BLASTX nr result

ID: Bupleurum21_contig00017341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017341
         (2213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   431   0.0  
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   429   0.0  
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   423   0.0  
ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago...   419   0.0  
ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   395   0.0  

>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 565

 Score =  431 bits (1108), Expect(2) = 0.0
 Identities = 208/264 (78%), Positives = 238/264 (90%)
 Frame = -1

Query: 1367 ATRFNDASSDFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFGMRDLTVSEIKQIAGRAG 1188
            A+ FNDASS+FDVLVASDAIGMGLNLNISRIIFSTM+KFDGF +RDLTV EIKQIAGRAG
Sbjct: 279  ASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLTVPEIKQIAGRAG 338

Query: 1187 RYGSKFPVGEVTCLNADDLPLLHSSLNAPSPVLKSAGLFPSFDLLYMYSRTNLESGLYQI 1008
            RYGS FPVGEVTC++ +DLPLLHSSLN+PSP+L+ AG+ P+FDL+YMYSR +  +G YQI
Sbjct: 339  RYGSNFPVGEVTCMDEEDLPLLHSSLNSPSPILERAGILPTFDLMYMYSRLHPRNGFYQI 398

Query: 1007 LEHFLQNAKLSANYFMTNIDDLLKVASVIDELPLGLHDKYLFCISPVDMDDDISSQGFIQ 828
            L HFL NAKLS NYF+ N + LLKVA+VIDELPLGLH+KYLFCISP DMDD+ISSQG  Q
Sbjct: 399  LAHFLDNAKLSENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLAQ 458

Query: 827  FAKNYSKNGVVRLKEIFTPGTLEVPKTPKALEELESIHKVLDLYVWLSYRLEESFPDREL 648
            FA+NY+K G+VRL+EIFTPG+L+VPKTP AL+ELESIHKVLDLYVWLS+RLEESFPD EL
Sbjct: 459  FAENYAKKGLVRLREIFTPGSLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHEL 518

Query: 647  ASSQKEICGLLIEEFLERFGWQKP 576
            A+SQK IC +LIEEFLER GWQKP
Sbjct: 519  AASQKAICSMLIEEFLERLGWQKP 542



 Score =  362 bits (930), Expect(2) = 0.0
 Identities = 169/220 (76%), Positives = 197/220 (89%)
 Frame = -2

Query: 2029 LTRPEAWYPTARKKKRTVILHVGPTNSGKTYHALKRLECSSSGIYCGPLRLLAWEVAKRL 1850
            LT P  WYP ARKK R +ILHVGPTNSGKT+HALK+LE S+SG+YCGPLRLLAWE+AKRL
Sbjct: 59   LTCPHTWYPQARKKHRRIILHVGPTNSGKTHHALKQLESSASGVYCGPLRLLAWEIAKRL 118

Query: 1849 NKEKVPCDLITGQERDEVDGAKHKAVTVEMADVASDFECAVIDEIQMIGCTTRGFSFTRA 1670
            NK +VPCDLITGQERDEVDGA HKAVTVEM DV++D++CAVIDEIQMIGC TRG+SFTRA
Sbjct: 119  NKAQVPCDLITGQERDEVDGANHKAVTVEMVDVSADYQCAVIDEIQMIGCITRGYSFTRA 178

Query: 1669 LLGISADELHLCGDAAAVSLVQKLLTVTGDDIKVQHYERLSPLIPSTVPLGSFTNIKTGD 1490
            LLGI+ADELHLCGD AAV L+Q+++ +TGD+I+VQ YERLSPL+P  VPLGSF+N++ GD
Sbjct: 179  LLGIAADELHLCGDPAAVPLIQEIMKITGDEIEVQFYERLSPLVPLKVPLGSFSNVRNGD 238

Query: 1489 CIVTFSRRKIYNLKKEIESGGKHLCSVVYGSLPPLTRSKQ 1370
            CIVTFSR++IY LKK IE  GKHLCSVVYGSLPP TR++Q
Sbjct: 239  CIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPETRTRQ 278


