BLASTX nr result

ID: Bupleurum21_contig00017377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017377
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312731.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_002277396.2| PREDICTED: protein ABCI12, chloroplastic-lik...   437   e-120
emb|CBI26163.3| unnamed protein product [Vitis vinifera]              429   e-118
ref|XP_004153425.1| PREDICTED: protein ABCI12, chloroplastic-lik...   420   e-115
ref|XP_004145039.1| PREDICTED: protein ABCI12, chloroplastic-lik...   420   e-115

>ref|XP_002312731.1| predicted protein [Populus trichocarpa] gi|222852551|gb|EEE90098.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  437 bits (1125), Expect = e-120
 Identities = 214/296 (72%), Positives = 251/296 (84%)
 Frame = +2

Query: 116  AQIDDGGGPKNWEKWVPKNVFSAEKVLKVISEATSSPICQFISSPVTFLHKVDPRIKLAW 295
            A +D+ G   NW   +P    S +K+ K+IS AT+SPI QFISSP TFLH VDPRIKL W
Sbjct: 55   ASVDNSGDTNNWVSRLPIGALSGDKIFKLISGATASPIGQFISSPTTFLHSVDPRIKLIW 114

Query: 296  XXXXXXXPARTNILMRFGLVAFLSSLSILMLPRHVWMDQLGRVSLLSGILFIMLGLGADG 475
                   PAR++I+MRFGLV +++ LS+L+LPRHVWMDQLGRVSLLSGILFI LGLG+DG
Sbjct: 115  LLALVVLPARSHIVMRFGLVVYIALLSVLVLPRHVWMDQLGRVSLLSGILFITLGLGSDG 174

Query: 476  VPPVVQLRTPTPSMMGLPSLPASLEGYSYIIMKWGPLQLTRKGLSVASTSACLTFTIFQS 655
            VPP+VQLRTP P++ GLP+LP SL GYSY+IMK GPLQ TRKGLSVAST+ACLTFT+FQS
Sbjct: 175  VPPLVQLRTPPPAITGLPNLPMSLSGYSYLIMKLGPLQFTRKGLSVASTAACLTFTVFQS 234

Query: 656  ASLCLSSTTPEQLAFALQWYMRPLAYIGVPVAEVILTLLLSLRFINLVFDEVRAVALGIV 835
            ASLCL++TTPEQLAFA++W+M PL YIGVPVAE+ LTLLLSLRFINLVFDEVR V+LGIV
Sbjct: 235  ASLCLATTTPEQLAFAMRWFMLPLRYIGVPVAEITLTLLLSLRFINLVFDEVRNVSLGIV 294

Query: 836  TRRIYWEKFTVIETIEVFFTYIRRIFNNIFSHAEQISQAMNVRGFRGDSNKHKIYF 1003
            +RRI W++ T+IETI++F +YIRRIF NIFSHAEQISQAM VRGFRGDSN HKIYF
Sbjct: 295  SRRIKWKQLTIIETIDIFASYIRRIFKNIFSHAEQISQAMIVRGFRGDSNSHKIYF 350


>ref|XP_002277396.2| PREDICTED: protein ABCI12, chloroplastic-like [Vitis vinifera]
          Length = 390

 Score =  437 bits (1123), Expect = e-120
 Identities = 211/302 (69%), Positives = 255/302 (84%)
 Frame = +2

Query: 98   PKISCSAQIDDGGGPKNWEKWVPKNVFSAEKVLKVISEATSSPICQFISSPVTFLHKVDP 277
            P++   A  ++ G   NW KW+P+ V +A+++L++IS ATSSPI QFISSP TFLH VDP
Sbjct: 57   PRLQIRATANNQGESGNWTKWLPRGVVAADRILRLISSATSSPISQFISSPTTFLHSVDP 116

Query: 278  RIKLAWXXXXXXXPARTNILMRFGLVAFLSSLSILMLPRHVWMDQLGRVSLLSGILFIML 457
            RIKL W       PAR++I+MRFGLV +L+ LS+ +LP  VWMDQLGRVS LSG+LFIML
Sbjct: 117  RIKLVWLLALVLLPARSHIIMRFGLVVYLACLSVWILPTQVWMDQLGRVSFLSGLLFIML 176

