BLASTX nr result
ID: Bupleurum21_contig00017241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00017241
(1395 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 783 0.0
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 782 0.0
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 782 0.0
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 779 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 779 0.0
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 783 bits (2022), Expect = 0.0
Identities = 380/462 (82%), Positives = 425/462 (91%)
Frame = -2
Query: 1388 GARQQREAIKRAPKKQLEFVFEALDTLGSTKWRVHKTVLDVVDKIWNSGGNLADLVDRND 1209
GARQQREA+KRA + QL+ VFEALDTLGSTKWR++K VL V+D+IW GG LADLVDR+D
Sbjct: 479 GARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDD 538
Query: 1208 LPLPEKPDTEDEAVLTXXXXXXXXXXKENRERHSRRCDIELKLSVAHRLKDEEGFFYPHN 1029
PLPE+PDTEDEA+ T KENRERHS+RCDIELKL+VA ++KDEEGFFYPHN
Sbjct: 539 APLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHN 598
Query: 1028 LDFRGRAYPIHPHLNHLGSDICRGILEFAQGRPLGKSGLKWLKIHLANLYAGGVDKLSYD 849
+DFRGRAYP+HPHLNHLGSDICRG+L FA+GRPLG+SGL+WLKIHLANL+AGGV+KLS +
Sbjct: 599 VDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLE 658
Query: 848 GRIAFTESHLDDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSSSPETTISNIP 669
GRIAFTE+H+DDIFDSAD+PLEGRRWWLNAEDPFQCLAVCINLSEA+RSSSPET+IS+IP
Sbjct: 659 GRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIP 718
Query: 668 VHQDGSCNGLQHYAALGRDKLGADAVNLVGGGEPADVYSGIATRVLNIVKDDAKKDPATF 489
VHQDGSCNGLQHYAALGRD+LGA AVNLV G +PADVYSGIA RVL+I+K DA++DPA F
Sbjct: 719 VHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEF 778
Query: 488 SDALCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIADDAELFRAACY 309
DA+ AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG+IADD+ELF AACY
Sbjct: 779 PDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACY 838
Query: 308 AAKVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKSERHFVK 129
AAKVTLTALGEMFEAARSIM+WLG+CAKIIASEN+PVRW TPLGLPVVQPYRK RH +K
Sbjct: 839 AAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIK 898
Query: 128 TSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 3
TSLQILTLQ+ETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV
Sbjct: 899 TSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 940
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 782 bits (2020), Expect = 0.0
Identities = 379/462 (82%), Positives = 424/462 (91%)
Frame = -2
Query: 1388 GARQQREAIKRAPKKQLEFVFEALDTLGSTKWRVHKTVLDVVDKIWNSGGNLADLVDRND 1209
GARQQREA+KRA + QL+ VFEALDTLG+TKWR++K VL VVD+IW GG LADLVDR+D
Sbjct: 478 GARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDD 537
Query: 1208 LPLPEKPDTEDEAVLTXXXXXXXXXXKENRERHSRRCDIELKLSVAHRLKDEEGFFYPHN 1029
PLPE+PDTEDEA+ T KENRERHS+RCDIELKL+VA ++KDEE FFYPHN
Sbjct: 538 APLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHN 597
Query: 1028 LDFRGRAYPIHPHLNHLGSDICRGILEFAQGRPLGKSGLKWLKIHLANLYAGGVDKLSYD 849
+DFRGRAYP+HPHLNHLGSDICRG+LEFA+GRPLG+SGL+WLKIHLANL+AGGV+KLS +
Sbjct: 598 VDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLE 657
Query: 848 GRIAFTESHLDDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSSSPETTISNIP 669
GRI FTE+H+DDIFDS+D+PLEGRRWWLNAEDPFQCLAVCINLSEA+RSSSPET++S+IP
Sbjct: 658 GRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIP 717
