BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017292
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              300   2e-79
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   298   8e-79
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   271   1e-70
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   262   7e-68
ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyra...   259   4e-67

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  300 bits (768), Expect = 2e-79
 Identities = 128/192 (66%), Positives = 150/192 (78%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6   SFPISGCTHIYCSDCIHSYIASKLQENITQITCPVPGCCGLLQPEDCRHILPREVFDRWG 185
           SF I GC H YCSDC+  Y+ASKLQ+N+++I+CP P C G+L+P+ CR ILP  VFDRWG
Sbjct: 137 SFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWG 196

Query: 186 AALCEAVILDSQKLYCPYKDCSAMLINDSGTVFTLSNCQFCERYFCAQCNVPWHMGMDCG 365
            ALCEA+IL SQK YCPYKDCSA+LI D G V   S C  C R FCAQC VPWH G+DCG
Sbjct: 197 NALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCG 256

Query: 366 EFQSLNKDEREAEDIMLMQLAKNNKWIRCPKCRFYVEKSYGCLYMRCRCGHSFCYNCG-- 539
           EFQ LNKDER  EDI++M LAK N W RCPKC+FYVEKS+GC+Y+RCRCG +FCYNCG  
Sbjct: 257 EFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAP 316

Query: 540 TALISHNCPTCR 575
           ++ ISH CP CR
Sbjct: 317 SSTISHICPHCR 328


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  298 bits (763), Expect = 8e-79
 Identities = 127/191 (66%), Positives = 149/191 (78%), Gaps = 2/191 (1%)
 Frame = +3

Query: 6   SFPISGCTHIYCSDCIHSYIASKLQENITQITCPVPGCCGLLQPEDCRHILPREVFDRWG 185
           SF I GC H YCSDC+  Y+ASKLQ+N+++I+CP P C G+L+P+ CR ILP  VFDRWG
Sbjct: 137 SFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWG 196

Query: 186 AALCEAVILDSQKLYCPYKDCSAMLINDSGTVFTLSNCQFCERYFCAQCNVPWHMGMDCG 365
            ALCEA+IL SQK YCPYKDCSA+LI D G V   S C  C R FCAQC VPWH G+DCG
Sbjct: 197 NALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCG 256

Query: 366 EFQSLNKDEREAEDIMLMQLAKNNKWIRCPKCRFYVEKSYGCLYMRCRCGHSFCYNCG-- 539
           EFQ LNKDER  EDI++M LAK N W RCPKC+FYVEKS+GC+Y+RCRCG +FCYNCG  
Sbjct: 257 EFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAP 316

Query: 540 TALISHNCPTC 572
           ++ ISH CP C
Sbjct: 317 SSTISHICPHC 327


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  271 bits (693), Expect = 1e-70
 Identities = 119/194 (61%), Positives = 143/194 (73%), Gaps = 3/194 (1%)
 Frame = +3

Query: 3   DSFPISGCTHIYCSDCIHSYIASKLQENITQITCPVPGCCGLLQPEDCRHILPREVFDRW 182
           +SF I GCTH YC++C+  Y++SKLQENIT+I CPVP C G L+PEDCR +LP  VFDRW
Sbjct: 111 NSFLIKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRW 170

Query: 183 GAALCEAVILDSQKLYCPYKDCSAMLINDSGTVFTLSNCQFCERYFCAQCNVPWHMGMDC 362
           G ALCEAVIL SQK YCP+KDCSAMLI+D   V   S C  C R FCAQC VPWH  + C
Sbjct: 171 GNALCEAVILGSQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISC 230

Query: 363 GEFQSLNKDEREAEDIMLMQLAKNNKWIRCPKCRFYVEKSYGCLYMRCRCGHSFCYNCGT 542
            E++ L+KDERE +DI+LM LAKN  W RCPKCR +VEK  GC YM+CRCG  FCY+CG+
Sbjct: 231 EEYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQFCYSCGS 290

Query: 543 A---LISHNCPTCR 575
                ++H C  C+
Sbjct: 291 TDLNPVTHYCYKCK 304


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  262 bits (669), Expect = 7e-68
 Identities = 116/180 (64%), Positives = 136/180 (75%)
 Frame = +3

Query: 3   DSFPISGCTHIYCSDCIHSYIASKLQENITQITCPVPGCCGLLQPEDCRHILPREVFDRW 182
           +S  I GCTH YC+DC+  Y+ASK+QENIT I CPV GC GLL+PE CR ILP+EVFDRW
Sbjct: 218 ESLAIRGCTHAYCTDCMAKYVASKIQENITGIYCPVSGCGGLLEPEYCRSILPQEVFDRW 277

Query: 183 GAALCEAVILDSQKLYCPYKDCSAMLINDSGTVFTLSNCQFCERYFCAQCNVPWHMGMDC 362
           G ALCEA+ L SQK YCP+KDCSAMLIND G V   S C  C R FCA C VPWH G+DC
Sbjct: 278 GNALCEALNLGSQKFYCPFKDCSAMLINDGGEVIRESECPHCRRLFCAHCKVPWHSGIDC 337

Query: 363 GEFQSLNKDEREAEDIMLMQLAKNNKWIRCPKCRFYVEKSYGCLYMRCRCGHSFCYNCGT 542
            +FQ+L+KDERE EDIMLM+LA+N KW RCP CR YVE++ GC YM+CR     C+ C +
Sbjct: 338 NKFQTLHKDEREKEDIMLMKLAENKKWRRCPICRIYVERTEGCRYMKCRYIFICCFVCSS 397


>ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323773|gb|EFH54194.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  259 bits (662), Expect = 4e-67
 Identities = 110/194 (56%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   DSFPISGCTHIYCSDCIHSYIASKLQENITQITCPVPGCCGLLQPEDCRHILPREVFDRW 182
           ++F I GC+H YC+DC+  YIA+KLQ+NI  I CPV GC G L+P+ CR ILPREVFDRW
Sbjct: 129 ETFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCRQILPREVFDRW 188

Query: 183 GAALCEAVILDSQKLYCPYKDCSAMLINDSGTVFTLSNCQFCERYFCAQCNVPWHMGMDC 362
           G ALCEAV++ S++ YCPYKDCSA+L  D   V   S C  C R  C +C   WH  M C
Sbjct: 189 GDALCEAVVMRSKRFYCPYKDCSALLFMDESEVMKDSECPHCHRMVCVECGTKWHPEMTC 248

Query: 363 GEFQSLNKDEREAEDIMLMQLAKNNKWIRCPKCRFYVEKSYGCLYMRCRCGHSFCYNCGT 542
            EFQ L ++ER  +DI+L  +AK  KW RCP C+FY+EKS+GCLYM+CRCG +FCYNCGT
Sbjct: 249 EEFQKLAENERGRDDILLATMAKKKKWKRCPSCKFYIEKSHGCLYMKCRCGLAFCYNCGT 308

Query: 543 AL--ISHNCPTCRQ 578
                SH C  C++
Sbjct: 309 PSRDHSHYCYNCKR 322