjct: 493 KDLRNLCIFTIDPSTATDLDDALSVERLPNGILRVGVHIADVSYFVLPDSALDKEAQARS 552
Query: 283 TSVYLLRRKLSMLPSLLSENLGSLNPGVERLTFSIFWDINPSGEVLDRWVGRTIIKSCCK 104
TSVYLLR KL MLP LLSENLGSLNPGV+RL F+IFW++N +G+V DRW+GRT+I+SCCK
Sbjct: 553 TSVYLLRGKLPMLPPLLSENLGSLNPGVDRLAFTIFWELNSTGDVTDRWIGRTVIQSCCK 612
Query: 103 LSYEHAQAIIDDKYDVENFSASENGLPHVHGQF 5
LSY+HAQ ++D E + N LP ++G F
Sbjct: 613 LSYQHAQEMVDGVIREEACNTFGNSLPQLYGPF 645
>ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
Length = 1184
Score = 546 bits (1408), Expect = e-153
Identities = 301/630 (47%), Positives = 403/630 (63%), Gaps = 42/630 (6%)
Frame = -3
Query: 1765 SPISASTSVNEICLESLRPLNGATFHEQSLPKASNVAFTSMPTMHVNEDL------VLRS 1604
+P AS S+ SL +N + +EQ L KASNVAF S+P MH+NE + +L
Sbjct: 113 TPTHASPSLGN----SLNQVNVCSSNEQGLSKASNVAFISIPPMHINEQVEPGDLRILPM 168
Query: 1603 CPEPVAYDKSIVNSNARNEFHLSQPTDSQ--------AQRRYFATYWTNDVVTGALEKGD 1448
C + + + R +++ DS Q +YF+ +W+ + V LE+GD
Sbjct: 169 CGGGIDSNSFSEPTGCRGSSGINKNKDSVPCGQIGLCGQEKYFSPHWSVEAVEKELEEGD 228
Query: 1447 VF*ALFRVNAHNRLEAYCNVEGVPTDILISGLFAQNRAVEGDVVVIKIDPLSSWTKMKGS 1268
VF ALF VNAHNRLEAYC ++G+PTD+ I G+ AQNRAVEGDVV +K DPL WTKMKG
Sbjct: 229 VFKALFHVNAHNRLEAYCKIDGMPTDVFIGGIPAQNRAVEGDVVAVKFDPLPLWTKMKGP 288
Query: 1267 HGASCNSAVGDVGDLVPGATVAVGNNCKGKQNVDMNCEN------------DSCRNLLEK 1124
+G+ N+A + +L V GN CKGK VD E+ D+ +N L K
Sbjct: 289 NGSCNNTATPEGCNLTEDKEVG-GNICKGKAKVDAEYESAHGRSYPGQNKEDADQNSLYK 347
Query: 1123 ---------FHDE-----STTYLVENGNPEPVGLVGNSCV--NGTSLIGCSSEQDDIVNA 992
+D+ ST +L +G + G+ C N + CS + NA
Sbjct: 348 SYPFTETTMVYDDITSRGSTNHLDLHGMANHDSINGHHCAAPNSLKINSCSGQS----NA 403
Query: 991 MQRLCAITSAYPLKRPTGKVVAIVEKSRRRDGVVGFLDTKQWVPSRVNYTXXXXXXXXXX 812
++++C + +++P KRPTG+VVAI+E+S RR+G+VG ++ KQWV R T
Sbjct: 404 VEKMCLLVNSFPSKRPTGRVVAIIERSPRREGIVGHINVKQWVSFRD--TSKKDVKKNKN 461
Query: 811 XXXSTEYIPFIPTDSKFPKMMVPVKSLPDYIQKRLEVGDATVKTELVAARIVDWREDDNA 632
EYI IPTD KFP MM+ V+ LP I+KR++ GD T++ +LVA +I DW E+
Sbjct: 462 LISEHEYIQLIPTDPKFPNMMLLVRKLPKCIKKRMKSGDVTIQMDLVAVQIDDWVEESPF 521
Query: 631 PEAQVIRVFGCGGDVEPHVAAILFENAIHFCEFSPEILSCLPSVTWTVPLEEYQTRRDIR 452
PEA ++RVFG GG+V+ + AILF+NAI EFSPE LSCLP V W +PL+E Q+R D+R
Sbjct: 522 PEAHILRVFGQGGEVQTQLDAILFQNAICLSEFSPEALSCLPCVPWEIPLKEIQSRIDLR 581
Query: 451 NLCVFTIDPASATDLDDALSVERLSTGIYRVGVHIADASYFVLPATALDVEAQFRSTSVY 272
NLC+FTIDP++ATDLDDALS+E+L G YRVGVHIAD SYFVLP TALD EA+FRSTSVY
Sbjct: 582 NLCIFTIDPSTATDLDDALSIEKLPNGNYRVGVHIADVSYFVLPDTALDNEAKFRSTSVY 641
Query: 271 LLRRKLSMLPSLLSENLGSLNPGVERLTFSIFWDINPSGEVLDRWVGRTIIKSCCKLSYE 92
+L+RKL MLP+LLSEN+GSL+PGV+RL S+ DIN +G+V+DRW+GRT+I+SCCKLSYE
