BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017435
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...   554   e-155
emb|CBI21003.3| unnamed protein product [Vitis vinifera]              554   e-155
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...   518   e-144
ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|2...   518   e-144
ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containi...   482   e-133

>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  554 bits (1428), Expect = e-155
 Identities = 263/417 (63%), Positives = 345/417 (82%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            LF +I  +G  PNKVTYSVLIEGCC  GN++KA ELY +MKL GI P+VF+VNSL+RG+L
Sbjct: 387  LFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL 446

Query: 1073 KAKLWKEALMQFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVT 894
            KA LW+EA   FD+AV+ GV N+FTYN++++ L K  KM EAC+L D+M+++G+VPNVV+
Sbjct: 447  KAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 506

Query: 893  YNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLV 714
            YN++ILG+CR+GNMD AS + +++L + LKP+V+TYSILIDG+F+KG++E+A   FDQ++
Sbjct: 507  YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566

Query: 713  SLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAIN 534
            SL +APT+FT+N I+NGLC+VG+ SEARD+LK  LE GFIP CMTYNSI++GF+KE  I+
Sbjct: 567  SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 626

Query: 533  SALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLI 354
            SALAVY EMCE G+SPNVVTYT+LI+G  KSN  DLA++ +++M  KGL LDV AY  LI
Sbjct: 627  SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686

Query: 353  DGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVP 174
            DG+CKRRDMESA++LF EL+E GLSPN +V NS+ISGF+ L++M+ ALV++KKM  D +P
Sbjct: 687  DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 746

Query: 173  SDLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
             DL TYTTLIDGLL+ G+L+ A++LY EML+ GI PD+I   VLVNGLCNKGQ+ENA
Sbjct: 747  CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 803



 Score =  226 bits (575), Expect = 1e-56
 Identities = 123/381 (32%), Positives = 214/381 (56%), Gaps = 1/381 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            L + +  +G  PN V+Y+ +I G CR GNM  A  ++  M  + ++P V   + LI G  
Sbjct: 491  LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550

Query: 1073 KAKLWKEALMQFDDAVEYGVFNV-FTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K    ++AL  FD  +   +    FT+N +I  L K  +MSEA +   + L +G +P+ +
Sbjct: 551  KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
            TYN+++ G+ ++GN+DSA  +   + E G+ P+V+TY+ LI+G  +    + A K  D++
Sbjct: 611  TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
               GL      Y+ +++G C+      A+D   +LLE G  P+ + YNS+I+GF   N +
Sbjct: 671  REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 730

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVL 357
             +AL  Y +M    +  ++ TYTTLIDGLLK      A  +  +M +KG+  D+I + VL
Sbjct: 731  EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790

Query: 356  IDGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGV 177
            ++G C +  +E+AR++  E+    ++P+ ++ N++I+G+    ++  A   H +M + G+
Sbjct: 791  VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850

Query: 176  PSDLATYTTLIDGLLQGGKLL 114
              D  TY  LI+G  +G + L
Sbjct: 851  VPDDVTYDILINGKFKGDRSL 871



 Score =  209 bits (532), Expect = 1e-51
 Identities = 134/471 (28%), Positives = 225/471 (47%), Gaps = 71/471 (15%)
 Frame = -2

Query: 1202 SVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLKAKLWKEALMQFDDAVE 1023
            ++L+    R   + + ++LY +M L+GI    F V+ ++R  LK    +EA   F +  E
Sbjct: 229  NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE 288

Query: 1022 YGV-FNVFTYNLLITTLSK-----------------------------------ESKMSE 951
             GV  +   Y+++I  + K                                   +  M E
Sbjct: 289  RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE 348

Query: 950  ACNLWDDMLSKGLVPNVVTYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILID 771
            A  L ++M++ G   N+V   +L+ GYC QGN+DSA  L   + E GL P+ +TYS+LI+
Sbjct: 349  ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 408

Query: 770  GHFRKGET-----------------------------------EQAFKYFDQLVSLGLAP 696
            G    G                                     E+A K FD+ V  G+A 
Sbjct: 409  GCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA- 467

