BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017286
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   441   e-121
ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...   430   e-118
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha...   415   e-113
ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|A...   413   e-113

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
            protein product [Vitis vinifera]
          Length = 421

 Score =  441 bits (1135), Expect = e-121
 Identities = 227/283 (80%), Positives = 252/283 (89%), Gaps = 1/283 (0%)
 Frame = +2

Query: 179  MARLIKSVSFLKNTLLTPQGLREGLVGTSSHIRCFSSKGKRKSKSELSDSGEENLSKKDL 358
            MARL+++ S L+++L   +G R+G++GTSS    FSSKG+R+SKS+ SDS EENLSKK+L
Sbjct: 1    MARLLRNASSLRHSLFAVEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKEL 60

Query: 359  ALKQALDQITTTFGKGSIMWLGRSVAPKEVPVVSTGSFALDIALGIGGLPKGRVVEIYGP 538
            AL+QALDQITT+FGKGSIMWLGRSV+ K VPVVSTGSFALDI LGIGGLPKGRVVEIYGP
Sbjct: 61   ALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGP 120

Query: 539  EASGKTTLALHVIAEAQKQGGYCVFIDAEHALDPVLAKSIGVNTENLLLSQPDCGEQALS 718
            EASGKTTLALHVIAEAQKQGGYCVF+DAEHALDP LA++IGVNT+NLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALS 180

Query: 719  LVDTIIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 898
            LVDT+IRSG            LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 899  ILIFINQVRAKLS-ITGFGGPTEVTCGGNALKFYASMRLNVRR 1024
            ILIFINQVRAKLS   GFGGPTEVTCGGNALKFYAS+RLN++R
Sbjct: 241  ILIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKR 283


>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  437 bits (1125), Expect = e-120
 Identities = 222/282 (78%), Positives = 248/282 (87%)
 Frame = +2

Query: 179  MARLIKSVSFLKNTLLTPQGLREGLVGTSSHIRCFSSKGKRKSKSELSDSGEENLSKKDL 358
            MARL+++ S L+  L+ P+G+R G++GTS+ I  F++KGKRKSKS+ S+SGEEN+SKK+L
Sbjct: 1    MARLLRNASSLRRALVAPEGIRRGVLGTSTQICNFATKGKRKSKSDGSESGEENMSKKEL 60

Query: 359  ALKQALDQITTTFGKGSIMWLGRSVAPKEVPVVSTGSFALDIALGIGGLPKGRVVEIYGP 538
            AL+QALDQIT+ FGKG+IMW GRS APK VPVVSTGSFALDIALG GG PKGRVVEI+GP
Sbjct: 61   ALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVEIFGP 120

Query: 539  EASGKTTLALHVIAEAQKQGGYCVFIDAEHALDPVLAKSIGVNTENLLLSQPDCGEQALS 718
            EASGKTTLALHVIAEAQKQGGYCVF+DAEHALD  LAK+IGVNTENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS 180

Query: 719  LVDTIIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 898
            LVDT+IRSG            LVPK ELDGEMGDAHMAMQARLMSQALRKLSHSLS SQT
Sbjct: 181  LVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSQSQT 240

Query: 899  ILIFINQVRAKLSITGFGGPTEVTCGGNALKFYASMRLNVRR 1024
            IL+FINQVRAKLS  GFGGPTEVTCGGNALKFYAS+RLN+RR
Sbjct: 241  ILVFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIRR 282


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Glycine max]
          Length = 459

 Score =  430 bits (1105), Expect = e-118
 Identities = 222/284 (78%), Positives = 249/284 (87%), Gaps = 1/284 (0%)
 Frame = +2

Query: 176  NMARLIKSVSFLKNTLLTPQGLREGLVGTSSHIRCFSSKGKRKSKSELSDSGEENLSKKD 355
            +MARL+++ S L  +L  P+  + G++GTS  I  FSSKG+R+SKS+ SDSGEEN+SKK+
Sbjct: 26   SMARLLRNTSLLTRSLFFPKVFKLGMIGTSQ-ILSFSSKGRRRSKSDGSDSGEENMSKKE 84

Query: 356  LALKQALDQITTTFGKGSIMWLGRSVAPKEVPVVSTGSFALDIALGIGGLPKGRVVEIYG 535
            LAL+QALDQIT+ FGKGSIMWLGRSV+PK VPVVSTGSFALD+ALGIGGLPKGRVVEIYG
Sbjct: 85   LALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEIYG 144

