BLASTX nr result

ID: Bupleurum21_contig00017272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017272
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40430.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002278060.1| PREDICTED: probable receptor-like protein ki...    77   2e-12
ref|XP_002511899.1| ATP binding protein, putative [Ricinus commu...    62   4e-08
ref|XP_002320815.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|NP_001190642.1| fringe-related protein [Arabidopsis thaliana...    59   5e-07

>emb|CBI40430.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -1

Query: 293 GVEIMKINNAAGSLDGLVSAESIMKCRSHRDIGVWASLVAAMILFLVAPVVVQKRRSAIK 114
           GVEIMK+NN+ GSLDG VS E ++K     +IGV  +L A++ L L A +++ +RR  +K
Sbjct: 355 GVEIMKLNNSMGSLDGEVSVEQVLKNWPRGNIGVSVALFASVCLLLTASLLMHRRRVGVK 414

Query: 113 DAVAWSPIP--INEVDLKHHNRIN 48
           D+VAWSP+P  I++ +LK +N+ +
Sbjct: 415 DSVAWSPLPMDISKGNLKSNNQFS 438


>ref|XP_002278060.1| PREDICTED: probable receptor-like protein kinase At5g24010-like
           [Vitis vinifera]
          Length = 481

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -1

Query: 293 GVEIMKINNAAGSLDGLVSAESIMKCRSHRDIGVWASLVAAMILFLVAPVVVQKRRSAIK 114
           GVEIMK+NN+ GSLDG VS E ++K     +IGV  +L A++ L L A +++ +RR  +K
Sbjct: 391 GVEIMKLNNSMGSLDGEVSVEQVLKNWPRGNIGVSVALFASVCLLLTASLLMHRRRVGVK 450

Query: 113 DAVAWSPIP--INEVDLKHHNRIN 48
           D+VAWSP+P  I++ +LK +N+ +
Sbjct: 451 DSVAWSPLPMDISKGNLKSNNQFS 474


>ref|XP_002511899.1| ATP binding protein, putative [Ricinus communis]
           gi|223549079|gb|EEF50568.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 476

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
 Frame = -1

Query: 293 GVEIMKINNAAGSLDGLVSAESIMKCRSHRDIGVWASLVAAMILFLVAPVVVQKRRSAIK 114
           GVEIMK+NN+ GSLDG + A  +++      IGV   LVA + + L   V++ +R    +
Sbjct: 389 GVEIMKMNNSVGSLDGNMCAGMVLRSWPREHIGVLVPLVAVVCVLLSVYVIMHRRSVDAR 448

Query: 113 DAVAWSPIP--INEVDLKHHN 57
           D++AWS +P   ++V LKH N
Sbjct: 449 DSIAWSKLPTDTSQVMLKHGN 469


>ref|XP_002320815.1| predicted protein [Populus trichocarpa] gi|222861588|gb|EEE99130.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -1

Query: 293 GVEIMKINNAAGSLDGLVSAESIMKCRSHRDIGVWASLVAAMILFLVAPVVVQKRRSAIK 114
           GVEIMK+NN+ GSL G + A  ++K     +IGV    VA + L L   +V+ +R   ++
Sbjct: 388 GVEIMKMNNSMGSLGGKICAGMVLKSWPRGNIGVLVPFVAGLCLLLSLALVMHRRTVGMR 447

Query: 113 DAVAWSPIP--INEVDLKHHN 57
           + V+WS +P  +  VDL H N
Sbjct: 448 NPVSWSKLPTEVPGVDLNHGN 468


>ref|NP_001190642.1| fringe-related protein [Arabidopsis thaliana]
           gi|110737285|dbj|BAF00589.1| hypothetical protein
           [Arabidopsis thaliana] gi|332656452|gb|AEE81852.1|
           fringe-related protein [Arabidopsis thaliana]
          Length = 478

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -1

Query: 293 GVEIMKINNAAGSLDGLVSAESIMK-CRSHRDIGVWASLVAAMILFLVAPVVVQKRRSAI 117
           GVEIMK+NN+ GSLDG VS E I+  C + R++ ++ +++A M +F+   +V Q++R  +
Sbjct: 392 GVEIMKMNNSMGSLDGYVSTEMILSTCPNRRNLSIFIAMLAFMCIFMSFYIVTQRKR--V 449

Query: 116 KDAVAWSPIPINEVD 72
           KD   W+ + ++ ++
Sbjct: 450 KDQYGWTKLSMDVLE 464


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