Query: 695  TNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINSALAVY 516
              FTYN +++ LC+ GK  EA   L  ++  G +P+ ++YN +I G  ++  ++ A +V+
Sbjct: 468  NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVF 527

Query: 515  TEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKR 336
            ++M    L PNVVTY+ LIDG  K  + + A+ + + M +  +      +  +I+G CK 
Sbjct: 528  SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 587

Query: 335  RDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATY 156
              M  AR+     +E+G  P+ +  NSI+ GF    ++D+AL  +++M E GV  ++ TY
Sbjct: 588  GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647

Query: 155  TTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
            T+LI+G  +  ++  A     EM   G+E DV     L++G C +  +E+A
Sbjct: 648  TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 698



 Score =  144 bits (363), Expect = 5e-32
 Identities = 87/347 (25%), Positives = 175/347 (50%)
 Frame = -2

Query: 1043 QFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVTYNNLILGYCR 864
            +FD  +++ VFN      L+    + +++  A + ++ M+ + ++P V   N L+    R
Sbjct: 183  RFDFELDHRVFNY-----LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVR 237

Query: 863  QGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVSLGLAPTNFT 684
            +  +     L   ++ +G+  D  T  +++    ++G  E+A +YF +    G+      
Sbjct: 238  RNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 297

Query: 683  YNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINSALAVYTEMC 504
            Y+ I+  +C+   ++   + L+++ E G++P   T+ S+I   V +  +  AL +  EM 
Sbjct: 298  YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357

Query: 503  ESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKRRDME 324
              G   N+V  T+L+ G     N D A+ + N +T  GL  + + Y VLI+G C   ++E
Sbjct: 358  NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 417

Query: 323  SARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATYTTLI 144
             A EL+ ++  +G+ P+    NS++ G+      + A     +  + GV +++ TY  ++
Sbjct: 418  KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMM 476

Query: 143  DGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
              L +GGK+ EA +L   M+  G+ P+V+    ++ G C KG ++ A
Sbjct: 477  SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 523


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  554 bits (1428), Expect = e-155
 Identities = 263/417 (63%), Positives = 345/417 (82%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            LF +I  +G  PNKVTYSVLIEGCC  GN++KA ELY +MKL GI P+VF+VNSL+RG+L
Sbjct: 347  LFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL 406

Query: 1073 KAKLWKEALMQFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVT 894
            KA LW+EA   FD+AV+ GV N+FTYN++++ L K  KM EAC+L D+M+++G+VPNVV+
Sbjct: 407  KAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 466

Query: 893  YNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLV 714
            YN++ILG+CR+GNMD AS + +++L + LKP+V+TYSILIDG+F+KG++E+A   FDQ++
Sbjct: 467  YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526

Query: 713  SLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAIN 534
            SL +APT+FT+N I+NGLC+VG+ SEARD+LK  LE GFIP CMTYNSI++GF+KE  I+
Sbjct: 527  SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 586

Query: 533  SALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLI 354
            SALAVY EMCE G+SPNVVTYT+LI+G  KSN  DLA++ +++M  KGL LDV AY  LI
Sbjct: 587  SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646

Query: 353  DGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVP 174
            DG+CKRRDMESA++LF EL+E GLSPN +V NS+ISGF+ L++M+ ALV++KKM  D +P
Sbjct: 647  DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 706

Query: 173  SDLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
             DL TYTTLIDGLL+ G+L+ A++LY EML+ GI PD+I   VLVNGLCNKGQ+ENA
Sbjct: 707  CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 763



 Score =  226 bits (575), Expect = 1e-56
 Identities = 123/381 (32%), Positives = 214/381 (56%), Gaps = 1/381 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            L + +  +G  PN V+Y+ +I G CR GNM  A  ++  M  + ++P V   + LI G  
Sbjct: 451  LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 510

