BLASTX nr result

ID: Bupleurum21_contig00017412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017412
         (2129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275719.1| PREDICTED: uncharacterized WD repeat-contain...   681   0.0  
emb|CBI17455.3| unnamed protein product [Vitis vinifera]              672   0.0  
ref|XP_002521518.1| WD-repeat protein, putative [Ricinus communi...   668   0.0  
ref|XP_002334041.1| predicted protein [Populus trichocarpa] gi|2...   639   0.0  
ref|XP_004165621.1| PREDICTED: uncharacterized WD repeat-contain...   636   e-180

>ref|XP_002275719.1| PREDICTED: uncharacterized WD repeat-containing protein
            C17D11.16-like [Vitis vinifera]
          Length = 493

 Score =  681 bits (1756), Expect = 0.0
 Identities = 335/492 (68%), Positives = 388/492 (78%)
 Frame = -3

Query: 1863 MIAAVSWIPKGVCKSVPEAAEPPSKEEIEELIKSGVLXXXXXXXXXXXXXXXDVEAVEKH 1684
            MIAA+SWIPKGV KSVP   EPPSKEEIEE++K+G L               D +A ++ 
Sbjct: 1    MIAAISWIPKGVSKSVPSVVEPPSKEEIEEMLKNGALERCGDSESEEDDEIMDADAAKQD 60

Query: 1683 DEVXXXXXXXXAMVKPSKSITGTGFDDIADGLRELXXXXXXXXXDGIELFSKGLGDTYYK 1504
            D V        A+ K  K+ +GT F DI DGL+EL         DGIE+FSKGLGDTYY 
Sbjct: 61   DTVAHALAAADALGKTPKN-SGTSFLDITDGLKELDMDHYDDEDDGIEVFSKGLGDTYYP 119

Query: 1503 GNDEDPYLVDKDGNDSEELEDMIIKAEDSVIVCASNEDDVSHLEIWILEDNGDDDDQNMF 1324
             ND DPYL D + +DSEE+EDM IKAEDSVIVCA N DD+SHLE+WI E++ +D D NM+
Sbjct: 120  SNDMDPYLKDNNDDDSEEVEDMTIKAEDSVIVCARNADDLSHLEVWIFEES-EDGDSNMY 178

Query: 1323 IHHDIILPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPAIEIWDLDILDEVQPSQILGGIA 1144
            +HHD+I+PAFPLCTAWLDCP+KGGEKGNFIAVGSME +IEIWDLDI+DEVQP  +LGG+A
Sbjct: 179  VHHDVIIPAFPLCTAWLDCPLKGGEKGNFIAVGSMETSIEIWDLDIIDEVQPFLVLGGVA 238

Query: 1143 EXXXXXXXXXXXXXXXXXXKGSHTDAVLGLAWNKEYRNILASASADNSVKIWDVATGECN 964
            E                   GSHTD+VLGLAWNKEYRNILASASAD  VKIWDV +GECN
Sbjct: 239  EKKKKKAKKTSVKYRK----GSHTDSVLGLAWNKEYRNILASASADKLVKIWDVTSGECN 294

Query: 963  ITMEHHTDKVQAVAWNHYAPQVLLSGSFDHSVVMKDGRIPEHSGFKWSVNADVESLAWDP 784
            ITM+HHTDKVQ VAWNH+ PQVLLSGSFD SVVMKDGRIP H+GFKWSV ADVESLAWDP
Sbjct: 295  ITMDHHTDKVQVVAWNHHEPQVLLSGSFDRSVVMKDGRIPTHAGFKWSVTADVESLAWDP 354

Query: 783  HTEHSFVVSLEDGTVTGFDIRAAKTDASSGTKPTFTLHAHDKAVSSISYNPRIPNLLATG 604
            HT HSFVVSLEDGTV GFD+R AK+D++S +KP FTLHAHD+AV +ISYNP  PN LATG
Sbjct: 355  HTNHSFVVSLEDGTVQGFDVRTAKSDSASESKPAFTLHAHDQAVCTISYNPLAPNFLATG 414