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  429 bits (1104), Expect(2) = 0.0
 Identities = 210/270 (77%), Positives = 245/270 (90%), Gaps = 2/270 (0%)
 Frame = -1

Query: 1367 ATRFNDASSDFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFGMRDLTVSEIKQIAGRAG 1188
            AT FNDASS+FDVLVASDAIGMGLNLNISRIIFSTM+KFDG  MRDLT+SE+KQIAGRAG
Sbjct: 284  ATMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGVEMRDLTISEVKQIAGRAG 343

Query: 1187 RYGSKFPVGEVTCLNADDLPLLHSSLNAPSPVLKSAGLFPSFDLLYMYSRTNLESGLYQI 1008
            RYGS FPVGEVTCL+ADDLPLLHSSL +PSP+L+ AGLFP+FDL++MYSR + + GLY+I
Sbjct: 344  RYGSDFPVGEVTCLHADDLPLLHSSLKSPSPILECAGLFPTFDLIFMYSRLHPKKGLYRI 403

Query: 1007 LEHFLQNAKLSANYFMTNIDDLLKVASVIDELPLGLHDKYLFCISPVDMDDDISSQGFIQ 828
            +EHFL+NAKLS NYF+ N +++LKVA+V+D LP+ LHDKYLF ISPVDM ++ISSQG  Q
Sbjct: 404  MEHFLENAKLSENYFIANCEEMLKVAAVVDVLPISLHDKYLFVISPVDMRNEISSQGLTQ 463

Query: 827  FAKNYSKNGVVRLKEIFTPGTLEVPKTPKALEELESIHKVLDLYVWLSYRLEESFPDREL 648
            FA+NY++ G+VRLKEIFTPGTL+VPKT  AL+ELESIHKVLDLYVWLS+RLE+SFPDREL
Sbjct: 464  FAQNYAQKGIVRLKEIFTPGTLQVPKTESALKELESIHKVLDLYVWLSFRLEDSFPDREL 523

Query: 647  ASSQKEICGLLIEEFLERFGWQK--PSRKL 564
            A+SQK ICGLLIEEFLERFGWQK   +RKL
Sbjct: 524  AASQKAICGLLIEEFLERFGWQKQPKTRKL 553



 Score =  363 bits (933), Expect(2) = 0.0
 Identities = 174/220 (79%), Positives = 194/220 (88%)
 Frame = -2

Query: 2029 LTRPEAWYPTARKKKRTVILHVGPTNSGKTYHALKRLECSSSGIYCGPLRLLAWEVAKRL 1850
            LT P AWYP AR+K R + LHVGPTNSGKTYHALK+LE S SG+YCGPLRLLAWEVAKRL
Sbjct: 64   LTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLESSPSGVYCGPLRLLAWEVAKRL 123

Query: 1849 NKEKVPCDLITGQERDEVDGAKHKAVTVEMADVASDFECAVIDEIQMIGCTTRGFSFTRA 1670
            NK  VPCDLITGQER+EV+GAKHKAVTVEMADV S++ CAV+DEIQM+GC TRGFSFTRA
Sbjct: 124  NKANVPCDLITGQEREEVNGAKHKAVTVEMADVTSNYSCAVVDEIQMLGCMTRGFSFTRA 183

Query: 1669 LLGISADELHLCGDAAAVSLVQKLLTVTGDDIKVQHYERLSPLIPSTVPLGSFTNIKTGD 1490
            LLGISADELHLCGD AAV L+Q++L  TGDDI VQ+YERLSPL+PS  PLGSF NI+TGD
Sbjct: 184  LLGISADELHLCGDPAAVPLIQEILKPTGDDIHVQYYERLSPLVPSQKPLGSFKNIQTGD 243

Query: 1489 CIVTFSRRKIYNLKKEIESGGKHLCSVVYGSLPPLTRSKQ 1370
            CIVTFSRR+IY LK +IE G KHLCSVVYGSLPP TR++Q
Sbjct: 244  CIVTFSRREIYKLKGQIERGRKHLCSVVYGSLPPETRTRQ 283