Query: 1073 KAKLWKEALMQFDDAVEYGVFNV-FTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K    ++AL  FD  +   +    FT+N +I  L K  +MSEA +   + L +G +P+ +
Sbjct: 511  KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
            TYN+++ G+ ++GN+DSA  +   + E G+ P+V+TY+ LI+G  +    + A K  D++
Sbjct: 571  TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
               GL      Y+ +++G C+      A+D   +LLE G  P+ + YNS+I+GF   N +
Sbjct: 631  REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 690

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVL 357
             +AL  Y +M    +  ++ TYTTLIDGLLK      A  +  +M +KG+  D+I + VL
Sbjct: 691  EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750

Query: 356  IDGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGV 177
            ++G C +  +E+AR++  E+    ++P+ ++ N++I+G+    ++  A   H +M + G+
Sbjct: 751  VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810

Query: 176  PSDLATYTTLIDGLLQGGKLL 114
              D  TY  LI+G  +G + L
Sbjct: 811  VPDDVTYDILINGKFKGDRSL 831



 Score =  209 bits (532), Expect = 1e-51
 Identities = 134/471 (28%), Positives = 225/471 (47%), Gaps = 71/471 (15%)
 Frame = -2

Query: 1202 SVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLKAKLWKEALMQFDDAVE 1023
            ++L+    R   + + ++LY +M L+GI    F V+ ++R  LK    +EA   F +  E
Sbjct: 189  NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKE 248

Query: 1022 YGV-FNVFTYNLLITTLSK-----------------------------------ESKMSE 951
             GV  +   Y+++I  + K                                   +  M E
Sbjct: 249  RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE 308

Query: 950  ACNLWDDMLSKGLVPNVVTYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILID 771
            A  L ++M++ G   N+V   +L+ GYC QGN+DSA  L   + E GL P+ +TYS+LI+
Sbjct: 309  ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 368

Query: 770  GHFRKGET-----------------------------------EQAFKYFDQLVSLGLAP 696
            G    G                                     E+A K FD+ V  G+A 
Sbjct: 369  GCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA- 427

Query: 695  TNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINSALAVY 516
              FTYN +++ LC+ GK  EA   L  ++  G +P+ ++YN +I G  ++  ++ A +V+
Sbjct: 428  NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVF 487

Query: 515  TEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKR 336
            ++M    L PNVVTY+ LIDG  K  + + A+ + + M +  +      +  +I+G CK 
Sbjct: 488  SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 547

Query: 335  RDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATY 156
              M  AR+     +E+G  P+ +  NSI+ GF    ++D+AL  +++M E GV  ++ TY
Sbjct: 548  GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607

Query: 155  TTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
            T+LI+G  +  ++  A     EM   G+E DV     L++G C +  +E+A
Sbjct: 608  TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 658



 Score =  144 bits (363), Expect = 5e-32
 Identities = 87/347 (25%), Positives = 175/347 (50%)
 Frame = -2

Query: 1043 QFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVTYNNLILGYCR 864
            +FD  +++ VFN      L+    + +++  A + ++ M+ + ++P V   N L+    R
Sbjct: 143  RFDFELDHRVFNY-----LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVR 197

Query: 863  QGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVSLGLAPTNFT 684
            +  +     L   ++ +G+  D  T  +++    ++G  E+A +YF +    G+      
Sbjct: 198  RNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 257

Query: 683  YNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINSALAVYTEMC 504
            Y+ I+  +C+   ++   + L+++ E G++P   T+ S+I   V +  +  AL +  EM 
Sbjct: 258  YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 317

Query: 503  ESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKRRDME 324
              G   N+V  T+L+ G     N D A+ + N +T  GL  + + Y VLI+G C   ++E
Sbjct: 318  NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 377

Query: 323  SARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATYTTLI 144
             A EL+ ++  +G+ P+    NS++ G+      + A     +  + GV +++ TY  ++
Sbjct: 378  KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMM 436

Query: 143  DGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
              L +GGK+ EA +L   M+  G+ P+V+    ++ G C KG ++ A
Sbjct: 437  SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 483


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score =  518 bits (1333), Expect = e-144
 Identities = 243/416 (58%), Positives = 333/416 (80%)
 Frame = -2