Query: 668 VHQDGSCNGLQHYAALGRDKLGADAVNLVGGGEPADVYSGIATRVLNIVKDDAKKDPATF 489
VHQDGSCNGLQHYAALGRDKLGA AVNLV G +PADVYSGIA RVL+I+K DA++DPA F
Sbjct: 718 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEF 777
Query: 488 SDALCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIADDAELFRAACY 309
DA+ AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG+IADD+ELF AACY
Sbjct: 778 PDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACY 837
Query: 308 AAKVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKSERHFVK 129
AAKVTLTALGEMFEAARSIM+WLG+CAKIIASEN+PVRW TPLGLPVVQPYRK RH +K
Sbjct: 838 AAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIK 897
Query: 128 TSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 3
TSLQILTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV
Sbjct: 898 TSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 939
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 589
Score = 782 bits (2019), Expect = 0.0
Identities = 377/462 (81%), Positives = 423/462 (91%)
Frame = -2
Query: 1388 GARQQREAIKRAPKKQLEFVFEALDTLGSTKWRVHKTVLDVVDKIWNSGGNLADLVDRND 1209
GARQQREA+K P++QL+ VFEALDTLGSTKWR++K +L VVD+IWNSGG L DLVDRND
Sbjct: 47 GARQQREAVKITPREQLQPVFEALDTLGSTKWRINKRILGVVDRIWNSGGRLGDLVDRND 106
Query: 1208 LPLPEKPDTEDEAVLTXXXXXXXXXXKENRERHSRRCDIELKLSVAHRLKDEEGFFYPHN 1029
+PLPEKP+TEDEA++ KENRERHS+RCD ELKL+VA ++KDEEGF+YPHN
Sbjct: 107 VPLPEKPETEDEALVRKWKWKLRAAKKENRERHSQRCDTELKLAVARKMKDEEGFYYPHN 166
Query: 1028 LDFRGRAYPIHPHLNHLGSDICRGILEFAQGRPLGKSGLKWLKIHLANLYAGGVDKLSYD 849
LDFRGRAYP+HP+LNHLGSD+CRGILEFA+GRPLGKSGL+WLKIHLANL+AGGVDKLSYD
Sbjct: 167 LDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKLSYD 226
Query: 848 GRIAFTESHLDDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSSSPETTISNIP 669
GRIAFTE+HLDDIFDSADRPLEG+RWWLNAEDPFQCLAVCI+L+EALRSSSPET IS++P
Sbjct: 227 GRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEALRSSSPETFISHVP 286
Query: 668 VHQDGSCNGLQHYAALGRDKLGADAVNLVGGGEPADVYSGIATRVLNIVKDDAKKDPATF 489
+HQDGSCNGLQHYAALGRDKLGA AVNLV G +PADVYSGIA RVL+I++ DA+KDP F
Sbjct: 287 IHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVLDIMRKDAQKDPKVF 346
Query: 488 SDALCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIADDAELFRAACY 309
DAL A+ L++QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IADD E+F A+CY
Sbjct: 347 PDALHAKILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADDTEIFVASCY 406
Query: 308 AAKVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKSERHFVK 129
AAKVTLTALGEMFEAARSIMSWLG+CAKIIASEN+PVRW TPLGLPVVQPYR RH +K
Sbjct: 407 AAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQPYRNFGRHLIK 466
Query: 128 TSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 3
TSLQ+LTLQ+ETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV
Sbjct: 467 TSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 508
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 779 bits (2012), Expect = 0.0
Identities = 377/462 (81%), Positives = 423/462 (91%)
Frame = -2
Query: 1388 GARQQREAIKRAPKKQLEFVFEALDTLGSTKWRVHKTVLDVVDKIWNSGGNLADLVDRND 1209
GARQQREA+KRA + QL+ VFEALDTLG+TKWR++K VL VVD+IW GG LADLVDR+D
Sbjct: 478 GARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDD 537
Query: 1208 LPLPEKPDTEDEAVLTXXXXXXXXXXKENRERHSRRCDIELKLSVAHRLKDEEGFFYPHN 1029