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 600

 Score =  423 bits (1088), Expect(2) = 0.0
 Identities = 206/264 (78%), Positives = 236/264 (89%)
 Frame = -1

Query: 1367 ATRFNDASSDFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFGMRDLTVSEIKQIAGRAG 1188
            A+ FNDASS+FDVLVASDAIGMGLNLNISRIIFSTM+KFDGF +RDL+V EIKQIAGRAG
Sbjct: 314  ASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLSVPEIKQIAGRAG 373

Query: 1187 RYGSKFPVGEVTCLNADDLPLLHSSLNAPSPVLKSAGLFPSFDLLYMYSRTNLESGLYQI 1008
            RYGS FPVGEVTC++ +DL LLHSSLN+PSP+L+ AGL P+FDL+YMYSR +  +G YQI
Sbjct: 374  RYGSNFPVGEVTCMDEEDLLLLHSSLNSPSPILERAGLLPTFDLMYMYSRLHPRNGFYQI 433

Query: 1007 LEHFLQNAKLSANYFMTNIDDLLKVASVIDELPLGLHDKYLFCISPVDMDDDISSQGFIQ 828
            L HFL +AKLS NYF+ N + LLKVA+VIDELPLGLH+KYLFCISP DMDD+ISSQG  Q
Sbjct: 434  LAHFLDHAKLSENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLTQ 493

Query: 827  FAKNYSKNGVVRLKEIFTPGTLEVPKTPKALEELESIHKVLDLYVWLSYRLEESFPDREL 648
            FA+NY+K G+VRL+EIFTPG+L+VPKTP AL+ELESIHKVLDLYVWLS+RLEESFPD EL
Sbjct: 494  FAENYAKKGLVRLREIFTPGSLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHEL 553

Query: 647  ASSQKEICGLLIEEFLERFGWQKP 576
            A SQK IC +LIEEFLER GWQKP
Sbjct: 554  AVSQKAICSMLIEEFLERLGWQKP 577



 Score =  364 bits (934), Expect(2) = 0.0
 Identities = 170/220 (77%), Positives = 199/220 (90%)
 Frame = -2

Query: 2029 LTRPEAWYPTARKKKRTVILHVGPTNSGKTYHALKRLECSSSGIYCGPLRLLAWEVAKRL 1850
            LT P  WYP AR+K R VILHVGPTNSGKT+HALK+LE S+SG+YCGPLRLLAWE+AKRL
Sbjct: 94   LTCPHTWYPQARRKHRRVILHVGPTNSGKTHHALKQLESSASGVYCGPLRLLAWEIAKRL 153

Query: 1849 NKEKVPCDLITGQERDEVDGAKHKAVTVEMADVASDFECAVIDEIQMIGCTTRGFSFTRA 1670
            NK +VPCDLITGQER+EVDGA HKAVTVEMAD+++D++CAVIDEIQMIGCTTRG+SFTRA
Sbjct: 154  NKAQVPCDLITGQEREEVDGANHKAVTVEMADLSADYQCAVIDEIQMIGCTTRGYSFTRA 213

Query: 1669 LLGISADELHLCGDAAAVSLVQKLLTVTGDDIKVQHYERLSPLIPSTVPLGSFTNIKTGD 1490
            LLGI+ADELHLCGD AAV L+Q++L +TGD+I+VQ YERLSPL+P  VPLGSF+N++ GD
Sbjct: 214  LLGIAADELHLCGDPAAVPLIQEILKITGDEIEVQFYERLSPLVPLNVPLGSFSNVRNGD 273

Query: 1489 CIVTFSRRKIYNLKKEIESGGKHLCSVVYGSLPPLTRSKQ 1370
            CIVTFSR++IY LKK IE  GKHLCSVVYGSLPP TR++Q
Sbjct: 274  CIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPETRTRQ 313


>ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago truncatula]
            gi|355512092|gb|AES93715.1| ATP-dependent RNA helicase
            SUPV3L1 [Medicago truncatula]
          Length = 570

 Score =  419 bits (1076), Expect(2) = 0.0
 Identities = 198/264 (75%), Positives = 235/264 (89%)
 Frame = -1