Query: 603  STDKMVKLWDLSNNQPSCVASKNPKAGAVFSISFAEDSPFMLAIGGSKGKLEVWDTITDA 424
            STDKMVKLWDLSNNQPSCVA++NPKAGAVFSISF+ED PF+LAIGGS GKLEVWDT+++A
Sbjct: 415  STDKMVKLWDLSNNQPSCVATRNPKAGAVFSISFSEDRPFLLAIGGSTGKLEVWDTLSEA 474

Query: 423  GISRRYGKYNNQ 388
             +SR++G Y++Q
Sbjct: 475  PVSRKFGNYSSQ 486


>emb|CBI17455.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  672 bits (1734), Expect = 0.0
 Identities = 333/492 (67%), Positives = 386/492 (78%)
 Frame = -3

Query: 1863 MIAAVSWIPKGVCKSVPEAAEPPSKEEIEELIKSGVLXXXXXXXXXXXXXXXDVEAVEKH 1684
            MIAA+SWIPKGV KSVP   EPPSKEEIEE++K+G L               D +A ++ 
Sbjct: 1    MIAAISWIPKGVSKSVPSVVEPPSKEEIEEMLKNGALERCGDSESEEDDEIMDADAAKQD 60

Query: 1683 DEVXXXXXXXXAMVKPSKSITGTGFDDIADGLRELXXXXXXXXXDGIELFSKGLGDTYYK 1504
            D V        A+ K  K+ +GT F DI DGL+EL         DGIE+FSKGLGDTYY 
Sbjct: 61   DTVAHALAAADALGKTPKN-SGTSFLDITDGLKELDMDHYDDEDDGIEVFSKGLGDTYYP 119

Query: 1503 GNDEDPYLVDKDGNDSEELEDMIIKAEDSVIVCASNEDDVSHLEIWILEDNGDDDDQNMF 1324
             ND DPYL D + +DSEE+EDM IKAEDSVIVCA N DD+SHLE+WI E++ +D D NM+
Sbjct: 120  SNDMDPYLKDNNDDDSEEVEDMTIKAEDSVIVCARNADDLSHLEVWIFEES-EDGDSNMY 178

Query: 1323 IHHDIILPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPAIEIWDLDILDEVQPSQILGGIA 1144
            +HHD+I+PAFPLCTAWLDCP+KGGEKGNFIAVGSME +IEIWDLDI+DEVQP  +LGG+A
Sbjct: 179  VHHDVIIPAFPLCTAWLDCPLKGGEKGNFIAVGSMETSIEIWDLDIIDEVQPFLVLGGVA 238

Query: 1143 EXXXXXXXXXXXXXXXXXXKGSHTDAVLGLAWNKEYRNILASASADNSVKIWDVATGECN 964
            E                   GSHTD+VLGLAWNKEYRNILASASAD  VKIWDV +GECN
Sbjct: 239  EKKKKKAKKTSVKYRK----GSHTDSVLGLAWNKEYRNILASASADKLVKIWDVTSGECN 294

Query: 963  ITMEHHTDKVQAVAWNHYAPQVLLSGSFDHSVVMKDGRIPEHSGFKWSVNADVESLAWDP 784
            ITM+HHTDK   VAWNH+ PQVLLSGSFD SVVMKDGRIP H+GFKWSV ADVESLAWDP
Sbjct: 295  ITMDHHTDKA-IVAWNHHEPQVLLSGSFDRSVVMKDGRIPTHAGFKWSVTADVESLAWDP 353

Query: 783  HTEHSFVVSLEDGTVTGFDIRAAKTDASSGTKPTFTLHAHDKAVSSISYNPRIPNLLATG 604
            HT HSFVVSLEDGTV GFD+R AK+D++S +KP FTLHAHD+AV +ISYNP  PN LATG
Sbjct: 354  HTNHSFVVSLEDGTVQGFDVRTAKSDSASESKPAFTLHAHDQAVCTISYNPLAPNFLATG 413

Query: 603  STDKMVKLWDLSNNQPSCVASKNPKAGAVFSISFAEDSPFMLAIGGSKGKLEVWDTITDA 424
            STDKMVKLWDLSNNQPSCVA++NPKAGAVFSISF+ED PF+LAIGGS GKLEVWDT+++A
Sbjct: 414  STDKMVKLWDLSNNQPSCVATRNPKAGAVFSISFSEDRPFLLAIGGSTGKLEVWDTLSEA 473

