BLASTX nr result

ID: Bupleurum21_contig00017165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017165
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311443.1| predicted protein [Populus trichocarpa] gi|2...   211   2e-52
ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257...   205   1e-50
ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257...   205   1e-50
emb|CBI27058.3| unnamed protein product [Vitis vinifera]              205   1e-50

>ref|XP_002311443.1| predicted protein [Populus trichocarpa] gi|222851263|gb|EEE88810.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  211 bits (538), Expect = 2e-52
 Identities = 141/312 (45%), Positives = 179/312 (57%), Gaps = 48/312 (15%)
 Frame = -3

Query: 1110 RKIQVFQRELPLCLDLVSLAIEKCRKEIS-------CGGQSE--EYTSRKRPVFEEFIPM 958
            RKIQVF+RELPLCL+LV+ AIE C++E+S         GQSE  E TS + PV EEFIP+
Sbjct: 28   RKIQVFERELPLCLELVTQAIEACKRELSGTTTEYNMHGQSECSEQTSSEGPVLEEFIPI 87

Query: 957  KNMSSLSREE-EGDICREK-----------NIPIGNNCGNDHKSSLKSDWLTSVQLWKHA 814
            K   S    + E D  +E+           +I  GNN   DHK   KSDWL SVQLW H+
Sbjct: 88   KRTHSYDENDNENDDHQEQQSHDNSKRNKTSISSGNN---DHKK--KSDWLRSVQLWNHS 142

Query: 813  PN--QEELAKEVA--VQKNGSGGGFQ---RERSVGSSAK------PQQVKASMTAESG-- 679
            P+  Q+++ K     V++NG+GG FQ   RE+S+G ++       P  V AS T+ +   
Sbjct: 143  PDLPQKQVLKAAVTEVKRNGAGGAFQPFHREKSIGKTSNQAIAKAPTSVPASTTSSTAVV 202

Query: 678  -----GDGSC------GGNC-KRRRSWSPELHRRFVAALEQLGGVLVATPKKIREIMKVD 535
                 G GS       GGN  K+RR WSPELHRRF+ AL QLGG   ATPK+IRE+MKVD
Sbjct: 203  ATGGIGGGSNKKEDIDGGNQRKQRRCWSPELHRRFLHALRQLGGSHAATPKQIRELMKVD 262

Query: 534  GLTTNEIKSHLQKYRLHARASTPETQXXXXXXXXXXXXXXXXXXXXXXXPSHVQAVPQFV 355
            GLT +E+KSHLQKYRLH R  +P                           +  Q  PQFV
Sbjct: 263  GLTNDEVKSHLQKYRLHTRRPSPTIHN-----------------------NSNQQAPQFV 299

Query: 354  VLGGLWIPPPEH 319
            V+GG+W+PPPE+
Sbjct: 300  VVGGIWVPPPEY 311


>ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|222864997|gb|EEF02128.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  209 bits (531), Expect = 1e-51
 Identities = 143/319 (44%), Positives = 179/319 (56%), Gaps = 55/319 (17%)
 Frame = -3

Query: 1110 RKIQVFQRELPLCLDLVSLAIEKCRKEIS-------CGGQSE--EYTSRKRPVFEEFIPM 958
            RKIQVF+RELPLCL+LV+ AIE C++E+S         GQSE  E TS + PV EEFIP+
Sbjct: 22   RKIQVFERELPLCLELVTQAIEACKRELSGTTEDHNMHGQSECSEQTSSEGPVLEEFIPI 81

Query: 957  KNMSSLSREE---------------EGDICREK-NIPIGNNCGNDHKSSLKSDWLTSVQL 826
            K   S   EE               + D  R K N  I NN   DHK   KSDWL SVQL
Sbjct: 82   KRTHSSDDEENDNNHDDDDHQEQQSQNDNKRNKSNSSISNN---DHKK--KSDWLRSVQL 136

Query: 825  WKHAPN---QEELAKEVAV---QKNGSGGGFQ---RERSVGSSAK------PQQVKASMT 691
            W  +P+   +++L ++ AV   ++NG+GG FQ   RE+SVG S+       P  V AS T
Sbjct: 137  WNQSPDPPQKQDLPRKAAVTEVKRNGAGGAFQPFHREKSVGKSSNQAISKAPPSVPASAT 196

Query: 690  -----AESGGDGSCGGNCK----------RRRSWSPELHRRFVAALEQLGGVLVATPKKI 556
                 A +GG G  GGN K          +RR WSPELHRRF+ +L+QLGG   ATPK+I
Sbjct: 197  SSIAGAVTGGTGG-GGNKKEDKEKGNQRKQRRCWSPELHRRFLHSLQQLGGSHAATPKQI 255

Query: 555  REIMKVDGLTTNEIKSHLQKYRLHARASTPETQXXXXXXXXXXXXXXXXXXXXXXXPSHV 376
            RE+MKVDGLT +E+KSHLQKYRLH R  +P                           +  
Sbjct: 256  RELMKVDGLTNDEVKSHLQKYRLHTRRPSPTIH-----------------------TNSS 292

Query: 375  QAVPQFVVLGGLWIPPPEH 319
            Q  PQFVV+GG+W+PP E+
Sbjct: 293  QQAPQFVVVGGIWVPPTEY 311


>ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257723 isoform 1 [Vitis
            vinifera]
          Length = 369

 Score =  205 bits (522), Expect = 1e-50
 Identities = 133/289 (46%), Positives = 166/289 (57%), Gaps = 25/289 (8%)
 Frame = -3