Query: 1367 ATRFNDASSDFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFGMRDLTVSEIKQIAGRAG 1188
            A+ FNDASS+FDVLVASDAIGMGLNLNISRIIFSTM+KFDGF MRDLTV EIKQIAGRAG
Sbjct: 284  ASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMQKFDGFQMRDLTVPEIKQIAGRAG 343

Query: 1187 RYGSKFPVGEVTCLNADDLPLLHSSLNAPSPVLKSAGLFPSFDLLYMYSRTNLESGLYQI 1008
            RYGS FP+GEVTC++ DDLPLLHS+L++PSP+L+ AGL PS++LLYMYSR + ++G YQ+
Sbjct: 344  RYGSNFPLGEVTCMSGDDLPLLHSALDSPSPILERAGLLPSYELLYMYSRLHPQAGFYQV 403

Query: 1007 LEHFLQNAKLSANYFMTNIDDLLKVASVIDELPLGLHDKYLFCISPVDMDDDISSQGFIQ 828
            LEHF+ NAKLS  YF+ N D +LKVA+V+DE PL L DKYLFCISP DMDD+ISSQG  Q
Sbjct: 404  LEHFVDNAKLSEKYFIVNCDQVLKVAAVVDEFPLELRDKYLFCISPADMDDEISSQGLTQ 463

Query: 827  FAKNYSKNGVVRLKEIFTPGTLEVPKTPKALEELESIHKVLDLYVWLSYRLEESFPDREL 648
            F +NY+K G+VRL+EIFTPGTL+VP TP+AL++LESIHKVLDLYVWLS+RLE+SFPD EL
Sbjct: 464  FVENYAKKGLVRLREIFTPGTLKVPTTPQALKDLESIHKVLDLYVWLSFRLEDSFPDHEL 523

Query: 647  ASSQKEICGLLIEEFLERFGWQKP 576
            A SQK +C +LIEEFL+R+GWQKP
Sbjct: 524  AKSQKALCSMLIEEFLDRYGWQKP 547



 Score =  352 bits (903), Expect(2) = 0.0
 Identities = 165/220 (75%), Positives = 194/220 (88%)
 Frame = -2

Query: 2029 LTRPEAWYPTARKKKRTVILHVGPTNSGKTYHALKRLECSSSGIYCGPLRLLAWEVAKRL 1850
            +T P  WYP AR+K+R V LHVGPTNSGKTY ALK+L+ S+SGIYCGPLRLLAWEVAKRL
Sbjct: 64   MTCPHTWYPLARRKRRRVFLHVGPTNSGKTYQALKQLQSSASGIYCGPLRLLAWEVAKRL 123

Query: 1849 NKEKVPCDLITGQERDEVDGAKHKAVTVEMADVASDFECAVIDEIQMIGCTTRGFSFTRA 1670
            NK  VPCDLITGQERDEV+GA HKAVTVEMADV++D++CAVIDEIQM+GC TRG+SFTRA
Sbjct: 124  NKANVPCDLITGQERDEVEGAHHKAVTVEMADVSTDYKCAVIDEIQMLGCNTRGYSFTRA 183

Query: 1669 LLGISADELHLCGDAAAVSLVQKLLTVTGDDIKVQHYERLSPLIPSTVPLGSFTNIKTGD 1490
            LLGI+ADELHLCGD AAV L+Q++L +TGD+++VQ+YERLSPL+P  VPL S ++++ GD
Sbjct: 184  LLGIAADELHLCGDPAAVPLIQEILDITGDELEVQYYERLSPLVPMKVPLRSLSDVRNGD 243

Query: 1489 CIVTFSRRKIYNLKKEIESGGKHLCSVVYGSLPPLTRSKQ 1370
            CIVTFSRR IY LKK IE  GKHLCSVVYGSLPP TR++Q
Sbjct: 244  CIVTFSRRDIYKLKKRIEREGKHLCSVVYGSLPPETRTRQ 283


>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Vitis vinifera]
          Length = 572

 Score =  395 bits (1014), Expect(2) = 0.0
 Identities = 193/264 (73%), Positives = 233/264 (88%)
 Frame = -1

