BLASTX nr result

ID: Bupleurum21_contig00017210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017210
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...    95   7e-18
ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40...    91   7e-17
ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243...    88   8e-16
ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinu...    87   1e-15
ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabid...    86   2e-15

>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = -3

Query: 297 THVLVMVRSVNAQRLVMIVALFFSFLAVNKVVFLDNWKTGYGIHGYWPSSWN 142
           THVLV VR+VN QR+ MI+ALF SF AV KVV+LDNWKTGYGIHGYWPSSWN
Sbjct: 293 THVLVKVRNVNIQRVFMIIALFVSFWAVKKVVYLDNWKTGYGIHGYWPSSWN 344


>ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein
           S27a-like [Cucumis sativus]
          Length = 228

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = -3

Query: 297 THVLVMVRSVNAQRLVMIVALFFSFLAVNKVVFLDNWKTGYGIHGYWPSSWN 142
           THVLV V++VN QR+  I+ALF SF AV KVV+LDNWKTGYGIHGYWPSSWN
Sbjct: 177 THVLVKVKNVNIQRVXRIIALFVSFWAVKKVVYLDNWKTGYGIHGYWPSSWN 228


>ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243455 [Vitis vinifera]
           gi|147770840|emb|CAN74174.1| hypothetical protein
           VITISV_019222 [Vitis vinifera]
          Length = 339

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = -3

Query: 297 THVLVMVRSVNAQRLVMIVALFFSFLAVNKVVFLDNWKTGYGIHGYWPSSWN 142
           THVLV V++V  QR++M+ ALF SFLAV KVV LDNWKTGYGIH +WPSSWN
Sbjct: 288 THVLVRVKNVTVQRVIMLFALFISFLAVKKVVSLDNWKTGYGIHAFWPSSWN 339


>ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinus communis]
           gi|223542371|gb|EEF43913.1| Tumor suppressor candidate,
           putative [Ricinus communis]
          Length = 349

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = -3

Query: 297 THVLVMVRSVNAQRLVMIVALFFSFLAVNKVVFLDNWKTGYGIHGYWPSSW 145
           THVLVMV++V  QR VM+V+L  SF AVNKV++LDNWKTGYG+H +WPSSW
Sbjct: 298 THVLVMVKNVTVQRFVMVVSLVISFWAVNKVIYLDNWKTGYGVHAFWPSSW 348


>ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabidopsis thaliana]
           gi|75213403|sp|Q9SYB5.1|OST3B_ARATH RecName:
           Full=Probable dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 3B; Flags: Precursor
           gi|4508079|gb|AAD21423.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332195765|gb|AEE33886.1| OST3
           and OST6 domain-containing protein [Arabidopsis
           thaliana]
          Length = 346

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = -3

Query: 297 THVLVMVRSVNAQRLVMIVALFFSFLAVNKVVFLDNWKTGYGIHGYWPSSW 145
           T+VLV V+++ AQRL+M++ALF SF AV KVV+LDNWKTGYGIH YWPSSW
Sbjct: 295 TNVLVRVKNITAQRLIMLLALFISFWAVKKVVYLDNWKTGYGIHPYWPSSW 345


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