BLASTX nr result

ID: Bupleurum21_contig00017255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017255
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521767.1| leucine-rich repeat-containing protein, puta...   103   2e-20
ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus tric...    99   6e-19
ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vi...    97   2e-18
gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. ...    97   3e-18
ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18

>ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223538980|gb|EEF40577.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  103 bits (258), Expect = 2e-20
 Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 6/205 (2%)
 Frame = +3

Query: 9   KNVNLHGSFQQRFGSLRWLRWDCCLLMELPSGFRPGRLVVLELPDSKIKK-WEXXXXXXX 185
           + ++L G F+  +  L+ L W+   L  LPS F P ++++LE+P S IK+ W        
Sbjct: 350 RKIHLSGDFEFLYYKLKCLCWEGYPLKYLPSNFNPKKIIMLEMPQSSIKRLWGGRLELKE 409

Query: 186 XXXXXMSNSKNLTTMPDFTKLPNLETLTLNGCESLEKVDIPINSLTKIVSFHLRGCVKLR 365
                +S+S+ LT  PDFT +PNLETL L GC SL KV   I  L K++  +L+ C  LR
Sbjct: 410 LQFIDLSHSQYLTETPDFTGVPNLETLILEGCTSLSKVHPSIGVLKKLILLNLKDCNCLR 469

Query: 366 SIHVISTSSLGVMEVLDVSRCEKLEKLPHQLCEITSLRKIYL-GTRHEYLEAPFKHLK-- 536
           S+    +  L  + VL +S C KLEK P  + ++  L K+ L GT    +   F +L   
Sbjct: 470 SLP--GSIGLESLNVLVLSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANLTGL 527

Query: 537 --LSENNFTALPSFYSHFLKLEHLE 605
             LS  N   L    S+   L++L+
Sbjct: 528 TFLSLRNCKNLEKLPSNINSLKYLK 552


>ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1121

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
 Frame = +3

Query: 6    LKNVNLHGSFQQRFGSLRWLRWDCCLLMELPSGFRPGRLVVLELPDSKIKK-WEXXXXXX 182
            L+N+NL    +     LR+L W       LPS F+P +LV L +  S IK+ WE      
Sbjct: 567  LQNINLSQEIKYLSNELRYLEWCRYPFKSLPSTFQPDKLVELHMRHSSIKQLWEGVRPLK 626

Query: 183  XXXXXXMSNSKNLTTMPDFTKLPNLETLTLNGCESLEKVDIPINSLTKIVSFHLRGCVKL 362
                  + +S+NL   PDF ++PNLE L L GC  L K+D  I  L  +V  +L+ CVKL
Sbjct: 627  LLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKL 686

Query: 363  RSIHVISTSSLGVMEVLDVSRCEKLEKLPHQLCEITSLRKIYLG 494
              +   +   L  + +L++  C KLEKLP  L  + +L ++ +G
Sbjct: 687  ACLPT-NICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVG 729


>ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
 Frame = +3

Query: 12   NVNLHGSFQQRFGSLRWLRWDCCLLMELPSGFRPGRLVVLELPDSKIKK-WEXXXXXXXX 188
            NV ++G+ +    +LR L W    L  LPS F P +LV L +  S++++ W+        
Sbjct: 571  NVKMNGNLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSSRLEQLWKGDKSFEKL 630

Query: 189  XXXXMSNSKNLTTMPDFTKLPNLETLTLNGCESLEKVDIPINSLTKIVSFHLRGCVKLRS 368
                +S+S+ LT  PDF+  PNLE L L GC S+ KV   I +L K++  +L GC  L+S
Sbjct: 631  KFIKLSHSQYLTRTPDFSGAPNLERLILEGCTSMVKVHPSIGALQKLIFLNLEGCKNLKS 690

Query: 369  IHVISTSSLGVMEVLDVSRCEKLEKLPHQLCEITSLRKIYL 491
                S+  +  +++L +S C KL+K P  L  + SLR++ L
Sbjct: 691  F--ASSIHMNSLQILTLSGCSKLKKFPEMLENMKSLRQLLL 729


>gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 71/191 (37%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
 Frame = +3

Query: 54   LRWLRWDCCLLMELPSGFRPGRLVVLELPDSKIKK-WEXXXXXXXXXXXXMSNSKNLTTM 230
            LR L W+   +  LP  F P  L+ L +P+S +KK W+            +S S  LT +
Sbjct: 669  LRLLHWEYYPISSLPQCFDPKNLIELNMPNSCVKKLWKGKKSLENLKKMRLSYSSQLTKL 728

Query: 231  PDFTKLPNLETLTLNGCESLEKVDIPINSLTKIVSFHLRGCVKLRSIHVISTSSLGVMEV 410
            P  T   NLE L L GC+SLE +   I  L K+VS +L+ C  L S  V STS L  +EV
Sbjct: 729  PRLTSAQNLELLDLEGCKSLESISHSICYLKKLVSLNLKDCSNLES--VPSTSDLESLEV 786

Query: 411  LDVSRCEKLEKLPHQLCEIT-SLRKIYL-GTRHEYLEAPFKHL----KLSENNFTALPSF 572
            L++S C KLE  P    EI+ +++++YL GT    + +  K+L    KL   N   L   
Sbjct: 787  LNLSGCSKLENFP----EISPNVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVIL 842

Query: 573  YSHFLKLEHLE 605
             +   KL+HLE
Sbjct: 843  PTSMCKLKHLE 853


>ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|222862158|gb|EEE99664.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
 Frame = +3

Query: 6   LKNVNLHGSFQQRFGSLRWLRWDCCLLMELPSGFRPGRLVVLELPDSKIKK-WEXXXXXX 182
           +K  NL GS+      L WL W  C L  LPS F    LV+L++ +S ++K W+      
Sbjct: 9   IKGANLVGSYSLLPKELIWLCWFGCPLKSLPSDFHLNDLVILDMQESNVRKLWKGTKILN 68

Query: 183 XXXXXXMSNSKNLTTMPDFTKLPNLETLTLNGCESLEKVDIPINSLTKIVSFHLRGCVKL 362
                 +S SK L   P+F +L  LE L L GC SL KV   I +L  +V  +L  C  L
Sbjct: 69  KLKILNLSYSKYLDETPNFRELSCLERLILTGCTSLVKVHQSIGNLKSLVLLNLHYCDSL 128

Query: 363 RSIHVISTSSLGVMEVLDVSRCEKLEKLPHQLCEITSLRKIYL-GTRHEYLEAPFKHLK 536
           +++   S  +L  ++ L+V++C +LEKLP  L +I SL +++  GT  + L    ++LK
Sbjct: 129 KTLPE-SMGNLKSLQTLNVTQCRQLEKLPESLGDIESLTELFTKGTAIKQLPTSARYLK 186


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