Query: 1367 ATRFNDASSDFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFGMRDLTVSEIKQIAGRAG 1188
            AT FNDA+S+FDVLVASDAIGMGLNLNISRIIFST++KFDG   RDLTV EIKQIAGRAG
Sbjct: 286  ATMFNDATSEFDVLVASDAIGMGLNLNISRIIFSTLKKFDGIEERDLTVPEIKQIAGRAG 345

Query: 1187 RYGSKFPVGEVTCLNADDLPLLHSSLNAPSPVLKSAGLFPSFDLLYMYSRTNLESGLYQI 1008
            R+GSKFP GEVTC+N  DLPLLHSSL + SPVL+ AGLFP+FDLL+M+SR +    LYQ+
Sbjct: 346  RFGSKFPDGEVTCMNVKDLPLLHSSLKSLSPVLERAGLFPTFDLLFMHSRFHPTKSLYQM 405

Query: 1007 LEHFLQNAKLSANYFMTNIDDLLKVASVIDELPLGLHDKYLFCISPVDMDDDISSQGFIQ 828
            LEHF+ NAKLS+NYF+ + +++LKVA+++DELPLGLHDKYLF ISPVDM++DISSQG IQ
Sbjct: 406  LEHFVDNAKLSSNYFIADCEEMLKVAAIVDELPLGLHDKYLFVISPVDMNNDISSQGLIQ 465

Query: 827  FAKNYSKNGVVRLKEIFTPGTLEVPKTPKALEELESIHKVLDLYVWLSYRLEESFPDREL 648
            FA+ Y+K G+VRL+EIFTPGTL+VPK+  AL+ELESI++VLDLYVWLS+RLE+SF DREL
Sbjct: 466  FAQTYAKKGIVRLREIFTPGTLQVPKSHSALKELESIYQVLDLYVWLSFRLEDSFLDREL 525

Query: 647  ASSQKEICGLLIEEFLERFGWQKP 576
            A SQ+ IC +LIE FLER GW++P
Sbjct: 526  ALSQRAICSMLIEGFLERGGWRQP 549



 Score =  367 bits (941), Expect(2) = 0.0
 Identities = 172/220 (78%), Positives = 197/220 (89%)
 Frame = -2

Query: 2029 LTRPEAWYPTARKKKRTVILHVGPTNSGKTYHALKRLECSSSGIYCGPLRLLAWEVAKRL 1850
            LT P  WYP AR+K R VI+HVGPTNSGKT+HALKRLE SSSGIYCGPLRLLAWEVAKRL
Sbjct: 66   LTHPHTWYPNARRKSRKVIMHVGPTNSGKTHHALKRLESSSSGIYCGPLRLLAWEVAKRL 125

Query: 1849 NKEKVPCDLITGQERDEVDGAKHKAVTVEMADVASDFECAVIDEIQMIGCTTRGFSFTRA 1670
            NK  VPCD+ITGQER+E+DGAKHKA+TVEMADV SD+ CAVIDEIQM+GC TRGFSFTRA
Sbjct: 126  NKANVPCDMITGQEREEIDGAKHKAMTVEMADVTSDYHCAVIDEIQMLGCRTRGFSFTRA 185

Query: 1669 LLGISADELHLCGDAAAVSLVQKLLTVTGDDIKVQHYERLSPLIPSTVPLGSFTNIKTGD 1490
            LLGIS DELHLCGD ++V L+Q +L VTGDD +VQ+YERLSPL+P  VPL SF++I+TGD
Sbjct: 186  LLGISTDELHLCGDVSSVPLIQGILKVTGDDFEVQYYERLSPLVPLNVPLRSFSDIQTGD 245

Query: 1489 CIVTFSRRKIYNLKKEIESGGKHLCSVVYGSLPPLTRSKQ 1370
            CIVTFSRR+IY LK++IE+GGKHLCSVVYGSLPP TR++Q
Sbjct: 246  CIVTFSRRQIYKLKRQIENGGKHLCSVVYGSLPPETRTRQ 285