BLASTX nr result

ID: Bupleurum21_contig00017416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017416
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]              465   e-167
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...   465   e-167
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]   465   e-167
ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-li...   465   e-167
ref|XP_002512504.1| peptide chain release factor, putative [Rici...   458   e-163

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  465 bits (1197), Expect(2) = e-167
 Identities = 232/277 (83%), Positives = 251/277 (90%)
 Frame = -3

Query: 1085 ESMSALLSMRKVIXXXXXXXXXAGEHDSCCCFIEVQAGAGGTESMDWASMVMQMYKMWAQ 906
            ES+ ALL MR+           AG+HDSC C+IEVQAGAGGTESMDWA+MVMQMYKMWAQ
Sbjct: 194  ESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQ 253

Query: 905  HRGYRVTVVDEMPGELAGIKRATIKVDGDYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 726
             RGY VTVVDEMPGE AGIKRATIKVDG+Y+FGYAKAEVGVHRLVRISPFDSGKRRHTSF
Sbjct: 254  RRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSF 313

Query: 725  AAVAVIPILGDGAATHVQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQ 546
            AAVAVIPILGD A++HVQINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQ
Sbjct: 314  AAVAVIPILGD-ASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQ 372

Query: 545  NERSQHQNKASAMSVLQSRLDQLEMARQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVK 366
            NERSQHQNKASAM+VLQSRLDQLE++RQAQ NAQHTQSL DISWGNQIR+YVLHPYRMVK
Sbjct: 373  NERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVK 432

Query: 365  DLRTNYEVSDPDSVLEGDLDAFIFSYLSALVDKDEDD 255
            DLRTNYEVSDPDSVLEGDLD FI SYLSA +DKDE +
Sbjct: 433  DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGE 469



 Score =  152 bits (384), Expect(2) = e-167
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = -2

Query: 1461 ECESDWKSHASSIAQSIHLIKKRLKWKKLEVRLAMLSAQLNKPDLWDDPIRAGRVNREHG 1282
            E ESDWKSHA++IA SIHLIKKRL+WKKL VRL +LSAQLNKPDLWD+P+ AG+++REHG
Sbjct: 98   ESESDWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHG 157

Query: 1281 SLVNKVKAIKAYEQELFEHIDMIKLAREDNDPDLES 1174
             L+ K+K +K  EQEL EHIDM+KLARE+NDP+LES
Sbjct: 158  MLMGKMKGVKNLEQELLEHIDMVKLAREENDPELES 193


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score =  465 bits (1197), Expect(2) = e-167
 Identities = 232/277 (83%), Positives = 251/277 (90%)
 Frame = -3

Query: 1085 ESMSALLSMRKVIXXXXXXXXXAGEHDSCCCFIEVQAGAGGTESMDWASMVMQMYKMWAQ 906
            ES+ ALL MR+           AG+HDSC C+IEVQAGAGGTESMDWA+MVMQMYKMWAQ
Sbjct: 156  ESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQ 215

Query: 905  HRGYRVTVVDEMPGELAGIKRATIKVDGDYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 726
             RGY VTVVDEMPGE AGIKRATIKVDG+Y+FGYAKAEVGVHRLVRISPFDSGKRRHTSF
Sbjct: 216  RRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSF 275

Query: 725  AAVAVIPILGDGAATHVQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQ 546
            AAVAVIPILGD A++HVQINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQ
Sbjct: 276  AAVAVIPILGD-ASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQ 334

Query: 545  NERSQHQNKASAMSVLQSRLDQLEMARQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVK 366
            NERSQHQNKASAM+VLQSRLDQLE++RQAQ NAQHTQSL DISWGNQIR+YVLHPYRMVK
Sbjct: 335  NERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVK 394

Query: 365  DLRTNYEVSDPDSVLEGDLDAFIFSYLSALVDKDEDD 255
            DLRTNYEVSDPDSVLEGDLD FI SYLSA +DKDE +
Sbjct: 395  DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGE 431



 Score =  152 bits (384), Expect(2) = e-167
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = -2

Query: 1461 ECESDWKSHASSIAQSIHLIKKRLKWKKLEVRLAMLSAQLNKPDLWDDPIRAGRVNREHG 1282
            E ESDWKSHA++IA SIHLIKKRL+WKKL VRL +LSAQLNKPDLWD+P+ AG+++REHG
Sbjct: 60   ESESDWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHG 119

