BLASTX nr result

ID: Bupleurum21_contig00017332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017332
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301529.1| predicted protein [Populus trichocarpa] gi|2...   210   8e-53
ref|XP_002320962.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplasti...   202   2e-50
ref|XP_002515241.1| Nitrogen fixation protein nifU, putative [Ri...   201   7e-50
gb|AFK34471.1| unknown [Lotus japonicus]                              196   1e-48

>ref|XP_002301529.1| predicted protein [Populus trichocarpa] gi|222843255|gb|EEE80802.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  210 bits (535), Expect = 8e-53
 Identities = 105/122 (86%), Positives = 111/122 (90%)
 Frame = -1

Query: 368 AQELELNPQNVDTVLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACGTCPSSTTTMKMG 189
           AQ+ ELNPQNVD VLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACG CPSSTTTMKMG
Sbjct: 65  AQQFELNPQNVDLVLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACGDCPSSTTTMKMG 124

Query: 188 IERVLKEKFGNAVKDIRQVFDEQPAETTVEAVNDHLDILRPAIKNFGGNVDVLSVEGGEC 9
           IERVLKEKFG+A+KDIRQV DE+  ETTVE VN HLDILRPAI NFGG+V+VLSVE GEC
Sbjct: 125 IERVLKEKFGDAIKDIRQVSDEESKETTVERVNGHLDILRPAITNFGGSVEVLSVENGEC 184

Query: 8   HV 3
            V
Sbjct: 185 RV 186


>ref|XP_002320962.1| predicted protein [Populus trichocarpa] gi|222861735|gb|EEE99277.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  204 bits (519), Expect = 6e-51
 Identities = 101/122 (82%), Positives = 111/122 (90%)
 Frame = -1

Query: 368 AQELELNPQNVDTVLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACGTCPSSTTTMKMG 189
           AQ+ ELNPQNVD VLEEVRPYLI+DGGNVDVVSVEDGVI+LKLQGACG C SS TTMKMG
Sbjct: 69  AQQFELNPQNVDLVLEEVRPYLISDGGNVDVVSVEDGVITLKLQGACGNCASSETTMKMG 128

Query: 188 IERVLKEKFGNAVKDIRQVFDEQPAETTVEAVNDHLDILRPAIKNFGGNVDVLSVEGGEC 9
           IERVLKEKFG+AV+DIRQ+  E+P ETTVEA+NDHLDILRPAIKNFGG+V+VLSVE G C
Sbjct: 129 IERVLKEKFGDAVQDIRQLSFEEPKETTVEAINDHLDILRPAIKNFGGSVEVLSVENGGC 188

Query: 8   HV 3
            V
Sbjct: 189 RV 190


>ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplastic [Vitis vinifera]
           gi|297744011|emb|CBI36981.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  202 bits (515), Expect = 2e-50
 Identities = 100/122 (81%), Positives = 111/122 (90%)
 Frame = -1

Query: 368 AQELELNPQNVDTVLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACGTCPSSTTTMKMG 189
           A + EL  +NVD VLE+VRPYLI+DGGNVDVVSVEDGVISLKLQGACG+CPSSTTTM MG
Sbjct: 62  AHKFELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTTTMTMG 121

Query: 188 IERVLKEKFGNAVKDIRQVFDEQPAETTVEAVNDHLDILRPAIKNFGGNVDVLSVEGGEC 9
           IERVLKEKFG+AVKDIRQV+DEQ  ETTVEAVN HLDILRPAIKN+G +VDVLS+EGG+C
Sbjct: 122 IERVLKEKFGDAVKDIRQVYDEQTGETTVEAVNRHLDILRPAIKNYGSSVDVLSIEGGDC 181

Query: 8   HV 3
            V
Sbjct: 182 LV 183


>ref|XP_002515241.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223545721|gb|EEF47225.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 210

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/122 (81%), Positives = 112/122 (91%)
 Frame = -1

Query: 368 AQELELNPQNVDTVLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACGTCPSSTTTMKMG 189
           AQ+ EL P+NVD VLE+VRPYLIADGGNVDVVSVEDGVISL+LQGACG+CPSSTTTMKMG
Sbjct: 59  AQKFELTPENVDLVLEDVRPYLIADGGNVDVVSVEDGVISLQLQGACGSCPSSTTTMKMG 118

Query: 188 IERVLKEKFGNAVKDIRQVFDEQPAETTVEAVNDHLDILRPAIKNFGGNVDVLSVEGGEC 9
           IERVLKEKFG++VKDIRQV DE+  ETT EAVN HLDILRPAIKN+GG+V+V+S+E GEC
Sbjct: 119 IERVLKEKFGDSVKDIRQVNDEEVKETTPEAVNRHLDILRPAIKNYGGSVEVVSIESGEC 178

Query: 8   HV 3
            V
Sbjct: 179 LV 180


>gb|AFK34471.1| unknown [Lotus japonicus]
          Length = 225

 Score =  196 bits (499), Expect = 1e-48
 Identities = 96/122 (78%), Positives = 111/122 (90%)
 Frame = -1

Query: 368 AQELELNPQNVDTVLEEVRPYLIADGGNVDVVSVEDGVISLKLQGACGTCPSSTTTMKMG 189
           A + +L   NVD VLE+VRPYLI+DGGNV+VVSVE+GVISLKLQGAC +CPSSTTTMK+G
Sbjct: 66  AAKFDLTAPNVDLVLEDVRPYLISDGGNVEVVSVENGVISLKLQGACESCPSSTTTMKLG 125

Query: 188 IERVLKEKFGNAVKDIRQVFDEQPAETTVEAVNDHLDILRPAIKNFGGNVDVLSVEGGEC 9
           IERVLKEKFG+AVKDI QV+DE+P ETTVEAVN+HL+ILRPAIKNFGG+V VLSVEG +C
Sbjct: 126 IERVLKEKFGDAVKDIVQVYDEEPKETTVEAVNNHLEILRPAIKNFGGSVQVLSVEGSDC 185

Query: 8   HV 3
           HV
Sbjct: 186 HV 187


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