BLASTX nr result

ID: Bupleurum21_contig00017232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017232
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFR78197.1| transcription factor bHLH [Vitis vinifera] gi|404...   221   5e-56
gb|AFH68208.1| transcription factor bHLH [Vitis amurensis] gi|38...   221   5e-56
emb|CBI19312.3| unnamed protein product [Vitis vinifera]              221   5e-56
ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Viti...   221   5e-56
ref|XP_002302353.1| predicted protein [Populus trichocarpa] gi|1...   208   3e-52

>gb|AFR78197.1| transcription factor bHLH [Vitis vinifera]
           gi|404551202|gb|AFR78198.1| transcription factor bHLH
           [Vitis vinifera]
          Length = 334

 Score =  221 bits (563), Expect = 5e-56
 Identities = 111/138 (80%), Positives = 122/138 (88%)
 Frame = -1

Query: 414 MAEXXXXXRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLEKISTLQEENESDNHE 235
           MAE     RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLE+I+ LQEENE D+ +
Sbjct: 169 MAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQ 228

Query: 234 LSLQSIFKDVKPNEVLVRNSPKFNVERRKMDTRIEMCCANKPGLLLSTVTTLEALGLEIQ 55
           L+L  IFKD+KPNE++VRNSPKF+VERR MDTRIE+CCA KPGLLLSTV TLEALGLEIQ
Sbjct: 229 LNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQ 288

Query: 54  HCVISCFNEFGMHASCSE 1
            CVISCFN+F M ASCSE
Sbjct: 289 QCVISCFNDFSMQASCSE 306


>gb|AFH68208.1| transcription factor bHLH [Vitis amurensis]
           gi|384157483|gb|AFH68209.1| transcription factor bHLH
           [Vitis amurensis]
          Length = 334

 Score =  221 bits (563), Expect = 5e-56
 Identities = 111/138 (80%), Positives = 122/138 (88%)
 Frame = -1

Query: 414 MAEXXXXXRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLEKISTLQEENESDNHE 235
           MAE     RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLE+I+ LQEENE D+ +
Sbjct: 169 MAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQ 228

Query: 234 LSLQSIFKDVKPNEVLVRNSPKFNVERRKMDTRIEMCCANKPGLLLSTVTTLEALGLEIQ 55
           L+L  IFKD+KPNE++VRNSPKF+VERR MDTRIE+CCA KPGLLLSTV TLEALGLEIQ
Sbjct: 229 LNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQ 288

Query: 54  HCVISCFNEFGMHASCSE 1
            CVISCFN+F M ASCSE
Sbjct: 289 QCVISCFNDFSMQASCSE 306


>emb|CBI19312.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  221 bits (563), Expect = 5e-56
 Identities = 111/138 (80%), Positives = 122/138 (88%)
 Frame = -1

Query: 414 MAEXXXXXRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLEKISTLQEENESDNHE 235
           MAE     RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLE+I+ LQEENE D+ +
Sbjct: 130 MAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQ 189

Query: 234 LSLQSIFKDVKPNEVLVRNSPKFNVERRKMDTRIEMCCANKPGLLLSTVTTLEALGLEIQ 55
           L+L  IFKD+KPNE++VRNSPKF+VERR MDTRIE+CCA KPGLLLSTV TLEALGLEIQ
Sbjct: 190 LNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQ 249

Query: 54  HCVISCFNEFGMHASCSE 1
            CVISCFN+F M ASCSE
Sbjct: 250 QCVISCFNDFSMQASCSE 267


>ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Vitis vinifera]
          Length = 334

 Score =  221 bits (563), Expect = 5e-56
 Identities = 111/138 (80%), Positives = 122/138 (88%)
 Frame = -1

Query: 414 MAEXXXXXRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLEKISTLQEENESDNHE 235
           MAE     RLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLE+I+ LQEENE D+ +
Sbjct: 169 MAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLERINNLQEENEVDSSQ 228

Query: 234 LSLQSIFKDVKPNEVLVRNSPKFNVERRKMDTRIEMCCANKPGLLLSTVTTLEALGLEIQ 55
           L+L  IFKD+KPNE++VRNSPKF+VERR MDTRIE+CCA KPGLLLSTV TLEALGLEIQ
Sbjct: 229 LNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQ 288

Query: 54  HCVISCFNEFGMHASCSE 1
            CVISCFN+F M ASCSE
Sbjct: 289 QCVISCFNDFSMQASCSE 306


>ref|XP_002302353.1| predicted protein [Populus trichocarpa] gi|118482108|gb|ABK92985.1|
           unknown [Populus trichocarpa]
           gi|222844079|gb|EEE81626.1| predicted protein [Populus
           trichocarpa]
          Length = 347

 Score =  208 bits (530), Expect = 3e-52
 Identities = 105/138 (76%), Positives = 118/138 (85%)
 Frame = -1

Query: 414 MAEXXXXXRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLEKISTLQEENESDNHE 235
           MAE     RLNDRLSMLRS+VPKISKMDRTSILGDTIDYMKELLE+I++LQ+E E  + E
Sbjct: 182 MAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERINSLQQEIEVGSEE 241

Query: 234 LSLQSIFKDVKPNEVLVRNSPKFNVERRKMDTRIEMCCANKPGLLLSTVTTLEALGLEIQ 55
           L + SIFKD KPNE++VRNSPKF VERR  DTRI++CCA KPGLLLS+VTTLE LGLEIQ
Sbjct: 242 LKMISIFKDTKPNEIVVRNSPKFEVERRNEDTRIDICCATKPGLLLSSVTTLETLGLEIQ 301

Query: 54  HCVISCFNEFGMHASCSE 1
            CVISCFN+F M ASCSE
Sbjct: 302 QCVISCFNDFTMQASCSE 319


Top