Query: 423  GISRRYGKYNNQ 388
             +SR++G Y++Q
Sbjct: 474  PVSRKFGNYSSQ 485


>ref|XP_002521518.1| WD-repeat protein, putative [Ricinus communis]
            gi|223539196|gb|EEF40789.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 493

 Score =  668 bits (1724), Expect = 0.0
 Identities = 332/495 (67%), Positives = 386/495 (77%)
 Frame = -3

Query: 1863 MIAAVSWIPKGVCKSVPEAAEPPSKEEIEELIKSGVLXXXXXXXXXXXXXXXDVEAVEKH 1684
            MIAAVSW+PKGV KSVP  AEPPSKEEIEE+I SG L               +++  +++
Sbjct: 1    MIAAVSWVPKGVSKSVPAVAEPPSKEEIEEMINSGALDRGEDSGSEKDDENMEIDNSKQN 60

Query: 1683 DEVXXXXXXXXAMVKPSKSITGTGFDDIADGLRELXXXXXXXXXDGIELFSKGLGDTYYK 1504
            +EV        A+ +  KS     FDDI +GL+EL         +GIELFS GLGD YY 
Sbjct: 61   NEVDQALAVADALGRAPKSTIK--FDDITEGLKELDMDNYDEEDEGIELFSTGLGDLYYP 118

Query: 1503 GNDEDPYLVDKDGNDSEELEDMIIKAEDSVIVCASNEDDVSHLEIWILEDNGDDDDQNMF 1324
             N+ DPYL D D  DSE+LEDM I  +D+VIVCA NED+ SHLE+WI+E++ DD D NM+
Sbjct: 119  SNEADPYLNDNDDEDSEDLEDMTINPKDAVIVCARNEDEFSHLEVWIIEES-DDGDSNMY 177

Query: 1323 IHHDIILPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPAIEIWDLDILDEVQPSQILGGIA 1144
            +HHDIIL AFPLCTAWLDCP+KG EKGNFIAVGSMEP+IEIWDLDI+DEVQPS +LGG+A
Sbjct: 178  VHHDIILSAFPLCTAWLDCPLKGAEKGNFIAVGSMEPSIEIWDLDIVDEVQPSVVLGGVA 237

Query: 1143 EXXXXXXXXXXXXXXXXXXKGSHTDAVLGLAWNKEYRNILASASADNSVKIWDVATGECN 964
            E                   GSHTD+VLGLAWNK++RNILASASAD  VKIWDVATG+C+
Sbjct: 238  EKKKKKKGKKTSIKYKE---GSHTDSVLGLAWNKQFRNILASASADKQVKIWDVATGKCD 294

Query: 963  ITMEHHTDKVQAVAWNHYAPQVLLSGSFDHSVVMKDGRIPEHSGFKWSVNADVESLAWDP 784
            ITMEHHTDKVQAVAWN++ PQVLLSGSFDHSVV+KDGRIP H GFKW V ADVESLAWDP
Sbjct: 295  ITMEHHTDKVQAVAWNYHEPQVLLSGSFDHSVVLKDGRIPTHPGFKWYVTADVESLAWDP 354

Query: 783  HTEHSFVVSLEDGTVTGFDIRAAKTDASSGTKPTFTLHAHDKAVSSISYNPRIPNLLATG 604
            H  HSFVVSLEDGTV GFDIR AKTD++S +KP+FTLHAHDKAV ++SYNP +PNLLATG
Sbjct: 355  HNTHSFVVSLEDGTVQGFDIRTAKTDSTSDSKPSFTLHAHDKAVCTVSYNPSVPNLLATG 414

Query: 603  STDKMVKLWDLSNNQPSCVASKNPKAGAVFSISFAEDSPFMLAIGGSKGKLEVWDTITDA 424
            STDKMVKLWDLSNNQPSCVASK+PKAG +FSISF+EDSPF LAIGGSKGKL+VWD  +DA
Sbjct: 415  STDKMVKLWDLSNNQPSCVASKDPKAGGIFSISFSEDSPFSLAIGGSKGKLQVWDISSDA 474

