BLASTX nr result

ID: Bupleurum21_contig00017203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017203
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234563.1| dem protein [Solanum lycopersicum] gi|219041...   177   1e-42
emb|CBI19522.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002327137.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_002284732.1| PREDICTED: protein CYPRO4 [Vitis vinifera]        173   1e-41
emb|CAN82150.1| hypothetical protein VITISV_043502 [Vitis vinifera]   173   1e-41

>ref|NP_001234563.1| dem protein [Solanum lycopersicum] gi|2190419|emb|CAA73973.1| dem
           [Solanum lycopersicum]
          Length = 644

 Score =  177 bits (448), Expect = 1e-42
 Identities = 78/90 (86%), Positives = 86/90 (95%)
 Frame = +1

Query: 1   HTRGLHQFDIETGRVVTEWKFEKDGTDISMRDVTNDSKGAQIDPTGSTFLGLDDNRLCRW 180
           H+RGLHQFDIETG+VV+EWKFEKDGTDI+MRD+TNDSKGAQ+DP+GSTFLGLDDNRLCRW
Sbjct: 339 HSRGLHQFDIETGKVVSEWKFEKDGTDITMRDITNDSKGAQMDPSGSTFLGLDDNRLCRW 398

Query: 181 DMRDRHGMVQTLADANTPVLNWAQGHQFSR 270
           DMRDRHGMVQ L D +TPVLNW QGHQFSR
Sbjct: 399 DMRDRHGMVQNLVDESTPVLNWTQGHQFSR 428


>emb|CBI19522.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  173 bits (438), Expect = 1e-41
 Identities = 76/90 (84%), Positives = 86/90 (95%)
 Frame = +1

Query: 1   HTRGLHQFDIETGRVVTEWKFEKDGTDISMRDVTNDSKGAQIDPTGSTFLGLDDNRLCRW 180
           HTRGLH  DIETG++VTEWKFEKDGTDI+MRD+TNDSKGAQ+DP+GSTFLGLDDNRLCRW
Sbjct: 203 HTRGLHHLDIETGKIVTEWKFEKDGTDITMRDITNDSKGAQMDPSGSTFLGLDDNRLCRW 262

Query: 181 DMRDRHGMVQTLADANTPVLNWAQGHQFSR 270
           DMRDR+GMVQ L+DA+TPVL+W QGHQFSR
Sbjct: 263 DMRDRNGMVQNLSDASTPVLHWTQGHQFSR 292


>ref|XP_002327137.1| predicted protein [Populus trichocarpa] gi|222835452|gb|EEE73887.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  173 bits (438), Expect = 1e-41
 Identities = 75/90 (83%), Positives = 84/90 (93%)
 Frame = +1

Query: 1   HTRGLHQFDIETGRVVTEWKFEKDGTDISMRDVTNDSKGAQIDPTGSTFLGLDDNRLCRW 180
           H+ GLHQ DIETG+++TEWKFEKDGTDI+MRD+ NDSKGAQ+DP+GSTFLGLDDNRLCRW
Sbjct: 342 HSTGLHQLDIETGKIITEWKFEKDGTDITMRDIANDSKGAQLDPSGSTFLGLDDNRLCRW 401

Query: 181 DMRDRHGMVQTLADANTPVLNWAQGHQFSR 270
           DMRDRHG+VQ LA ANTPVLNW QGHQFSR
Sbjct: 402 DMRDRHGIVQNLASANTPVLNWTQGHQFSR 431


>ref|XP_002284732.1| PREDICTED: protein CYPRO4 [Vitis vinifera]
          Length = 632

 Score =  173 bits (438), Expect = 1e-41
 Identities = 76/90 (84%), Positives = 86/90 (95%)
 Frame = +1

Query: 1   HTRGLHQFDIETGRVVTEWKFEKDGTDISMRDVTNDSKGAQIDPTGSTFLGLDDNRLCRW 180
           HTRGLH  DIETG++VTEWKFEKDGTDI+MRD+TNDSKGAQ+DP+GSTFLGLDDNRLCRW
Sbjct: 329 HTRGLHHLDIETGKIVTEWKFEKDGTDITMRDITNDSKGAQMDPSGSTFLGLDDNRLCRW 388

Query: 181 DMRDRHGMVQTLADANTPVLNWAQGHQFSR 270
           DMRDR+GMVQ L+DA+TPVL+W QGHQFSR
Sbjct: 389 DMRDRNGMVQNLSDASTPVLHWTQGHQFSR 418


>emb|CAN82150.1| hypothetical protein VITISV_043502 [Vitis vinifera]
          Length = 632

 Score =  173 bits (438), Expect = 1e-41
 Identities = 76/90 (84%), Positives = 86/90 (95%)
 Frame = +1

Query: 1   HTRGLHQFDIETGRVVTEWKFEKDGTDISMRDVTNDSKGAQIDPTGSTFLGLDDNRLCRW 180
           HTRGLH  DIETG++VTEWKFEKDGTDI+MRD+TNDSKGAQ+DP+GSTFLGLDDNRLCRW
Sbjct: 329 HTRGLHHLDIETGKIVTEWKFEKDGTDITMRDITNDSKGAQMDPSGSTFLGLDDNRLCRW 388

Query: 181 DMRDRHGMVQTLADANTPVLNWAQGHQFSR 270
           DMRDR+GMVQ L+DA+TPVL+W QGHQFSR
Sbjct: 389 DMRDRNGMVQNLSDASTPVLHWTQGHQFSR 418


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