Query: 1250 FEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLK 1071
            F++++  GP+PN+VTY+VLIE CC++GNM KA +LY +MK K I PTVF VNSLIRGFLK
Sbjct: 372  FDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431

Query: 1070 AKLWKEALMQFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVTY 891
             +  +EA   FD+AV   + N+FTYN L++ L KE KMSEA  LW  ML KGL P  V+Y
Sbjct: 432  VESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491

Query: 890  NNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVS 711
            N++ILG+CRQGN+D A+ + +++L+ GLKP+VITYSIL+DG+F+ G+TE AF  FD++V 
Sbjct: 492  NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD 551

Query: 710  LGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINS 531
              + P++FTYN  +NGLC+VG+TSEA+D LKK +E GF+P C+TYNSI++GF+KE +++S
Sbjct: 552  ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611

Query: 530  ALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLID 351
            AL  Y EMCESG+SPNV+TYTTLI+G  K+NN DLA++M+N+M NKGL LD+ AYG LID
Sbjct: 612  ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671

Query: 350  GYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPS 171
            G+CK++D+E+A  LF+EL++ GLSPN+V+ NS+ISG+++L++M+ AL   K+M  +G+  
Sbjct: 672  GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISC 731

Query: 170  DLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
            DL TYTTLIDGLL+ G+L+ A +LY+EM A GI PD+I+  VL+NGLC KGQ+ENA
Sbjct: 732  DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENA 787



 Score =  226 bits (577), Expect = 7e-57
 Identities = 124/378 (32%), Positives = 216/378 (57%), Gaps = 1/378 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            L++++  +G AP KV+Y+ +I G CR GN+  A  ++  M   G++P V   + L+ G+ 
Sbjct: 475  LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534

Query: 1073 KAKLWKEALMQFDDAVEYGVF-NVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K    + A   FD  V+  +  + FTYN+ I  L K  + SEA ++    + KG VP  +
Sbjct: 535  KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
            TYN+++ G+ ++G++ SA      + E G+ P+VITY+ LI+G  +   T+ A K  +++
Sbjct: 595  TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
             + GL      Y  +++G C+      A     +LL+ G  P+ + YNS+I+G+   N +
Sbjct: 655  RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNM 714

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVL 357
             +AL +   M   G+S ++ TYTTLIDGLLK     LA+ + ++M+ KG+  D+I Y VL
Sbjct: 715  EAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVL 774

Query: 356  IDGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGV 177
            I+G C +  +E+A+++  E+  D ++PN  + N++I+G     ++  A   H +M + G+
Sbjct: 775  INGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGL 834

Query: 176  PSDLATYTTLIDGLLQGG 123
              +  TY  LI+G ++GG
Sbjct: 835  TPNDTTYDILINGKIKGG 852



 Score =  157 bits (398), Expect = 4e-36
 Identities = 112/471 (23%), Positives = 205/471 (43%), Gaps = 70/471 (14%)
 Frame = -2

Query: 1205 YSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLKAKLWKEALMQFDDAV 1026
            Y+ L+    +   +  A   + R+    I P +  +N L+   +K  +  EA   ++  V
Sbjct: 177  YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 1025 EYGVF-NVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVTYNNLILGYCRQGNMD 849
              GV  + FT ++++    K++   EA   + +  S+G+  +   Y+ +I  +C+  +++
Sbjct: 237  LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 848  SASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVSLGLAPTNFTYNKIV 669
             A  LL ++ +KG  P   T++ +I    ++G   +A +  D++VS G+         +V
Sbjct: 297  LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356

Query: 668  NGLCRVGKTSEARDRLKKLLENGFIPDCMTY----------------------------- 576
             G C+  K   A +   K+ ENG  P+ +TY                             
Sbjct: 357  KGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNIC 416

Query: 575  ------NSIINGFV----------------------------------KENAINSALAVY 516
                  NS+I GF+                                  KE  ++ A  ++
Sbjct: 417  PTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLW 476