Query: 423  GISRRYGKYNNQKKN 379
            G+SRR+   N+ K+N
Sbjct: 475  GVSRRF--MNSSKQN 487


>ref|XP_002334041.1| predicted protein [Populus trichocarpa] gi|222839644|gb|EEE77967.1|
            predicted protein [Populus trichocarpa]
          Length = 489

 Score =  639 bits (1649), Expect = 0.0
 Identities = 322/489 (65%), Positives = 377/489 (77%), Gaps = 2/489 (0%)
 Frame = -3

Query: 1863 MIAAVSWIPKGVCKSVPEAAEPPSKEEIEELIKSGVLXXXXXXXXXXXXXXXD-VEAVEK 1687
            MIAAVSW+PKGV KSVP  A+PPSKEEIEELIK+  L                 V A ++
Sbjct: 1    MIAAVSWVPKGVAKSVPGVADPPSKEEIEELIKASDLERSGEDSGSEEDDQEMDVGAAKQ 60

Query: 1686 HDEVXXXXXXXXAMVKPSK-SITGTGFDDIADGLRELXXXXXXXXXDGIELFSKGLGDTY 1510
              EV        A+ + SK + + T FDDIADGL+EL         DGIELFS GLGD Y
Sbjct: 61   TGEVSQALAVANALGRSSKVNKSETKFDDIADGLKELDMDNYDDEEDGIELFSTGLGDLY 120

Query: 1509 YKGNDEDPYLVDKDGNDSEELEDMIIKAEDSVIVCASNEDDVSHLEIWILEDNGDDDDQN 1330
            Y  N  DPY+ D+D +DSE+LEDM IK +D+VIVCA N+D+ S+LE+WIL++  D D  N
Sbjct: 121  YPSNSMDPYIKDEDDDDSEDLEDMAIKPKDAVIVCACNKDEFSNLEVWILDETSDGDS-N 179

Query: 1329 MFIHHDIILPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPAIEIWDLDILDEVQPSQILGG 1150
            +++HH++ L AFPLCTAWLDCP+KGGEKGNFIAVGSMEPAIEIWDLDI+DEVQP+ +LGG
Sbjct: 180  IYVHHEVPLSAFPLCTAWLDCPLKGGEKGNFIAVGSMEPAIEIWDLDIIDEVQPAVVLGG 239

Query: 1149 IAEXXXXXXXXXXXXXXXXXXKGSHTDAVLGLAWNKEYRNILASASADNSVKIWDVATGE 970
            I E                   GSHTD+VLGLAWNK +RNILASASAD  VKIWDV  G+
Sbjct: 240  IEEKKKKKKGKKVSIKYKE---GSHTDSVLGLAWNKHFRNILASASADKQVKIWDVDAGK 296

Query: 969  CNITMEHHTDKVQAVAWNHYAPQVLLSGSFDHSVVMKDGRIPEHSGFKWSVNADVESLAW 790
            C+ITMEHHTDKVQAVAWNH+ PQVLLSGSFD SVVMKDGR+P   GFKWSV ADVESLAW
Sbjct: 297  CDITMEHHTDKVQAVAWNHHEPQVLLSGSFDRSVVMKDGRLPSDPGFKWSVTADVESLAW 356

Query: 789  DPHTEHSFVVSLEDGTVTGFDIRAAKTDASSGTKPTFTLHAHDKAVSSISYNPRIPNLLA 610
            DPH +H FVVSLEDGTV GFDIRAAK+ +SS  KP+FTLHAHDKAV +ISYNP  PNLLA
Sbjct: 357  DPHDKHLFVVSLEDGTVQGFDIRAAKSGSSSDLKPSFTLHAHDKAVCTISYNPLAPNLLA 416

Query: 609  TGSTDKMVKLWDLSNNQPSCVASKNPKAGAVFSISFAEDSPFMLAIGGSKGKLEVWDTIT 430
            TGSTDKMVKLWDLSNNQPSC+ SKNPKAGA+FS+SF+ED+PF+LAIGGSKG LE+WDT++
Sbjct: 417  TGSTDKMVKLWDLSNNQPSCLVSKNPKAGAIFSVSFSEDNPFLLAIGGSKGTLELWDTLS 476