Query: 1281 SLVNKVKAIKAYEQELFEHIDMIKLAREDNDPDLES 1174
             L+ K+K +K  EQEL EHIDM+KLARE+NDP+LES
Sbjct: 120  MLMGKMKGVKNLEQELLEHIDMVKLAREENDPELES 155


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  465 bits (1197), Expect(2) = e-167
 Identities = 232/277 (83%), Positives = 251/277 (90%)
 Frame = -3

Query: 1085 ESMSALLSMRKVIXXXXXXXXXAGEHDSCCCFIEVQAGAGGTESMDWASMVMQMYKMWAQ 906
            ES+ ALL MR+           AG+HDSC C+IEVQAGAGGTESMDWA+MVMQMYKMWAQ
Sbjct: 148  ESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQ 207

Query: 905  HRGYRVTVVDEMPGELAGIKRATIKVDGDYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 726
             RGY VTVVDEMPGE AGIKRATIKVDG+Y+FGYAKAEVGVHRLVRISPFDSGKRRHTSF
Sbjct: 208  RRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSF 267

Query: 725  AAVAVIPILGDGAATHVQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQ 546
            AAVAVIPILGD A++HVQINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQ
Sbjct: 268  AAVAVIPILGD-ASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQ 326

Query: 545  NERSQHQNKASAMSVLQSRLDQLEMARQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVK 366
            NERSQHQNKASAM+VLQSRLDQLE++RQAQ NAQHTQSL DISWGNQIR+YVLHPYRMVK
Sbjct: 327  NERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVK 386

Query: 365  DLRTNYEVSDPDSVLEGDLDAFIFSYLSALVDKDEDD 255
            DLRTNYEVSDPDSVLEGDLD FI SYLSA +DKDE +
Sbjct: 387  DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGE 423



 Score =  152 bits (384), Expect(2) = e-167
 Identities = 70/96 (72%), Positives = 85/96 (88%)
 Frame = -2

Query: 1461 ECESDWKSHASSIAQSIHLIKKRLKWKKLEVRLAMLSAQLNKPDLWDDPIRAGRVNREHG 1282
            E ESDWKSHA++IA SIHLIKKRL+WKKL VRL +LSAQLNKPDLWD+P+ AG+++REHG
Sbjct: 52   ESESDWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHG 111

Query: 1281 SLVNKVKAIKAYEQELFEHIDMIKLAREDNDPDLES 1174
             L+ K+K +K  EQEL EHIDM+KLARE+NDP+LES
Sbjct: 112  MLMGKMKGVKNLEQELLEHIDMVKLAREENDPELES 147


>ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 466

 Score =  465 bits (1197), Expect(2) = e-167
 Identities = 230/276 (83%), Positives = 252/276 (91%)
 Frame = -3

Query: 1085 ESMSALLSMRKVIXXXXXXXXXAGEHDSCCCFIEVQAGAGGTESMDWASMVMQMYKMWAQ 906
            ES+ ALL+MR+           +GE DSC C+IEVQAGAGGTESMDWA+MVMQMYK WAQ
Sbjct: 191  ESLKALLNMRRNAKEKELEALLSGEQDSCSCYIEVQAGAGGTESMDWAAMVMQMYKSWAQ 250

Query: 905  HRGYRVTVVDEMPGELAGIKRATIKVDGDYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 726
             RGY+VTVVDEMPGE+AGIKRATIKVDG++AFGYAKAE+GVHRLVRISPFDS KRRHTSF
Sbjct: 251  QRGYKVTVVDEMPGEIAGIKRATIKVDGEFAFGYAKAEIGVHRLVRISPFDSNKRRHTSF 310

Query: 725  AAVAVIPILGDGAATHVQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQ 546
            AAVAVIPILGDG+ THVQINESDLR+ER RAGGAGGQHVNTTESAVRI HIPTG++A+CQ
Sbjct: 311  AAVAVIPILGDGS-THVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQ 369

Query: 545  NERSQHQNKASAMSVLQSRLDQLEMARQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVK 366
            NERSQHQNKASAM+VLQSRLDQLEMARQAQ NAQHTQSL DI+WG+QIRSYVLHPYRMVK
Sbjct: 370  NERSQHQNKASAMAVLQSRLDQLEMARQAQFNAQHTQSLTDITWGSQIRSYVLHPYRMVK 429

