BLASTX nr result

ID: Bupleurum21_contig00017355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017355
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
gb|AFK47750.1| unknown [Lotus japonicus]                               87   1e-15
gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays]         84   1e-14
ref|XP_002465637.1| hypothetical protein SORBIDRAFT_01g042720 [S...    84   1e-14

>ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis]
           gi|223543079|gb|EEF44614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
 Frame = -1

Query: 339 NPRSVSPSCCQSKGPLSFKTXXXXXEDNNKRMMKIR---LSLEKVGKGLKESLSPKRKGD 169
           NPR +    CQ   P+   +     E   ++ + +R   +S EK  KG+K++LSPK+KGD
Sbjct: 25  NPRIIVHLSCQRDEPIDSSSPKVKEEMKQEKQVMVRQLFVSAEKFAKGVKDNLSPKQKGD 84

Query: 168 WKDLVLMSLSFAVYVYISQKLVCAYCVWTSMLKQ 67
           WKD+VLMSLSFAVYVYISQ++VCAYC WTSMLKQ
Sbjct: 85  WKDVVLMSLSFAVYVYISQQIVCAYCAWTSMLKQ 118


>ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -1

Query: 336 PRSVSPSCCQSKGPLSFKTXXXXXEDNNKRMMKIRL--SLEKVGKGLKESLSPKRKGDWK 163
           PR +    CQ   P+   +     E    + +  +L  S+E  GKGLK++LSPKRKGDWK
Sbjct: 26  PRILILLSCQRGEPIDTSSSKPKKEIKQDKQLVRQLFGSVENFGKGLKDNLSPKRKGDWK 85

Query: 162 DLVLMSLSFAVYVYISQKLVCAYCVWTSMLKQW 64
           D++LMSLSFAVYVY+SQK+VCAYC W SMLKQW
Sbjct: 86  DVMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQW 118


>gb|AFK47750.1| unknown [Lotus japonicus]
          Length = 123

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = -1

Query: 240 KIRLSLEKVGKGLKESLSPKRKGDWKDLVLMSLSFAVYVYISQKLVCAYCVWTSMLK 70
           K+    EK+GK  +++LSPK+KGDWKDL LMS+SFA+YVYISQKLVCAYC WTS+ K
Sbjct: 64  KVLNGFEKLGKRPEQNLSPKQKGDWKDLFLMSISFALYVYISQKLVCAYCAWTSLPK 120


>gb|AFW89184.1| hypothetical protein ZEAMMB73_915464 [Zea mays]
          Length = 177

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/56 (66%), Positives = 44/56 (78%)
 Frame = -1

Query: 240 KIRLSLEKVGKGLKESLSPKRKGDWKDLVLMSLSFAVYVYISQKLVCAYCVWTSML 73
           ++R  + K G   +ESLSPK+KGDWKD+ LMS SFAVYVYISQKLVC YC W SM+
Sbjct: 120 RLRGDVVKAGMAARESLSPKQKGDWKDVTLMSFSFAVYVYISQKLVCTYCAWLSMI 175


>ref|XP_002465637.1| hypothetical protein SORBIDRAFT_01g042720 [Sorghum bicolor]
           gi|241919491|gb|EER92635.1| hypothetical protein
           SORBIDRAFT_01g042720 [Sorghum bicolor]
          Length = 128

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/56 (66%), Positives = 44/56 (78%)
 Frame = -1

Query: 240 KIRLSLEKVGKGLKESLSPKRKGDWKDLVLMSLSFAVYVYISQKLVCAYCVWTSML 73
           ++R  + K G   +ESLSPK+KGDWKD+ LMS SFAVYVYISQKLVC YC W SM+
Sbjct: 71  RLRGDVVKAGMAARESLSPKQKGDWKDVTLMSFSFAVYVYISQKLVCTYCAWLSMI 126


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