BLASTX nr result

ID: Bupleurum21_contig00017268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017268
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067012.1| Os12g0559400 [Oryza sativa Japonica Group] g...    60   2e-07
gb|EEE53424.1| hypothetical protein OsJ_36499 [Oryza sativa Japo...    60   2e-07
gb|EEC74499.1| hypothetical protein OsI_09975 [Oryza sativa Indi...    59   4e-07
ref|XP_002444659.1| hypothetical protein SORBIDRAFT_07g025620 [S...    59   5e-07
gb|ABA98919.1| Leucine Rich Repeat family protein [Oryza sativa ...    57   1e-06

>ref|NP_001067012.1| Os12g0559400 [Oryza sativa Japonica Group]
           gi|77556124|gb|ABA98920.1| Leucine Rich Repeat family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113649519|dbj|BAF30031.1| Os12g0559400 [Oryza sativa
           Japonica Group]
          Length = 788

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
 Frame = +2

Query: 17  VVPQWPDRILSLEKFRLLRVLTVSNYKFTVQN--MSRISELTYLKYLSLRGC-ELEELPE 187
           V  +W    +S +K RLLRVL + + K  V+N  + +I EL +L+YLSLRGC  +  LP+
Sbjct: 290 VFGEWRPFFIS-DKMRLLRVLDLEDTK-DVRNHHIKQIGELLHLRYLSLRGCMRIAYLPD 347

Query: 188 SIGNLRNLVYLDIRVKVVIRIP 253
           S+GNLR L  LD+R   ++R+P
Sbjct: 348 SLGNLRQLETLDVRDTFILRLP 369


>gb|EEE53424.1| hypothetical protein OsJ_36499 [Oryza sativa Japonica Group]
          Length = 786

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
 Frame = +2

Query: 17  VVPQWPDRILSLEKFRLLRVLTVSNYKFTVQN--MSRISELTYLKYLSLRGC-ELEELPE 187
           V  +W    +S +K RLLRVL + + K  V+N  + +I EL +L+YLSLRGC  +  LP+
Sbjct: 209 VFGEWRPFFIS-DKMRLLRVLDLEDTK-DVRNHHIKQIGELLHLRYLSLRGCMRIAYLPD 266

Query: 188 SIGNLRNLVYLDIRVKVVIRIP 253
           S+GNLR L  LD+R   ++R+P
Sbjct: 267 SLGNLRQLETLDVRDTFILRLP 288


>gb|EEC74499.1| hypothetical protein OsI_09975 [Oryza sativa Indica Group]
          Length = 328

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +2

Query: 17  VVPQWPDRILSLEKFRLLRVLTVSNYK-FTVQNMSRISELTYLKYLSLRGCEL-EELPES 190
           V  +W    +S +  +LLRVL + N    T  ++ R+  L +LK+LSLRGC++   LP+S
Sbjct: 78  VFGKWESFFIS-DNMKLLRVLDLENASDVTNDDLERVVSLPHLKFLSLRGCKMVSRLPDS 136

Query: 191 IGNLRNLVYLDIRVKVVIRIPNV 259
           +G LR L  LDIR   ++R+P V
Sbjct: 137 LGGLRQLQTLDIRHTSIVRLPTV 159


>ref|XP_002444659.1| hypothetical protein SORBIDRAFT_07g025620 [Sorghum bicolor]
            gi|241941009|gb|EES14154.1| hypothetical protein
            SORBIDRAFT_07g025620 [Sorghum bicolor]
          Length = 1193

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = +2

Query: 17   VVPQWPDRILSLEKFRLLRVLTVSNYKFTVQN-MSRISELTYLKYLSLRGCE-LEELPES 190
            V  +W    LS +K RLLRVL + N K  + + + +I +L +LKYLS+R C+ +  LP+S
Sbjct: 784  VFGKWRPLFLS-DKVRLLRVLDLENTKDLMDHHLMQIGKLLHLKYLSIRECDNIFHLPDS 842

Query: 191  IGNLRNLVYLDIRVKVVIRIPN 256
            +GNL+ L  LDI+   +I++PN
Sbjct: 843  LGNLKQLQTLDIKNTRIIKLPN 864


>gb|ABA98919.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
          Length = 632

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +2

Query: 17  VVPQWPDRILSLEKFRLLRVLTVSNYKFTVQN--MSRISELTYLKYLSLRGC-ELEELPE 187
           V  +W    +S +K RLLRVL + + +  V+N  + +I EL +L+YLSLRGC  +  LP+
Sbjct: 296 VFGEWRPFFIS-DKMRLLRVLDLEDTE-GVRNHHIKQIGELLHLRYLSLRGCMHIAYLPD 353

Query: 188 SIGNLRNLVYLDIRVKVVIR 247
           S+GNLR L  LD+R  V+++
Sbjct: 354 SLGNLRQLETLDVRASVIVK 373


Top