BLASTX nr result

ID: Bupleurum21_contig00017417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017417
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   157   1e-36
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   156   2e-36
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   155   3e-36
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   155   3e-36
ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [S...   151   6e-35

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  157 bits (397), Expect = 1e-36
 Identities = 83/172 (48%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
 Frame = +3

Query: 6   KLRLVANRETDGRESNIPINAYEFAALIADD--NLNDSRDIVVDYKGGGLHRISVLHPCF 179
           ++RL+  R  D R+   P  A E A LI  D    N  RDIV+++K  GL RI   HP F
Sbjct: 192 RIRLIGTRSNDSRQYTAP-TATEIAGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKF 250

Query: 180 MSLQYPLLFPYGEDGYRLEILHVG--VCYKSGKRRYTVTMREYYCFRLQYRIREGHTLLG 353
           M++QYPLLFPY EDG+ L+I +       K  K+R  VTMREYY +R+Q R  E +TL+ 
Sbjct: 251 MAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVTMREYYAYRIQQRPCEANTLII 310

Query: 354 GGRIFLQFVVDAWACIEHTRLMWVKKNQKILRSELYNNIVDSVHKGDNDASA 509
           GGR+F Q+VVDA+  IE  RL WV++NQ +LR++LY N+ D+V +GD  A+A
Sbjct: 311 GGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCDAVVRGDTIAAA 362


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  156 bits (394), Expect = 2e-36
 Identities = 82/172 (47%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
 Frame = +3

Query: 6   KLRLVANRETDGRESNIPINAYEFAALIADD--NLNDSRDIVVDYKGGGLHRISVLHPCF 179
           ++RL+  R  D R+   P  A E A LI  D    N  RDIV+++K  GL RI   HP F
Sbjct: 192 RIRLIGTRSNDSRQYTTP-TATEIAGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKF 250

Query: 180 MSLQYPLLFPYGEDGYRLEILHVG--VCYKSGKRRYTVTMREYYCFRLQYRIREGHTLLG 353
           M++QYPLLFPY EDG+ L+I +       K  K+R  VT+REYY +R+Q R  E +TL+ 
Sbjct: 251 MAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVTLREYYAYRIQQRPCEANTLII 310

Query: 354 GGRIFLQFVVDAWACIEHTRLMWVKKNQKILRSELYNNIVDSVHKGDNDASA 509
           GGR+F Q+VVDA+  IE  RL WV++NQ +LR++LY N+ D+V +GD  A+A
Sbjct: 311 GGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCDAVVRGDTIAAA 362


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  155 bits (393), Expect = 3e-36
 Identities = 82/172 (47%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
 Frame = +3

Query: 6   KLRLVANRETDGRESNIPINAYEFAALIADD--NLNDSRDIVVDYKGGGLHRISVLHPCF 179
           ++RL+  R  D R+   P  A E   LI  D    N  RDIV+++K  GL RI   HP F
Sbjct: 192 RIRLIGTRSNDSRQYTTP-TATEIVGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKF 250

Query: 180 MSLQYPLLFPYGEDGYRLEILHVG--VCYKSGKRRYTVTMREYYCFRLQYRIREGHTLLG 353
           M++QYPLLFPY EDG+ L+I +       K  K+R  VTMREYY +R+Q R  E +TL+ 
Sbjct: 251 MAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVTMREYYAYRIQQRPCEANTLII 310

Query: 354 GGRIFLQFVVDAWACIEHTRLMWVKKNQKILRSELYNNIVDSVHKGDNDASA 509
           GGR+F Q+VVDA+  IE  RL WV++NQ +LR++LY N+ D+V +GD  A+A
Sbjct: 311 GGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCDAVVRGDTIAAA 362


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score =  155 bits (393), Expect = 3e-36
 Identities = 82/172 (47%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
 Frame = +3

Query: 6   KLRLVANRETDGRESNIPINAYEFAALIADD--NLNDSRDIVVDYKGGGLHRISVLHPCF 179
           ++RL+  R  D R+   P  A E   LI  D    N  RDIV+++K  GL RI   HP F
Sbjct: 165 RIRLIGTRSNDSRQYTTP-TATEIVGLIVGDFGESNGRRDIVIEHKTDGLQRIKEYHPKF 223

Query: 180 MSLQYPLLFPYGEDGYRLEILHVG--VCYKSGKRRYTVTMREYYCFRLQYRIREGHTLLG 353
           M++QYPLLFPY EDG+ L+I +       K  K+R  VTMREYY +R+Q R  E +TL+ 
Sbjct: 224 MAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVTMREYYAYRIQQRPCEANTLII 283

Query: 354 GGRIFLQFVVDAWACIEHTRLMWVKKNQKILRSELYNNIVDSVHKGDNDASA 509
           GGR+F Q+VVDA+  IE  RL WV++NQ +LR++LY N+ D+V +GD  A+A
Sbjct: 284 GGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNVCDAVVRGDTIAAA 335


>ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [Sorghum bicolor]
           gi|241918381|gb|EER91525.1| hypothetical protein
           SORBIDRAFT_01g020130 [Sorghum bicolor]
          Length = 1318

 Score =  151 bits (382), Expect = 6e-35
 Identities = 83/170 (48%), Positives = 113/170 (66%), Gaps = 2/170 (1%)
 Frame = +3

Query: 9   LRLVANRETDGRESNIPINAYEFAALIADDNLNDS--RDIVVDYKGGGLHRISVLHPCFM 182
           LRL+ NRE DGRE N+P +A + AALI  D    S  RDIV++YK     RI  LHP FM
Sbjct: 175 LRLIDNREQDGRECNMP-SASDIAALIVKDPAEGSHRRDIVLEYKDMRPKRIPELHPKFM 233

Query: 183 SLQYPLLFPYGEDGYRLEILHVGVCYKSGKRRYTVTMREYYCFRLQYRIREGHTLLGGGR 362
           ++QYPLLFPYGEDG+R  I +     ++GK+   +TMREYY +RLQ R  +   +L  G 
Sbjct: 234 AMQYPLLFPYGEDGFRPGIRYRANGARNGKKY--ITMREYYAYRLQQRSDQSMLMLMCGN 291

Query: 363 IFLQFVVDAWACIEHTRLMWVKKNQKILRSELYNNIVDSVHKGDNDASAV 512
           + +QF+VD +ACIE +RL W++KNQ  LR+EL++ + D++ KGD     V
Sbjct: 292 LSMQFLVDVYACIEQSRLDWIRKNQGALRTELFSGLRDAIVKGDTRTEQV 341


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