Sbjct: 642 MLQRKLPMLPALLSENIGSLSPGVDRLAVSMLLDINVAGDVVDRWIGRTVIQSCCKLSYE 701
Query: 91 HAQAIIDDKYDVENFSASENGLPHVHGQFQ 2
HAQ IID +D E + E+G P V+G F+
Sbjct: 702 HAQDIIDKAFDFEGSNFIEDGYPRVYGHFE 731
>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
Length = 1133
Score = 533 bits (1374), Expect = e-149
Identities = 301/659 (45%), Positives = 403/659 (61%), Gaps = 64/659 (9%)
Frame = -3
Query: 1786 NRKSKQMSPISASTSVNEI----------------------CLESLRPLNGATFHEQSLP 1673
NR+SKQ P S+ +E+ SL+ +N + +EQ L
Sbjct: 27 NRRSKQNPPSSSGVLTSEVNEAQGVSPESGKIGTPTHASPSFGSSLKQVNVCSPNEQGLS 86
Query: 1672 KASNVAFTSMPTMHVNEDLVLRSCPEPVAYDKSIVN------SNARNEFHLSQPTDS--- 1520
K+SNVAF SMP MH+NE + YD I + + R +++ DS
Sbjct: 87 KSSNVAFNSMPPMHINEQVEPGDLRIVPMYDGGIDSKSFSEPTGCRGSSVINKNKDSVPC 146
Query: 1519 -----QAQRRYFATYWTNDVVTGALEKGDVF*ALFRVNAHNRLEAYCNVEGVPTDILISG 1355
Q+ YF+ +W+ + V ALEKGD+F AL VNAHNRLEAYC ++G+ TD+ I G
Sbjct: 147 GQIGLSGQKNYFSPHWSVEAVEKALEKGDIFKALLHVNAHNRLEAYCKIDGMSTDVFIGG 206
Query: 1354 LFAQNRAVEGDVVVIKIDPLSSWTKMKGSHGASCNSAVGDVGDLVPGATVAVGNNCKGKQ 1175
+ AQNRAV+GD+V +K DPL WTKMKG +G+ N+A + +L+ GN C GK
Sbjct: 207 IPAQNRAVQGDIVAVKFDPLPLWTKMKGPNGSCNNTATLEGCNLLTEDKEVGGNICNGKA 266
Query: 1174 NVDMNCENDSCRN-------------------LLEK--FHDE-----STTYLVENGNPEP 1073
V E+ CR+ L EK +D+ ST +L +G
Sbjct: 267 KVGAEYESAHCRSYPGQNKEDADQNSSYRSYPLPEKTMVYDDITSQGSTNHLDLHGMASH 326
Query: 1072 VGLVGNSCVNGTSL--IGCSSEQDDIVNAMQRLCAITSAYPLKRPTGKVVAIVEKSRRRD 899
+ G+ C S+ CS + NA++++C + +++P KRPTG+VVAI+E+S RR+
Sbjct: 327 DSINGHHCAAPDSIKNNSCSGQS----NALEKMCLLVNSFPSKRPTGRVVAIMERSPRRE 382
Query: 898 GVVGFLDTKQWVPSRVNYTXXXXXXXXXXXXXSTEYIPFIPTDSKFPKMMVPVKSLPDYI 719
G+VG ++ KQWV R T EYI PTD KFP MM+ V+ LP+ I
Sbjct: 383 GIVGHINVKQWVSFR--DTGKKDLKKNKNLISEHEYIQLTPTDPKFPNMMLLVRKLPNCI 440
Query: 718 QKRLEVGDATVKTELVAARIVDWREDDNAPEAQVIRVFGCGGDVEPHVAAILFENAIHFC 539
+KR++ GD T++ +LVAA+I DW E+ PEA ++RVFG GG+V+ + AILF+NAI
Sbjct: 441 KKRMKSGDVTIEMDLVAAQIDDWVEESPFPEAHILRVFGRGGEVQTQLDAILFQNAICLS 500
Query: 538 EFSPEILSCLPSVTWTVPLEEYQTRRDIRNLCVFTIDPASATDLDDALSVERLSTGIYRV 359
EF PE LSCLP V W VPL+E Q+R D+RNLC+FTIDP++ATDLDDALS+E L G YRV
Sbjct: 501 EFLPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSIEELPNGNYRV 560
Query: 358 GVHIADASYFVLPATALDVEAQFRSTSVYLLRRKLSMLPSLLSENLGSLNPGVERLTFSI 179
GVHIAD SYFVLP T LD EAQFRSTSVY+L+RKL MLP+LLSEN+GSL+PG +RL S+
Sbjct: 561 GVHIADVSYFVLPDTPLDSEAQFRSTSVYMLQRKLPMLPALLSENIGSLSPGGDRLAVSM 620
Query: 178 FWDINPSGEVLDRWVGRTIIKSCCKLSYEHAQAIIDDKYDVENFSASENGLPHVHGQFQ 2
DIN +G+V+DRW+GRT+I SCCKLSYEHAQ IID +D E + SE+G P V+G F+
Sbjct: 621 LLDINLAGDVVDRWIGRTVIHSCCKLSYEHAQDIIDKAFDFEGSNFSEDGYPRVYGHFE 679