Query: 1110 RKIQVFQRELPLCLDLVSLAIEKCRKEIS------CGGQSE--EYTSRKRPVFEEFIPMK 955
            RKIQVFQRELPLCL+LVS AIE CR+++S        GQSE  E TS   PV EEFIP+K
Sbjct: 29   RKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDGPVLEEFIPIK 88

Query: 954  NMSSLSREEEGDICREKNIPIGNNCGNDHKSSLKSDWLTSVQLWKHAPN---QEELAKEV 784
              S    E++       + P  N   N+ KS  KSDWL SVQLW   P+   +E+  K++
Sbjct: 89   KTSDDEDEQQS------HQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDTPKKI 142

Query: 783  A---VQKNGSG-GGFQRERSVGSS-AKPQQVKASMTAESGGDGSCGGNC---------KR 646
                V+KNG     F+R+++VG++         S TAE+    S G            K 
Sbjct: 143  PSMEVKKNGGAFHPFKRDKAVGTNPTSAPSAATSSTAETATGCSSGSRKEEKEGQSQRKA 202

Query: 645  RRSWSPELHRRFVAALEQLGGVLVATPKKIREIMKVDGLTTNEIKSHLQKYRLHARASTP 466
            RR WSPELHRRF+ AL+QLGG  VATPK+IRE+MKVDGLT +E+KSHLQKYRLH R   P
Sbjct: 203  RRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPNP 262

Query: 465  ETQXXXXXXXXXXXXXXXXXXXXXXXPSHVQAVPQFVVLGGLWIPPPEH 319
              Q                         + QA PQFVV+GG+W+PPPE+
Sbjct: 263  AIQHN----------------------GNPQA-PQFVVVGGIWVPPPEY 288


>ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257723 isoform 2 [Vitis
            vinifera]
          Length = 362

 Score =  205 bits (522), Expect = 1e-50
 Identities = 133/289 (46%), Positives = 166/289 (57%), Gaps = 25/289 (8%)
 Frame = -3

Query: 1110 RKIQVFQRELPLCLDLVSLAIEKCRKEIS------CGGQSE--EYTSRKRPVFEEFIPMK 955
            RKIQVFQRELPLCL+LVS AIE CR+++S        GQSE  E TS   PV EEFIP+K
Sbjct: 22   RKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDGPVLEEFIPIK 81

Query: 954  NMSSLSREEEGDICREKNIPIGNNCGNDHKSSLKSDWLTSVQLWKHAPN---QEELAKEV 784
              S    E++       + P  N   N+ KS  KSDWL SVQLW   P+   +E+  K++
Sbjct: 82   KTSDDEDEQQS------HQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDTPKKI 135

Query: 783  A---VQKNGSG-GGFQRERSVGSS-AKPQQVKASMTAESGGDGSCGGNC---------KR 646
                V+KNG     F+R+++VG++         S TAE+    S G            K 
Sbjct: 136  PSMEVKKNGGAFHPFKRDKAVGTNPTSAPSAATSSTAETATGCSSGSRKEEKEGQSQRKA 195

Query: 645  RRSWSPELHRRFVAALEQLGGVLVATPKKIREIMKVDGLTTNEIKSHLQKYRLHARASTP 466
            RR WSPELHRRF+ AL+QLGG  VATPK+IRE+MKVDGLT +E+KSHLQKYRLH R   P
Sbjct: 196  RRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPNP 255

Query: 465  ETQXXXXXXXXXXXXXXXXXXXXXXXPSHVQAVPQFVVLGGLWIPPPEH 319
              Q                         + QA PQFVV+GG+W+PPPE+
Sbjct: 256  AIQHN----------------------GNPQA-PQFVVVGGIWVPPPEY 281


>emb|CBI27058.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score =  205 bits (522), Expect = 1e-50
 Identities = 133/289 (46%), Positives = 166/289 (57%), Gaps = 25/289 (8%)
 Frame = -3

Query: 1110 RKIQVFQRELPLCLDLVSLAIEKCRKEIS------CGGQSE--EYTSRKRPVFEEFIPMK 955
            RKIQVFQRELPLCL+LVS AIE CR+++S        GQSE  E TS   PV EEFIP+K
Sbjct: 16   RKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDGPVLEEFIPIK 75

Query: 954  NMSSLSREEEGDICREKNIPIGNNCGNDHKSSLKSDWLTSVQLWKHAPN---QEELAKEV 784
              S    E++       + P  N   N+ KS  KSDWL SVQLW   P+   +E+  K++
Sbjct: 76   KTSDDEDEQQS------HQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDTPKKI 129

Query: 783  A---VQKNGSG-GGFQRERSVGSS-AKPQQVKASMTAESGGDGSCGGNC---------KR 646
                V+KNG     F+R+++VG++         S TAE+    S G            K 
Sbjct: 130  PSMEVKKNGGAFHPFKRDKAVGTNPTSAPSAATSSTAETATGCSSGSRKEEKEGQSQRKA 189

Query: 645  RRSWSPELHRRFVAALEQLGGVLVATPKKIREIMKVDGLTTNEIKSHLQKYRLHARASTP 466
            RR WSPELHRRF+ AL+QLGG  VATPK+IRE+MKVDGLT +E+KSHLQKYRLH R   P
Sbjct: 190  RRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPNP 249

Query: 465  ETQXXXXXXXXXXXXXXXXXXXXXXXPSHVQAVPQFVVLGGLWIPPPEH 319
              Q                         + QA PQFVV+GG+W+PPPE+
Sbjct: 250  AIQHN----------------------GNPQA-PQFVVVGGIWVPPPEY 275


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