PLPE+PDTEDEA+L KENRERHS+RCDIELKL+VA ++KDEE FFYPHN
Sbjct: 538 APLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHN 597
Query: 1028 LDFRGRAYPIHPHLNHLGSDICRGILEFAQGRPLGKSGLKWLKIHLANLYAGGVDKLSYD 849
+DFRGRAYP+HPHLNHLGSDICRG+LEFA+GRPLG+SGL+WLKIHLANL+AGGV+KLS +
Sbjct: 598 VDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLE 657
Query: 848 GRIAFTESHLDDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSSSPETTISNIP 669
GRI FTE+H+DDIFDS+D+PLEGRRWWLNAEDPFQCLAVCINLSEA+RSSSPET++S+IP
Sbjct: 658 GRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIP 717
Query: 668 VHQDGSCNGLQHYAALGRDKLGADAVNLVGGGEPADVYSGIATRVLNIVKDDAKKDPATF 489
VHQDGSCNGLQHYAALGRDKLGA AVNLV G +PA+ YSGIA RVL+I+K DA++DPA F
Sbjct: 718 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEF 777
Query: 488 SDALCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIADDAELFRAACY 309
DA+ AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG+IADD+ELF AACY
Sbjct: 778 PDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACY 837
Query: 308 AAKVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKSERHFVK 129
AAKVTLTALGEMFEAARSIM+WLG+CAKIIASEN+PVRW TPLGLPVVQPYRK RH +K
Sbjct: 838 AAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIK 897
Query: 128 TSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 3
TSLQILTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV
Sbjct: 898 TSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAV 939
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 779 bits (2011), Expect = 0.0
Identities = 380/462 (82%), Positives = 418/462 (90%)
Frame = -2
Query: 1388 GARQQREAIKRAPKKQLEFVFEALDTLGSTKWRVHKTVLDVVDKIWNSGGNLADLVDRND 1209
GARQQREA+KRAP+ QLE VFEAL+TLG+TKWR++K + DVVD+IW GG LADLVDRND
Sbjct: 493 GARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRND 552
Query: 1208 LPLPEKPDTEDEAVLTXXXXXXXXXXKENRERHSRRCDIELKLSVAHRLKDEEGFFYPHN 1029
+PLPEKPDTEDEA L K N ERHS+RCDIELKL+VA ++KDE+GFFYPHN
Sbjct: 553 VPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHN 612
Query: 1028 LDFRGRAYPIHPHLNHLGSDICRGILEFAQGRPLGKSGLKWLKIHLANLYAGGVDKLSYD 849
LDFRGRAYP+HP+LNHLGSD+CRGILEFA+GRPLG SGL WLKIHLANL+AGGVDKLS++
Sbjct: 613 LDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHE 672
Query: 848 GRIAFTESHLDDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSSSPETTISNIP 669
GRI FTE+HLDDIFDSADRPLEG+RWWLNAEDPFQ LA CINLSEALRSSSPETTIS+IP
Sbjct: 673 GRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIP 732
Query: 668 VHQDGSCNGLQHYAALGRDKLGADAVNLVGGGEPADVYSGIATRVLNIVKDDAKKDPATF 489
VHQDGSCNGLQHYAALGRD+LGA AVNLV G +PADVYSGIA RVL+I+K DA+KDPA F
Sbjct: 733 VHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIF 792
Query: 488 SDALCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIADDAELFRAACY 309
DAL AR L+NQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER +IADD ELF AACY
Sbjct: 793 PDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACY 852
Query: 308 AAKVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKSERHFVK 129
AAK+TLTALGEMF+AARSIMSWLGDCAKIIASENQPVRW TPLGLPVVQPYRK RH +K
Sbjct: 853 AAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIK 912
Query: 128 TSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 3
TSLQ+LTLQRETE +MVKRQRTAFPPNFVHSLDGSHMMMTA+
Sbjct: 913 TSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAI 954