BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017229
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            219   1e-78
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   184   2e-68
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         173   1e-65
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           163   1e-62
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]   157   4e-57

>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  219 bits (559), Expect(2) = 1e-78
 Identities = 108/123 (87%), Positives = 114/123 (92%)
 Frame = -3

Query: 538 YKRTSADPCVYFRKFPGGNFIILLLYVDDMLIVGQDVKMINELKKDLSKSFDMKNLGPAK 359
           YKRT+ADPCVYFRKF  GNFIIL LYVDDMLIVGQDV+MI  LK+DLSKSFDMK+LGPAK
Sbjct: 343 YKRTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAK 402

Query: 358 QILGMEIARDRKAGKLWLSQEKYIERVLERFNMKHAKPVNTPLATHFKLSKKACPTTEKE 179
           QILGMEIARDRKAGKLWLSQE YIERVLERFNMK+AKPVNTPLA HFKLSK+ CPTTEKE
Sbjct: 403 QILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKE 462

Query: 178 KAS 170
           K S
Sbjct: 463 KES 465



 Score = 99.4 bits (246), Expect(2) = 1e-78
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -2

Query: 155 YSSAVGSLMYAMVCTRPDIAHSVGVVSRYLSNPGKVHWDAVKWIFRYLRGT 3
           YSS VGSLMYAMVCTRPDIAH+VG+VSRYL+NP KVHW+AVKWI RYLRGT
Sbjct: 471 YSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGT 521


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  184 bits (467), Expect(2) = 2e-68
 Identities = 90/123 (73%), Positives = 106/123 (86%)
 Frame = -3

Query: 538  YKRTSADPCVYFRKFPGGNFIILLLYVDDMLIVGQDVKMINELKKDLSKSFDMKNLGPAK 359
            Y +T +DPCVYF++F   NFIILLLYVDDMLIVG+D  +I +LK DLSKSFDMK+LGPA+
Sbjct: 983  YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQ 1042

Query: 358  QILGMEIARDRKAGKLWLSQEKYIERVLERFNMKHAKPVNTPLATHFKLSKKACPTTEKE 179
            QILGM+I R+R + KLWLSQEKYIERVLERFNMK+AKPV+TPLA H KLSKK CPTT +E
Sbjct: 1043 QILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEE 1102

Query: 178  KAS 170
            K +
Sbjct: 1103 KGN 1105



 Score =  100 bits (248), Expect(2) = 2e-68
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = -2

Query: 155  YSSAVGSLMYAMVCTRPDIAHSVGVVSRYLSNPGKVHWDAVKWIFRYLRGT 3
            YSSAVGSLMYAMVCTRPDIAH+VGVVSR+L NPGK HW+AVKWI RYLRGT
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGT 1161


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  173 bits (438), Expect(2) = 1e-65
 Identities = 82/122 (67%), Positives = 102/122 (83%)
 Frame = -3

Query: 541  GYKRTSADPCVYFRKFPGGNFIILLLYVDDMLIVGQDVKMINELKKDLSKSFDMKNLGPA 362
            GYK+TS+D CV+  ++   +F+ILLLYVDDMLIVG++   I ELK++LSKSF MK++GPA
Sbjct: 980  GYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPA 1039

Query: 361  KQILGMEIARDRKAGKLWLSQEKYIERVLERFNMKHAKPVNTPLATHFKLSKKACPTTEK 182
            KQILGM+I RDR+  KLWLSQEKYIE+VLERF+M  AKPV+TPL  HFKL KK CP++EK
Sbjct: 1040 KQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEK 1099

Query: 181  EK 176
            EK
Sbjct: 1100 EK 1101



 Score =  102 bits (253), Expect(2) = 1e-65
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = -2

Query: 155  YSSAVGSLMYAMVCTRPDIAHSVGVVSRYLSNPGKVHWDAVKWIFRYLRGT 3
            YSSAVGSLMYAMVCTRPDIAH+VGVVSR+LSNPG+ HWDAVKWI RYLRGT
Sbjct: 1109 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGT 1159


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  163 bits (413), Expect(2) = 1e-62
 Identities = 80/122 (65%), Positives = 99/122 (81%)
 Frame = -3

Query: 541  GYKRTSADPCVYFRKFPGGNFIILLLYVDDMLIVGQDVKMINELKKDLSKSFDMKNLGPA 362
            GYK+T++D CV+ +KF   +FIILLLYVDDMLIVG++V  IN LK+ LSK F MK+LGPA
Sbjct: 983  GYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPA 1042

Query: 361  KQILGMEIARDRKAGKLWLSQEKYIERVLERFNMKHAKPVNTPLATHFKLSKKACPTTEK 182
            KQILGM I RDR+A KLWLSQEKYIE+VL+RFNM+  K V+ PLA HF+LS K  P+T+ 
Sbjct: 1043 KQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDD 1102

Query: 181  EK 176
            E+
Sbjct: 1103 ER 1104



 Score =  102 bits (253), Expect(2) = 1e-62
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = -2

Query: 155  YSSAVGSLMYAMVCTRPDIAHSVGVVSRYLSNPGKVHWDAVKWIFRYLRGT 3
            Y+SAVGSLMYAMVCTRPDIAH+VGVVSR+LSNPGK HWDAVKWI RYLRGT
Sbjct: 1112 YASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGT 1162


>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score =  157 bits (397), Expect(2) = 4e-57
 Identities = 75/122 (61%), Positives = 101/122 (82%)
 Frame = -3

Query: 541 GYKRTSADPCVYFRKFPGGNFIILLLYVDDMLIVGQDVKMINELKKDLSKSFDMKNLGPA 362
           GYK+T+++ CV+  KF   +F+ILLLYVDD+LIVG++V  I++LKK LSKSF MK+LGP 
Sbjct: 461 GYKKTTSNHCVFVHKFSDDDFVILLLYVDDILIVGRNVSRIDKLKKQLSKSFSMKDLGPV 520

Query: 361 KQILGMEIARDRKAGKLWLSQEKYIERVLERFNMKHAKPVNTPLATHFKLSKKACPTTEK 182
           K+ILG+ I RDR + KL++SQE+YIE+VLERFNM  AK VN+PLA+HFKLS++  P+ +K
Sbjct: 521 KKILGIRIERDRASKKLYMSQEQYIEKVLERFNMSKAKVVNSPLASHFKLSRRHSPSIDK 580

Query: 181 EK 176
           EK
Sbjct: 581 EK 582



 Score = 89.7 bits (221), Expect(2) = 4e-57
 Identities = 39/51 (76%), Positives = 47/51 (92%)
 Frame = -2

Query: 155 YSSAVGSLMYAMVCTRPDIAHSVGVVSRYLSNPGKVHWDAVKWIFRYLRGT 3
           Y+SAVGSLM  MVCTRPDIA+ +GVVSR+LSNPG++HW+AVKWI RYL+GT
Sbjct: 590 YASAVGSLMNPMVCTRPDIAYVIGVVSRFLSNPGRLHWEAVKWIMRYLQGT 640