BLASTX nr result

ID: Bupleurum21_contig00017297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017297
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306750.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002528046.1| RNA binding protein, putative [Ricinus commu...    67   1e-09
gb|AAF24825.1|AC007592_18 F12K11.11 [Arabidopsis thaliana]             65   6e-09
ref|NP_172143.3| NOL1/NOP2/sun-like protein [Arabidopsis thalian...    65   6e-09
ref|XP_004162289.1| PREDICTED: LOW QUALITY PROTEIN: putative met...    63   2e-08

>ref|XP_002306750.1| predicted protein [Populus trichocarpa] gi|222856199|gb|EEE93746.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = +2

Query: 80  YSCICVNTLKTTTNAAVENISKILEETWQPKHHTSDDMFASSAIDCDILEDSDIGQNSNI 259
           YSC+ VNTLK+T++A +E + +I++E                  D D       G N N+
Sbjct: 42  YSCVRVNTLKSTSDAVIEKLLEIIKE---------------KGFDGDCHGKEGSGTNENV 86

Query: 260 NLFTGDG-QSGPIFRCQLPGLDYVLFVRGSGPHAI 361
                +  ++GPI +CQ+PGL+YVLFV+G+GPH I
Sbjct: 87  GSPLEESLKNGPIVKCQIPGLEYVLFVKGTGPHMI 121


>ref|XP_002528046.1| RNA binding protein, putative [Ricinus communis]
           gi|223532576|gb|EEF34364.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 586

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/94 (43%), Positives = 52/94 (55%)
 Frame = +2

Query: 80  YSCICVNTLKTTTNAAVENISKILEETWQPKHHTSDDMFASSAIDCDILEDSDIGQNSNI 259
           YSCI VNTLKTT +A VE + + ++ET              S  DC     S+ G+N   
Sbjct: 74  YSCIRVNTLKTTADAVVEKLMEFVKET--------------SFEDC-----SEAGRNDIE 114

Query: 260 NLFTGDGQSGPIFRCQLPGLDYVLFVRGSGPHAI 361
           +         PI +CQ+PGLDYVLFV+GSGPH I
Sbjct: 115 DRLC----KSPITKCQIPGLDYVLFVKGSGPHMI 144


>gb|AAF24825.1|AC007592_18 F12K11.11 [Arabidopsis thaliana]
          Length = 301

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/94 (41%), Positives = 51/94 (54%)
 Frame = +2

Query: 80  YSCICVNTLKTTTNAAVENISKILEETWQPKHHTSDDMFASSAIDCDILEDSDIGQNSNI 259
           YSCI VNT+KTT++A +E ++KIL                          DS+ G    +
Sbjct: 85  YSCIRVNTVKTTSDAVIEKLTKILN-------------------------DSEEG----L 115

Query: 260 NLFTGDGQSGPIFRCQLPGLDYVLFVRGSGPHAI 361
            L   DG S P+ +CQ+PGLDYV+FV GSGPH I
Sbjct: 116 KLVQPDGSS-PVTKCQIPGLDYVVFVNGSGPHKI 148


>ref|NP_172143.3| NOL1/NOP2/sun-like protein [Arabidopsis thaliana]
           gi|30102680|gb|AAP21258.1| At1g06560 [Arabidopsis
           thaliana] gi|110743735|dbj|BAE99704.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332189884|gb|AEE28005.1| NOL1/NOP2/sun-like protein
           [Arabidopsis thaliana]
          Length = 599

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/94 (41%), Positives = 51/94 (54%)
 Frame = +2

Query: 80  YSCICVNTLKTTTNAAVENISKILEETWQPKHHTSDDMFASSAIDCDILEDSDIGQNSNI 259
           YSCI VNT+KTT++A +E ++KIL                          DS+ G    +
Sbjct: 85  YSCIRVNTVKTTSDAVIEKLTKILN-------------------------DSEEG----L 115

Query: 260 NLFTGDGQSGPIFRCQLPGLDYVLFVRGSGPHAI 361
            L   DG S P+ +CQ+PGLDYV+FV GSGPH I
Sbjct: 116 KLVQPDGSS-PVTKCQIPGLDYVVFVNGSGPHKI 148


>ref|XP_004162289.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase
           NSUN6-like [Cucumis sativus]
          Length = 559

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/94 (41%), Positives = 48/94 (51%)
 Frame = +2

Query: 80  YSCICVNTLKTTTNAAVENISKILEETWQPKHHTSDDMFASSAIDCDILEDSDIGQNSNI 259
           YSCI VNTLK+TT+  +E +S I++E                 + C          NS  
Sbjct: 50  YSCIRVNTLKSTTDTVIEKLSTIVKE-----------------MGC---------SNSEN 83

Query: 260 NLFTGDGQSGPIFRCQLPGLDYVLFVRGSGPHAI 361
              T   Q   I RCQ+PGLDYV+FVRGSGPH I
Sbjct: 84  KPVTEKFQHPSISRCQVPGLDYVVFVRGSGPHTI 117


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