Query: 365  DLRTNYEVSDPDSVLEGDLDAFIFSYLSALVDKDED 258
            DLRTNYEVSDPDSVLEGDLD+FI SYLSA +DKD+D
Sbjct: 430  DLRTNYEVSDPDSVLEGDLDSFILSYLSASLDKDDD 465



 Score =  149 bits (377), Expect(2) = e-167
 Identities = 69/96 (71%), Positives = 85/96 (88%)
 Frame = -2

Query: 1461 ECESDWKSHASSIAQSIHLIKKRLKWKKLEVRLAMLSAQLNKPDLWDDPIRAGRVNREHG 1282
            E + DWKSHA++IAQSIHLIK+RL W+KL+VRL MLS QL+K DLWDDP+RAG+++REHG
Sbjct: 95   ENDGDWKSHATAIAQSIHLIKRRLHWEKLKVRLDMLSFQLSKEDLWDDPVRAGKISREHG 154

Query: 1281 SLVNKVKAIKAYEQELFEHIDMIKLAREDNDPDLES 1174
            SL+ K+K + A+EQEL EHIDMIKLARE+ND DLES
Sbjct: 155  SLLGKMKEVNAFEQELLEHIDMIKLAREENDADLES 190


>ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
            gi|223548465|gb|EEF49956.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 550

 Score =  458 bits (1178), Expect(2) = e-163
 Identities = 227/276 (82%), Positives = 246/276 (89%)
 Frame = -3

Query: 1085 ESMSALLSMRKVIXXXXXXXXXAGEHDSCCCFIEVQAGAGGTESMDWASMVMQMYKMWAQ 906
            ES+ AL  MR+           AGE DSC C+IEVQ+GAGGTESMDWA MVMQMYK+WAQ
Sbjct: 226  ESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQSGAGGTESMDWAKMVMQMYKLWAQ 285

Query: 905  HRGYRVTVVDEMPGELAGIKRATIKVDGDYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 726
             RGY VTVVDEMPGE+AGIKRATIKVDG+YAFGYAKAEVGVHRLVRISPFDSGKRRHTSF
Sbjct: 286  RRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 345

Query: 725  AAVAVIPILGDGAATHVQINESDLRVERMRAGGAGGQHVNTTESAVRITHIPTGISASCQ 546
            AAVAVIPILGDG+ THVQINESDLR+ER R+GG GGQH NTTESAVRI HIPTG++A+CQ
Sbjct: 346  AAVAVIPILGDGS-THVQINESDLRIERYRSGGPGGQHANTTESAVRIVHIPTGVTATCQ 404

Query: 545  NERSQHQNKASAMSVLQSRLDQLEMARQAQANAQHTQSLNDISWGNQIRSYVLHPYRMVK 366
            NERSQH NKASAM+VLQSRLDQLEMARQAQ NAQHTQSL +ISWGNQIR+YVLHPYRMVK
Sbjct: 405  NERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMVK 464

Query: 365  DLRTNYEVSDPDSVLEGDLDAFIFSYLSALVDKDED 258
            DLRTNYEVSDPDSVLEG++D FI SYLSA +DKDED
Sbjct: 465  DLRTNYEVSDPDSVLEGEIDGFILSYLSASLDKDED 500



 Score =  145 bits (366), Expect(2) = e-163
 Identities = 69/103 (66%), Positives = 86/103 (83%)
 Frame = -2

Query: 1461 ECESDWKSHASSIAQSIHLIKKRLKWKKLEVRLAMLSAQLNKPDLWDDPIRAGRVNREHG 1282
            E ESDWKSHA++IAQSI +IKKRL+WKKL VRL +LS QLNKPDLWDDP+ AG+++REHG
Sbjct: 130  ENESDWKSHAAAIAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHG 189

Query: 1281 SLVNKVKAIKAYEQELFEHIDMIKLAREDNDPDLESVGSQLFF 1153
            SL+ K K + A+E+EL EHIDMIKLARE++D +LES   +  F
Sbjct: 190  SLMAKRKEVTAFERELLEHIDMIKLAREEDDAELESESLKALF 232


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