Query: 458  GLGADGVPPVVQLRTPTPSMMGLPSLPASLEGYSYIIMKWGPLQLTRKGLSVASTSACLT 637
            GLG+DG PP+VQLRTP P+MMGLP+LP SL GYSY++MK GPLQLTRKGLSVAST+ACLT
Sbjct: 177  GLGSDGAPPLVQLRTPPPAMMGLPNLPDSLGGYSYLVMKLGPLQLTRKGLSVASTAACLT 236

Query: 638  FTIFQSASLCLSSTTPEQLAFALQWYMRPLAYIGVPVAEVILTLLLSLRFINLVFDEVRA 817
            FTIFQSASLCL++TTPEQLA AL W+MRPL +IGVPVAE+ LTLLLSLRFI+LVFDEVR 
Sbjct: 237  FTIFQSASLCLTTTTPEQLASALWWFMRPLRFIGVPVAEITLTLLLSLRFISLVFDEVRN 296

Query: 818  VALGIVTRRIYWEKFTVIETIEVFFTYIRRIFNNIFSHAEQISQAMNVRGFRGDSNKHKI 997
            VALGI++RRI W++ T +ETI++F +Y+RRIF NIFSHAEQISQAM VRGFRGDS+ HK+
Sbjct: 297  VALGIISRRINWQQLTTMETIDIFVSYVRRIFKNIFSHAEQISQAMIVRGFRGDSSTHKL 356

Query: 998  YF 1003
            YF
Sbjct: 357  YF 358


>emb|CBI26163.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  429 bits (1103), Expect = e-118
 Identities = 211/311 (67%), Positives = 255/311 (81%), Gaps = 9/311 (2%)
 Frame = +2

Query: 98   PKISCSAQIDDGGGPKNWEKWVPKNVFSAEKVLKVISEATSSPICQFISSPVTFLHKVDP 277
            P++   A  ++ G   NW KW+P+ V +A+++L++IS ATSSPI QFISSP TFLH VDP
Sbjct: 57   PRLQIRATANNQGESGNWTKWLPRGVVAADRILRLISSATSSPISQFISSPTTFLHSVDP 116

Query: 278  RIKLAWXXXXXXXPARTNILMRFGLVAFLSSLSILMLPRHVWMDQLGRVSLLSGILFIML 457
            RIKL W       PAR++I+MRFGLV +L+ LS+ +LP  VWMDQLGRVS LSG+LFIML
Sbjct: 117  RIKLVWLLALVLLPARSHIIMRFGLVVYLACLSVWILPTQVWMDQLGRVSFLSGLLFIML 176

Query: 458  GLGADGVPPVVQLRTPTPSMMGLPSLPASLEGYSYIIMKWGPLQLTRKGLSVASTSACLT 637
            GLG+DG PP+VQLRTP P+MMGLP+LP SL GYSY++MK GPLQLTRKGLSVAST+ACLT
Sbjct: 177  GLGSDGAPPLVQLRTPPPAMMGLPNLPDSLGGYSYLVMKLGPLQLTRKGLSVASTAACLT 236

Query: 638  FT---------IFQSASLCLSSTTPEQLAFALQWYMRPLAYIGVPVAEVILTLLLSLRFI 790
            FT         IFQSASLCL++TTPEQLA AL W+MRPL +IGVPVAE+ LTLLLSLRFI
Sbjct: 237  FTAKINLFLCKIFQSASLCLTTTTPEQLASALWWFMRPLRFIGVPVAEITLTLLLSLRFI 296

Query: 791  NLVFDEVRAVALGIVTRRIYWEKFTVIETIEVFFTYIRRIFNNIFSHAEQISQAMNVRGF 970
            +LVFDEVR VALGI++RRI W++ T +ETI++F +Y+RRIF NIFSHAEQISQAM VRGF
Sbjct: 297  SLVFDEVRNVALGIISRRINWQQLTTMETIDIFVSYVRRIFKNIFSHAEQISQAMIVRGF 356