Query: 515  TEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKR 336
             +M + GL+P  V+Y ++I G  +  N D+A  + +DM + GL+ +VI Y +L+DGY K 
Sbjct: 477  QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 335  RDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATY 156
             D E A  +F+ ++++ + P+    N  I+G   +     A    KK  E G      TY
Sbjct: 537  GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTY 596

Query: 155  TTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
             +++DG ++ G +  A   Y EM  +G+ P+VI    L+NG C     + A
Sbjct: 597  NSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647



 Score =  148 bits (374), Expect = 2e-33
 Identities = 84/274 (30%), Positives = 140/274 (51%), Gaps = 1/274 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            + ++   +G  P  +TY+ +++G  + G++  A   YR M   G+ P V    +LI GF 
Sbjct: 580  MLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639

Query: 1073 KAKLWKEALMQFDDAVEYGV-FNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K      AL   ++    G+  ++  Y  LI    K+  +  A  L+ ++L  GL PN V
Sbjct: 640  KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSV 699

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
             YN+LI GY    NM++A  L   +L +G+  D+ TY+ LIDG  ++G    A   + ++
Sbjct: 700  IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
             + G+ P    Y  ++NGLC  G+   A+  L ++  +   P+   YN++I G  K   +
Sbjct: 760  SAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNL 819

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNN 435
              A  ++ EM + GL+PN  TY  LI+G +K  N
Sbjct: 820  QEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853



 Score =  120 bits (301), Expect = 7e-25
 Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 36/254 (14%)
 Frame = -2

Query: 1250 FEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLK 1071
            + E+   G +PN +TY+ LI G C++ N   A ++   M+ KG+E  +    +LI GF K
Sbjct: 616  YREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCK 675

Query: 1070 AKLWKEALMQFDDAVEYG------VFNVF------------------------------T 999
             +  + A   F + ++ G      ++N                                T
Sbjct: 676  KQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQT 735

Query: 998  YNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVTYNNLILGYCRQGNMDSASKLLANLL 819
            Y  LI  L KE ++  A +L+ +M +KG++P+++ Y  LI G C +G +++A K+LA + 
Sbjct: 736  YTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEME 795

Query: 818  EKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVSLGLAPTNFTYNKIVNGLCRVGKTS 639
               + P+V  Y+ LI GHF+ G  ++AF+  ++++  GL P + TY+ ++NG  + G ++
Sbjct: 796  RDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSA 855

Query: 638  EARDRLKKLLENGF 597
                 LK LL   F
Sbjct: 856  -----LKSLLSLKF 864



 Score =  107 bits (266), Expect = 8e-21
 Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 2/332 (0%)
 Frame = -2

Query: 992  LLITTLSKESKMSEACNLWDDMLS--KGLVPNVVTYNNLILGYCRQGNMDSASKLLANLL 819
            L I T S E+ + +A NL +  +S   G +PN++  +   +G  ++ + DS         
Sbjct: 125  LHILTRSSET-LKQAQNLLNRFISGDSGPMPNILVDH--FIGSTKRFDFDS--------- 172

Query: 818  EKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVSLGLAPTNFTYNKIVNGLCRVGKTS 639
                  D+  Y+ L++ + +  +   A   F++LV   + P     N ++  L +     
Sbjct: 173  ------DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIY 226

Query: 638  EARDRLKKLLENGFIPDCMTYNSIINGFVKENAINSALAVYTEMCESGLSPNVVTYTTLI 459
            EAR+  +K++  G   DC T + ++   +K+N    A   + E    G+  +   Y+ +I
Sbjct: 227  EAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVI 286

Query: 458  DGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKRRDMESARELFNELIEDGLS 279
                K+ + +LA  +  DM +KG       +  +I    K+ +M  A  L +E++  G+ 
Sbjct: 287  QAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQ 346

Query: 278  PNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATYTTLIDGLLQGGKLLEATNL 99
             N VV  +++ G+     + +AL F  KM E+G   +  TY  LI+   + G + +A +L
Sbjct: 347  MNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406

Query: 98   YTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
            YT+M    I P V +   L+ G       E A
Sbjct: 407  YTQMKNKNICPTVFIVNSLIRGFLKVESREEA 438


>ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|222855585|gb|EEE93132.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score =  518 bits (1333), Expect = e-144
 Identities = 247/417 (59%), Positives = 331/417 (79%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            LF++++  G  PN VTY+V+IE CC++GNM KA E+Y +MK K I PTVF+VNSLIRG+L
Sbjct: 351  LFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYL 410

Query: 1073 KAKLWKEALMQFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVT 894
            KA+  +EA   FD+AV  G+ NVFTYN L++ L KE KMSEAC++W+ M+ KG+ P+VV+
Sbjct: 411  KARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVS 470

Query: 893  YNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLV 714
            YNN+ILG+C+QG+MDSA+ +   +LEKGLKP++ITYS+L+DG+F+KG+TE AF  +D++ 
Sbjct: 471  YNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMR 530

Query: 713  SLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAIN 534
               +AP++FT N I+NGLC+ G+TSE++DRLKKL++ GFIP CMTYN II+GFVKE ++N
Sbjct: 531  GENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVN 590

Query: 533  SALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLI 354
            SALAVYTEMC+ G+SPNV TYT LI+G  KSNN DLA+++ ++M NKG+ LDV  Y  LI
Sbjct: 591  SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALI 650

Query: 353  DGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVP 174
            DG+C++ DM +A +L +EL E GLSPN VV +S+ISGF+ L +M+ AL  HK+M  +G+P
Sbjct: 651  DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIP 710

Query: 173  SDLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
             DL  YTTLI GLL+ GKLL A+ LY EMLA GI PD+I   VL++GLCNKGQ+ENA
Sbjct: 711  CDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENA 767



 Score =  198 bits (504), Expect = 2e-48
 Identities = 110/385 (28%), Positives = 208/385 (54%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            ++E++ R+G  P+ V+Y+ +I G C+ G+M  A  ++  M  KG++P +   + L+ G+ 
Sbjct: 455  IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514

Query: 1073 KAKLWKEALMQFDDAVEYGVF-NVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K    + A   +D      +  + FT N++I  L K  + SE+ +    ++ +G +P  +
Sbjct: 515  KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
            TYN +I G+ ++G+++SA  +   + + G+ P+V TY+ LI+G  +    + A K  D++
Sbjct: 575  TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEM 634

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
             + G+      Y  +++G CR G    A   L +L E G  P+ + Y+S+I+GF K   +
Sbjct: 635  KNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNM 694

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVL 357
             +AL ++  M   G+  ++  YTTLI GLLK      A ++  +M  KG+  D+I Y VL
Sbjct: 695  EAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVL 754

Query: 356  IDGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGV 177
            I G C +  +E+A+++  ++    ++P   + N++I+G     ++  A   H +M + G+
Sbjct: 755  IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814

Query: 176  PSDLATYTTLIDGLLQGGKLLEATN 102
              D  TY  L++G ++ G L    +
Sbjct: 815  VPDDTTYDILVNGKVKDGNLFSGAS 839



 Score =  151 bits (381), Expect = 4e-34
 Identities = 99/402 (24%), Positives = 189/402 (47%), Gaps = 1/402 (0%)
 Frame = -2

Query: 1205 YSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLKAKLWKEALMQFDDAV 1026
            ++ L+    +   +  A + +  +  K I P +  +N  +   +K  + +EA   ++   
Sbjct: 157  FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 1025 EYGVF-NVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVTYNNLILGYCRQGNMD 849
              GV  +  T +++I    +E K+ EA   + +  +KG+  +   Y+ +I   C++ +  
Sbjct: 217  SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 848  SASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLVSLGLAPTNFTYNKIV 669
            +A  LL  + +KG  P  + ++ +I    ++G+  +A K   +++S G          ++
Sbjct: 277  AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336

Query: 668  NGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINSALAVYTEMCESGLS 489
             G C+ G    A +   K+ ENG  P+ +TY  II    K   ++ A  +Y +M    +S
Sbjct: 337  KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396

