BLASTX nr result

ID: Bupleurum21_contig00017181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017181
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552081.1| PREDICTED: uncharacterized protein At4g13200...    95   7e-18
ref|XP_003520920.1| PREDICTED: uncharacterized protein LOC100800...    94   9e-18
ref|NP_193056.1| uncharacterized protein [Arabidopsis thaliana] ...    92   4e-17
gb|AAM62995.1| unknown [Arabidopsis thaliana]                          92   4e-17
ref|XP_002863161.1| hypothetical protein ARALYDRAFT_497076 [Arab...    89   3e-16

>ref|XP_003552081.1| PREDICTED: uncharacterized protein At4g13200, chloroplastic-like
           [Glycine max]
          Length = 193

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/62 (79%), Positives = 55/62 (88%), Gaps = 3/62 (4%)
 Frame = -3

Query: 442 GPSSPDE---NKTVLDAFFLGKALAEALNERIESTVGEVLSTIGKLQAEQLKQVQDFQEE 272
           GP S D    N++VLDAFFLGKA+AEALNERIESTVGE+LST+G+LQAEQ KQVQDFQEE
Sbjct: 57  GPGSGDSDSSNRSVLDAFFLGKAVAEALNERIESTVGEILSTVGRLQAEQQKQVQDFQEE 116

Query: 271 VL 266
           VL
Sbjct: 117 VL 118


>ref|XP_003520920.1| PREDICTED: uncharacterized protein LOC100800588 [Glycine max]
          Length = 196

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 3/62 (4%)
 Frame = -3

Query: 442 GPSSPDE---NKTVLDAFFLGKALAEALNERIESTVGEVLSTIGKLQAEQLKQVQDFQEE 272
           GP S D    N+++LDAFFLGKA+AEALNERIESTVGE+LST+G+LQAEQ KQVQDFQEE
Sbjct: 61  GPGSGDSDSSNRSILDAFFLGKAVAEALNERIESTVGEILSTVGRLQAEQQKQVQDFQEE 120

Query: 271 VL 266
           VL
Sbjct: 121 VL 122


>ref|NP_193056.1| uncharacterized protein [Arabidopsis thaliana]
           gi|147742899|sp|Q8LDV3.2|Y4320_ARATH RecName:
           Full=Uncharacterized protein At4g13200, chloroplastic;
           Flags: Precursor gi|4753654|emb|CAB41930.1| putative
           protein [Arabidopsis thaliana]
           gi|7268022|emb|CAB78362.1| putative protein [Arabidopsis
           thaliana] gi|17380654|gb|AAL36157.1| unknown protein
           [Arabidopsis thaliana] gi|21436277|gb|AAM51277.1|
           unknown protein [Arabidopsis thaliana]
           gi|332657844|gb|AEE83244.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 185

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = -3

Query: 436 SSPDENKTVLDAFFLGKALAEALNERIESTVGEVLSTIGKLQAEQLKQVQDFQEEVL 266
           S  +ENK+VLDAFFLGKALAE +NERIESTVGEVLSTIGK QAEQ KQVQ+ QEEVL
Sbjct: 64  SGENENKSVLDAFFLGKALAEVINERIESTVGEVLSTIGKFQAEQQKQVQEIQEEVL 120


>gb|AAM62995.1| unknown [Arabidopsis thaliana]
          Length = 185

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = -3

Query: 436 SSPDENKTVLDAFFLGKALAEALNERIESTVGEVLSTIGKLQAEQLKQVQDFQEEVL 266
           S  +ENK+VLDAFFLGKALAE +NERIESTVGEVLSTIGK QAEQ KQVQ+ QEEVL
Sbjct: 64  SGENENKSVLDAFFLGKALAEVINERIESTVGEVLSTIGKFQAEQQKQVQEIQEEVL 120


>ref|XP_002863161.1| hypothetical protein ARALYDRAFT_497076 [Arabidopsis lyrata subsp.
           lyrata] gi|297308995|gb|EFH39420.1| hypothetical protein
           ARALYDRAFT_497076 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/57 (78%), Positives = 50/57 (87%)
 Frame = -3

Query: 436 SSPDENKTVLDAFFLGKALAEALNERIESTVGEVLSTIGKLQAEQLKQVQDFQEEVL 266
           S  +EN++VLDAFFLGKALAE +NERIESTVGEVL TIGK QAEQ KQVQ+ QEEVL
Sbjct: 62  SGENENRSVLDAFFLGKALAEVINERIESTVGEVLGTIGKFQAEQQKQVQEIQEEVL 118


Top