Query: 429  DAGISRRYG 403
            +A ++RR+G
Sbjct: 477  EAEVARRFG 485


>ref|XP_004165621.1| PREDICTED: uncharacterized WD repeat-containing protein
            C17D11.16-like [Cucumis sativus]
          Length = 492

 Score =  636 bits (1641), Expect = e-180
 Identities = 312/494 (63%), Positives = 378/494 (76%), Gaps = 1/494 (0%)
 Frame = -3

Query: 1863 MIAAVSWIPKGVCKSVPEAAEPPSKEEIEELIKSGVLXXXXXXXXXXXXXXXDVEAVEKH 1684
            MI+AVSW+PKGVCK +P+ A+PPS+E I++L+KS  +               D++  + +
Sbjct: 1    MISAVSWVPKGVCKPLPDLADPPSQETIDQLLKSNQVVEDSSKHSDDEADEEDMDVEDAN 60

Query: 1683 DEVXXXXXXXXAMVKPSKSIT-GTGFDDIADGLRELXXXXXXXXXDGIELFSKGLGDTYY 1507
            DE+        A+ K S++    T +DDIA+ L+EL         D IELF+ G GD YY
Sbjct: 61   DEIANALAVAQALGKSSETRNLETKYDDIAEELKELDMDNYDNEDDEIELFTSGAGDVYY 120

Query: 1506 KGNDEDPYLVDKDGNDSEELEDMIIKAEDSVIVCASNEDDVSHLEIWILEDNGDDDDQNM 1327
              ND DPYL DKDG+DSE++ED  IK  D+VI+CA +ED+VS L++WI E  G  D  N 
Sbjct: 121  PSNDMDPYLQDKDGDDSEDIEDETIKPTDAVIICACSEDNVSALQVWICEGYGAGDP-NF 179

Query: 1326 FIHHDIILPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPAIEIWDLDILDEVQPSQILGGI 1147
            +IH DII+PAFPLCTAWLDCP+KGGE+GNFIAVGSMEP+IEIWDLD++DEVQP  +LGGI
Sbjct: 180  YIHRDIIIPAFPLCTAWLDCPLKGGERGNFIAVGSMEPSIEIWDLDVIDEVQPCAVLGGI 239

Query: 1146 AEXXXXXXXXXXXXXXXXXXKGSHTDAVLGLAWNKEYRNILASASADNSVKIWDVATGEC 967
             E                    SHTD+VLGLAWNKE+RNILASASAD  VKIWDV+TG+C
Sbjct: 240  VEKKKKKKKGKKTSVTYKE--NSHTDSVLGLAWNKEFRNILASASADKQVKIWDVSTGQC 297

Query: 966  NITMEHHTDKVQAVAWNHYAPQVLLSGSFDHSVVMKDGRIPEHSGFKWSVNADVESLAWD 787
            NITM+HH DKVQAVAWNH++ QVLLSGSFDHSVV+KDGR P HSG+KW V ADVE+LAWD
Sbjct: 298  NITMQHHIDKVQAVAWNHHSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVENLAWD 357

Query: 786  PHTEHSFVVSLEDGTVTGFDIRAAKTDASSGTKPTFTLHAHDKAVSSISYNPRIPNLLAT 607
            PHTEH FVVSLEDGTV GFDIR A T++SS +K +FTLHAH+KAV S+SY+P  PNLLAT
Sbjct: 358  PHTEHMFVVSLEDGTVKGFDIRNATTESSSESKASFTLHAHEKAVCSVSYSPSAPNLLAT 417

Query: 606  GSTDKMVKLWDLSNNQPSCVASKNPKAGAVFSISFAEDSPFMLAIGGSKGKLEVWDTITD 427
            GSTDKMVKLWDLSNN+PSC+AS NPKAGAVFS+SF+ED PF+LAIGGSKGKLEVWDT+TD
Sbjct: 418  GSTDKMVKLWDLSNNEPSCLASTNPKAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTD 477

Query: 426  AGISRRYGKYNNQK 385
            A +SR+YG Y+ Q+
Sbjct: 478  AAVSRKYGNYSQQR 491


Top