Query: 971  RGDSNKHKIYF 1003
            RGDS+ HK+YF
Sbjct: 357  RGDSSTHKLYF 367


>ref|XP_004153425.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 390

 Score =  420 bits (1080), Expect = e-115
 Identities = 204/296 (68%), Positives = 241/296 (81%)
 Frame = +2

Query: 116  AQIDDGGGPKNWEKWVPKNVFSAEKVLKVISEATSSPICQFISSPVTFLHKVDPRIKLAW 295
            A   D  G + W KW+P    +A+K+L+ I+ AT+SPI QFISSPVTFLH VDPRIKL W
Sbjct: 63   ASKSDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIW 122

Query: 296  XXXXXXXPARTNILMRFGLVAFLSSLSILMLPRHVWMDQLGRVSLLSGILFIMLGLGADG 475
                   PAR+NI +RFGLV FL+ LSI +LP  +W DQLGRVS+LSGILF+MLGLGADG
Sbjct: 123  LLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQLGRVSILSGILFVMLGLGADG 182

Query: 476  VPPVVQLRTPTPSMMGLPSLPASLEGYSYIIMKWGPLQLTRKGLSVASTSACLTFTIFQS 655
            VP ++Q RTP P MMGLP LPAS+ GYSY+I K GPL  TRKGLS+ASTSACLTF +FQS
Sbjct: 183  VPSLIQSRTPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 242

Query: 656  ASLCLSSTTPEQLAFALQWYMRPLAYIGVPVAEVILTLLLSLRFINLVFDEVRAVALGIV 835
            ASLCL++T PEQLAFA++W+M PL Y GVPVAE+ LTLLLSLRF++LVFDEVR VALGIV
Sbjct: 243  ASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGIV 302

Query: 836  TRRIYWEKFTVIETIEVFFTYIRRIFNNIFSHAEQISQAMNVRGFRGDSNKHKIYF 1003
            +RRI W+  T +ET++VFFTY+RRIF NIFSHAEQISQAM VRGFRGDS+ HK+YF
Sbjct: 303  SRRINWQMLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYF 358


>ref|XP_004145039.1| PREDICTED: protein ABCI12, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  420 bits (1080), Expect = e-115
 Identities = 204/296 (68%), Positives = 241/296 (81%)
 Frame = +2

Query: 116  AQIDDGGGPKNWEKWVPKNVFSAEKVLKVISEATSSPICQFISSPVTFLHKVDPRIKLAW 295
            A   D  G + W KW+P    +A+K+L+ I+ AT+SPI QFISSPVTFLH VDPRIKL W
Sbjct: 219  ASKSDDTGTEKWLKWIPNGALAADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIW 278

Query: 296  XXXXXXXPARTNILMRFGLVAFLSSLSILMLPRHVWMDQLGRVSLLSGILFIMLGLGADG 475
                   PAR+NI +RFGLV FL+ LSI +LP  +W DQLGRVS+LSGILF+MLGLGADG
Sbjct: 279  LLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQLGRVSILSGILFVMLGLGADG 338

Query: 476  VPPVVQLRTPTPSMMGLPSLPASLEGYSYIIMKWGPLQLTRKGLSVASTSACLTFTIFQS 655
            VP ++Q RTP P MMGLP LPAS+ GYSY+I K GPL  TRKGLS+ASTSACLTF +FQS
Sbjct: 339  VPSLIQSRTPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 398

Query: 656  ASLCLSSTTPEQLAFALQWYMRPLAYIGVPVAEVILTLLLSLRFINLVFDEVRAVALGIV 835
            ASLCL++T PEQLAFA++W+M PL Y GVPVAE+ LTLLLSLRF++LVFDEVR VALGIV
Sbjct: 399  ASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGIV 458

Query: 836  TRRIYWEKFTVIETIEVFFTYIRRIFNNIFSHAEQISQAMNVRGFRGDSNKHKIYF 1003
            +RRI W+  T +ET++VFFTY+RRIF NIFSHAEQISQAM VRGFRGDS+ HK+YF
Sbjct: 459  SRRINWQMLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYF 514


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