Query: 488  PNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLIDGYCKRRDMESAREL 309
            P V    +LI G LK+ + + A ++ ++    G+  +V  Y  L+   CK   M  A  +
Sbjct: 397  PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSI 455

Query: 308  FNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPSDLATYTTLIDGLLQ 129
            + +++  G+ P+ V  N++I G     DMD+A     +M E G+  +L TY+ L+DG  +
Sbjct: 456  WEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFK 515

Query: 128  GGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
             G    A  LY  M    I P      +++NGLC  G+   +
Sbjct: 516  KGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557


>ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  482 bits (1240), Expect = e-133
 Identities = 221/417 (52%), Positives = 311/417 (74%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            L  EI   G  PNKVTYSVLI+GCC++GN++KA E Y  MK KGI  +V+ +NS++ G+L
Sbjct: 167  LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226

Query: 1073 KAKLWKEALMQFDDAVEYGVFNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVVT 894
            K + W+ A   F+DA+E G+ NVFT+N L++ L KE KM+EACNLWD++++KG+ PNVV+
Sbjct: 227  KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 286

Query: 893  YNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQLV 714
            YNN+ILG+CR+ N+++A K+   +L+ G  P+ +T++IL+DG+F+KG+ E AF  F ++ 
Sbjct: 287  YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346

Query: 713  SLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAIN 534
               + PT+ T   I+ GLC+ G++ E RD   K +  GF+P CM YN+II+GF+KE  IN
Sbjct: 347  DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 406

Query: 533  SALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLI 354
             A  VY EMCE G++P+ VTYT+LIDG  K NN DLA+++ NDM  KGL++D+ AYG LI
Sbjct: 407  LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 466

Query: 353  DGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVP 174
            DG+CKRRDM+SA EL NEL   GLSPN  + NS+I+GFK++++++ A+  +KKM  +G+P
Sbjct: 467  DGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIP 526

Query: 173  SDLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
             DL TYT+LIDGLL+ G+LL A++++TEML+ GI PD     VL+NGLCNKGQ ENA
Sbjct: 527  CDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583



 Score =  210 bits (534), Expect = 7e-52
 Identities = 132/476 (27%), Positives = 229/476 (48%), Gaps = 70/476 (14%)
 Frame = -2

Query: 1220 PNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFLKAKLWKEALMQ 1041
            P+    ++L+    R     +A+EL+ +M L G+    F ++ ++R  LK     EA   
Sbjct: 3    PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 1040 FDDAVEYGV------FNVF------------------------------TYNLLITTLSK 969
            F  A   GV      +++F                              T+  +IT   K
Sbjct: 63   FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 968  ESKMSEACNLWDDMLSKGLVPNVVTYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVIT 789
            E  ++EA  L DDM++ G   N+    +L+ GYC QGN+ SA  L+  + E GL P+ +T
Sbjct: 123  EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 788  YSILIDGHFRKGETEQAFKYFDQLVSLGLAPT---------------------------- 693
            YS+LIDG  + G  E+AF+++ ++ + G+  +                            
Sbjct: 183  YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 692  ------NFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAINS 531
                   FT+N +++ LC+ GK +EA +   +++  G  P+ ++YN+II G  +++ IN+
Sbjct: 243  ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 530  ALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVLID 351
            A  VY EM ++G +PN VT+T L+DG  K  + + A  + + M +  +       G++I 
Sbjct: 303  ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 362

Query: 350  GYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGVPS 171
            G CK       R+LFN+ +  G  P  +  N+II GF    +++ A   +++M E G+  
Sbjct: 363  GLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 422

Query: 170  DLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQVENA 3
               TYT+LIDG  +G  +  A  L  +M   G++ D+   G L++G C +  +++A
Sbjct: 423  STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSA 478



 Score =  196 bits (498), Expect = 1e-47
 Identities = 111/377 (29%), Positives = 195/377 (51%), Gaps = 1/377 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            L++E+  +G +PN V+Y+ +I G CR  N+  A ++Y+ M   G  P       L+ G+ 
Sbjct: 271  LWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 330

