BLASTX nr result

ID: Bupleurum21_contig00017194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017194
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606793.1| F-box/kelch-repeat protein [Medicago truncat...    72   2e-10
ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    72   2e-10
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-10
ref|XP_002885602.1| F-box family protein [Arabidopsis lyrata sub...    70   9e-10
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    69   2e-09

>ref|XP_003606793.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355507848|gb|AES88990.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 405

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
 Frame = +3

Query: 147 GSCNGIVCL---WNRFSKI--VYLWNPSIKKWKGLPQLIGTQVD------ILGFGYDSVL 293
           GSCNGI+CL     R +K+  V LWNPSIKK+K LP L  T V+      + GFGYD V 
Sbjct: 145 GSCNGILCLALKQKRVAKVNNVLLWNPSIKKFKLLPSLKNTPVNNCRHDPVFGFGYDHVF 204

Query: 294 DHFKVLGIDFPAEGAPILKVYSTGSDCWKELIMTFPNIRIDSCYLGSSVVANGVLYVYDC 473
           D +KV+ I    +G     +++ G+D W+ +   FP    D  ++  ++  N + Y+ + 
Sbjct: 205 DVYKVVVIFSKTQG----MIHTLGTDTWRLINGDFPLPVYDLKFVSGAL--NWIPYLKNY 258

Query: 474 AGWFIWFDLHKEDFGLVPNHPRFCFESSMSNILDYEGSAAMIFESFSHGTGLHLWTL-EF 650
                 FDL  E +  +   P +  E   +  LD       IF   S      +W + E+
Sbjct: 259 IHSLASFDLVTESYKRL-LQPNYGAEFVYNLNLDVSRDCLRIFA--SRQRFFDVWLMKEY 315

Query: 651 EGDGSGNVIWTKRFAI 698
             +GS    WTK F +
Sbjct: 316 GNEGS----WTKLFHV 327


>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
 Frame = +3

Query: 135 YRVIGSCNGIVCLWNRFSKIVYLWNPSIKKWKGLP---QLIGTQVDILGFGYDSVLDHFK 305
           Y +IGSCNGIVC+ +  + +V LWNPS KK K LP   +  G  +   GFGYDS+ D++K
Sbjct: 130 YFIIGSCNGIVCIADNHNGLVILWNPSTKKIKQLPLYEKSNGPTLMTFGFGYDSLNDNYK 189

Query: 306 VLGI--------DFPAEGAPILKVYSTGSDCWKELIMTFPNIRIDSCYLGSSVVANGVLY 461
           V+ +        D+       +KV++ G++ W+  I  +P   +    +    V+  + +
Sbjct: 190 VVVVLAYLVLDEDYRFFNKNKVKVHTLGTNIWR-TIQDYPFGGLPVPVMKGEFVSGTINW 248

Query: 462 VY-----DCAGWFIWFDLHKEDFGLV--PN--HPRFCFESSMSNILDYEGSAAMIFESFS 614
           +      +C  + + FDL KE +  +  PN      C  S++S + D             
Sbjct: 249 LLSEESSECPRFIVSFDLAKESYQKISPPNLGGVDVCDMSALSVLRD----------CLC 298

Query: 615 HGTGLHLWTLEFEGDGSGNVIWTKRFAI 698
             +G+ +W ++  G+      WTK F I
Sbjct: 299 VTSGVDVWVMKEYGNKES---WTKLFTI 323


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
 Frame = +3

Query: 135 YRVIGSCNGIVCLWNRFSKIV---YLWNPSIKKWKGL-PQLIGTQVDILGFGYDSVLDHF 302
           + VIGS NG++CL N F  ++    LWNP I+K+  + P+++G     +GFGYDS  + +
Sbjct: 98  FHVIGSSNGLICLANIFQSLIVSFILWNPLIQKYMIVKPRILGPVYSFVGFGYDSRANDY 157

Query: 303 KVLGI------DFPAEGAPILKVYSTGSDCWKELIMTFPNIRIDSCYLGSSVVANGVLYV 464
           K++ +       F +E  P + +YS     W+ +  T P +R D+    SS   NGV++ 
Sbjct: 158 KLIRMVSFQKSKFRSENFPEIALYSLNEGSWRGIRQTGP-LRYDTDQRVSSAFLNGVVHW 216

Query: 465 Y--------DCAGWFIWFDLHKEDF--GLVPNHPRFCFESSMSNILDYEGSAAMIFESFS 614
                      +   + FD+  E F    +P+       S +S ++  E S ++   SF 
Sbjct: 217 IAYRADQHEGVSNVVLGFDMSDEIFLEIALPSCLANVRPSCLSLMVYKESSISVCQASFL 276

Query: 615 HGTGLHLWTLEFEGDGSGNVIWTK 686
                H+W ++  G       WTK
Sbjct: 277 SSVQFHIWVMKEYGVVES---WTK 297


>ref|XP_002885602.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331442|gb|EFH61861.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 347

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
 Frame = +3

Query: 135 YRVIGSCNGIVCLWNRFSKIVYLWNPSIKKWKGLPQLIGTQVD--------ILGFGYDSV 290
           Y+V+G+C+G+VC    + K +YLWNP+IK  + LP   G+ ++          GFGYD  
Sbjct: 93  YQVVGTCHGLVCFHVDYEKSLYLWNPTIKVQQRLP---GSDLETSDDEFVVTYGFGYDES 149

Query: 291 LDHFKVLG-IDFPAEGAPILKVYSTGSDCWKELIMTFPNIRIDSCYLGSSVVANGVL--- 458
            D +KV+  +    +     K+YST    W      FP+  + +    S V  NG L   
Sbjct: 150 EDDYKVVALLQKRHQMKTEAKIYSTRQKLWSS-NTCFPSGVVVADKSRSGVYINGTLNWA 208

Query: 459 YVYDCAGW-FIWFDLHKEDFGLVPNHPRFCFESSMSNIL-DYEGSAAMIFESFSHGTGLH 632
                + W  I +D+ +++F  +P  P +C     +  L D  G  +M+   +  G    
Sbjct: 209 ATSSSSPWTIISYDMSRDEFKQLPG-PVYCSRGCFTMTLGDLRGCLSMV--CYCKGANAD 265

Query: 633 LWTLEFEGDGSGNVIWTKRFAI 698
           +W ++  G+G     W+K  +I
Sbjct: 266 IWVMKEFGEGES---WSKLLSI 284


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
 Frame = +3

Query: 135 YRVIGSCNGIVCLW-NRFSKIVYLWNPSIKKWKGLP----QLIGTQVDILGFGYDSVLDH 299
           YR IGSCNGIVCL  N ++ +V  WNPS +K+K LP       G  V   GFGYDS  D+
Sbjct: 119 YRFIGSCNGIVCLADNEYTSLVICWNPSTRKFKELPLFEKPTTGLNVMTFGFGYDSSKDN 178

Query: 300 FKVLGI--------DFPAEGAPILKVYSTGSDCWKELIMTFPNIRIDSCYLGSSVVANGV 455
           +KV+ +        D+       + V++ G++ W+  I  +P   +         V+  +
Sbjct: 179 YKVVVVLDYQFLDEDYSFVNKTQVMVHTLGTNIWR-TIQEYPFGGLPVPVKKGEFVSGTI 237

Query: 456 LYVY-----DCAGWFIWFDLHKEDF 515
            +++     +C  + + FDL KE +
Sbjct: 238 NWLFSEESLECPCFIVSFDLAKESY 262


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