Query: 536  PEASGKTTLALHVIAEAQKQGGYCVFIDAEHALDPVLAKSIGVNTENLLLSQPDCGEQAL 715
            PEASGKTTLALHVIAEAQKQGGYCVF+DAEHALD  LA+SIGVNT NLLLSQPDCGEQAL
Sbjct: 145  PEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQAL 204

Query: 716  SLVDTIIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 895
            SLVDT+IRSG            LVPKGELDGEMGDAHMAMQARLMSQALRKLSH+LSLSQ
Sbjct: 205  SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQ 264

Query: 896  TILIFINQVRAKLS-ITGFGGPTEVTCGGNALKFYASMRLNVRR 1024
            TILIFINQVR+K+S   GF GPTEVTCGGNALKFYAS+RLN++R
Sbjct: 265  TILIFINQVRSKISTFGGFSGPTEVTCGGNALKFYASVRLNIKR 308


>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
            gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
            repair protein recA homolog 3, mitochondrial; AltName:
            Full=Recombinase A homolog 3; Flags: Precursor
            gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
            thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
            recA-like 3 [Arabidopsis thaliana]
          Length = 430

 Score =  415 bits (1066), Expect = e-113
 Identities = 212/283 (74%), Positives = 248/283 (87%), Gaps = 1/283 (0%)
 Frame = +2

Query: 179  MARLIKSVSFLKNTLLTPQGLREGLVGTSSHIRCFSSKGKRKSKSELSDSGEENLSKKDL 358
            MAR++++V  L+++L + + LR  +VGTS  +R F++K K+KSKS+ + S EE +SKK++
Sbjct: 1    MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEI 60

Query: 359  ALKQALDQITTTFGKGSIMWLGRSVAPKEVPVVSTGSFALDIALGIGGLPKGRVVEIYGP 538
            AL+QALDQIT++FGKGSIM+LGR+V+P+ VPV STGSFALD+ALG+GGLPKGRVVEIYGP
Sbjct: 61   ALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGP 120

Query: 539  EASGKTTLALHVIAEAQKQGGYCVFIDAEHALDPVLAKSIGVNTENLLLSQPDCGEQALS 718
            EASGKTTLALHVIAEAQKQGG CVF+DAEHALD  LAK+IGVNTENLLLSQPDCGEQALS
Sbjct: 121  EASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS 180

Query: 719  LVDTIIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 898
            LVDT+IRSG            LVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT
Sbjct: 181  LVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 899  ILIFINQVRAKLS-ITGFGGPTEVTCGGNALKFYASMRLNVRR 1024
            +LIFINQVR+KLS   GFGGPTEVTCGGNALKFYASMRLN++R
Sbjct: 241  LLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKR 283


>ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|AES65456.1| RecA [Medicago
            truncatula]
          Length = 424

 Score =  413 bits (1062), Expect = e-113
 Identities = 218/288 (75%), Positives = 245/288 (85%), Gaps = 6/288 (2%)
 Frame = +2

Query: 179  MARLIKSVSFLKNT-----LLTPQGLREGLVGTSSHIRCFSSKGKRKSKSELSDSGEENL 343
            MARL++S  FL  +     L T    + G++GTS  +   ++KGK++SKS+ SDSGEEN+
Sbjct: 1    MARLLRSTFFLNRSFFHHHLPTRFCSKNGVLGTSQVLSFSTNKGKKRSKSDGSDSGEENM 60

Query: 344  SKKDLALKQALDQITTTFGKGSIMWLGRSVAPKEVPVVSTGSFALDIALGIGGLPKGRVV 523
            SKKDLAL+QA+DQIT+TFGKGSIMWLGR+V+PK VPVVSTGSFALDIALGI GLPKGRVV
Sbjct: 61   SKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFALDIALGIFGLPKGRVV 120

Query: 524  EIYGPEASGKTTLALHVIAEAQKQGGYCVFIDAEHALDPVLAKSIGVNTENLLLSQPDCG 703
            EI+GPEASGKTTLALHVIAEAQKQGGYC FIDAEHALD  LA+SIGVNTENLLLSQPDCG
Sbjct: 121  EIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESIGVNTENLLLSQPDCG 180

Query: 704  EQALSLVDTIIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 883
            EQALSLVDT+IRSG            LVPKGELDGEMGDAHMAMQARLMSQALRKL HSL
Sbjct: 181  EQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSL 240

Query: 884  SLSQTILIFINQVRAKLS-ITGFGGPTEVTCGGNALKFYASMRLNVRR 1024
            SLSQ ILIFINQVR+K+S   GFGGPTEVTCGGNALKFY+S+RLN++R
Sbjct: 241  SLSQCILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYSSVRLNIKR 288