Query: 1073 KAKLWKEALMQFDDAVEYGVFNV-FTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K    + A   F    +  +     T  ++I  L K  +  E  +L++  +S+G VP  +
Sbjct: 331  KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 390

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
             YN +I G+ ++GN++ AS +   + E G+ P  +TY+ LIDG  +    + A K  + +
Sbjct: 391  PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 450

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
               GL      Y  +++G C+      A + L +L   G  P+   YNS+I GF   N +
Sbjct: 451  KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 510

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDVIAYGVL 357
              A+ +Y +M   G+  ++ TYT+LIDGLLKS     A  +  +M +KG+  D  A+ VL
Sbjct: 511  EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570

Query: 356  IDGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKKMAEDGV 177
            I+G C +   E+AR++  ++    + P+ ++ N++I+G     ++  A   H +M + G+
Sbjct: 571  INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630

Query: 176  PSDLATYTTLIDGLLQG 126
              D  TY  L++G  +G
Sbjct: 631  VPDNITYDILVNGKFKG 647



 Score =  146 bits (369), Expect = 9e-33
 Identities = 84/273 (30%), Positives = 136/273 (49%), Gaps = 1/273 (0%)
 Frame = -2

Query: 1253 LFEEIDREGPAPNKVTYSVLIEGCCRHGNMQKAKELYRRMKLKGIEPTVFHVNSLIRGFL 1074
            LF +   +G  P  + Y+ +I+G  + GN+  A  +YR M   GI P+     SLI GF 
Sbjct: 376  LFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFC 435

Query: 1073 KAKLWKEALMQFDDAVEYGV-FNVFTYNLLITTLSKESKMSEACNLWDDMLSKGLVPNVV 897
            K      AL   +D    G+  ++  Y  LI    K   M  A  L +++   GL PN  
Sbjct: 436  KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 495

Query: 896  TYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAFKYFDQL 717
             YN++I G+    N++ A  L   ++ +G+  D+ TY+ LIDG  + G    A     ++
Sbjct: 496  IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 555

Query: 716  VSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGFVKENAI 537
            +S G+ P +  +  ++NGLC  G+   AR  L+ +     IP  + YN++I G  KE  +
Sbjct: 556  LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNL 615

Query: 536  NSALAVYTEMCESGLSPNVVTYTTLIDGLLKSN 438
              A  ++ EM + GL P+ +TY  L++G  K +
Sbjct: 616  QEAFRLHDEMLDRGLVPDNITYDILVNGKFKGD 648



 Score =  136 bits (343), Expect = 1e-29
 Identities = 84/304 (27%), Positives = 149/304 (49%)
 Frame = -2

Query: 914 LVPNVVTYNNLILGYCRQGNMDSASKLLANLLEKGLKPDVITYSILIDGHFRKGETEQAF 735
           + P++   N L+    R+     A +L   +L  G+  D  T  +++    ++G   +A 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 734 KYFDQLVSLGLAPTNFTYNKIVNGLCRVGKTSEARDRLKKLLENGFIPDCMTYNSIINGF 555
           ++F Q  + G+      Y+  V+ LC    +  A   L+++   G+IP   T+ S+I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 554 VKENAINSALAVYTEMCESGLSPNVVTYTTLIDGLLKSNNYDLAIQMKNDMTNKGLRLDV 375
           VKE  +  AL +  +M   G S N+   T+L+ G     N   A+ + N+++  GL  + 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 374 IAYGVLIDGYCKRRDMESARELFNELIEDGLSPNTVVCNSIISGFKSLSDMDTALVFHKK 195
           + Y VLIDG CK  ++E A E ++E+   G+  +    NSI+ G+        A      
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 194 MAEDGVPSDLATYTTLIDGLLQGGKLLEATNLYTEMLANGIEPDVIVSGVLVNGLCNKGQ 15
             E G+ +++ T+ TL+  L + GK+ EA NL+ E++A GI P+V+    ++ G C K  
Sbjct: 241 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299

Query: 14  VENA 3
           +  A
Sbjct: 300 INAA 303