BLASTX nr result

ID: Bupleurum21_contig00017164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017164
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   177   2e-42
gb|ADV19264.1| hypothetical protein-like protein [Helleborus ori...   173   2e-41
ref|XP_002516841.1| NADH dehydrogenase, putative [Ricinus commun...   171   9e-41
ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   170   2e-40
ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|1...   170   2e-40

>ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B isoform 2 [Vitis vinifera]
           gi|225432428|ref|XP_002278102.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B isoform 1 [Vitis vinifera]
           gi|297736935|emb|CBI26136.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score =  177 bits (448), Expect = 2e-42
 Identities = 81/105 (77%), Positives = 95/105 (90%)
 Frame = +1

Query: 82  MATAVNSIEDPIPTSAVLMATSKHIATRCRNENVAFLKCKKNDANPEKCLDKGQQVTRCV 261
           MA+ V++   PIPTSAVLMA+SKHI +RC +ENVAFLKCKK D NPEKCLDKG++VTRCV
Sbjct: 1   MASTVDAGGHPIPTSAVLMASSKHIGSRCFSENVAFLKCKKQDPNPEKCLDKGREVTRCV 60

Query: 262 FGLLKDLHRSCTKEMDSYAHCMYYNTDEFELCRKEQKEFEKACPL 396
           FGLLKDLH+ CTKEMD+YA CMYY+T+EF+LCRKEQ+EFEKACPL
Sbjct: 61  FGLLKDLHQRCTKEMDAYAGCMYYHTNEFDLCRKEQQEFEKACPL 105


>gb|ADV19264.1| hypothetical protein-like protein [Helleborus orientalis]
          Length = 110

 Score =  173 bits (439), Expect = 2e-41
 Identities = 75/100 (75%), Positives = 91/100 (91%)
 Frame = +1

Query: 94  VNSIEDPIPTSAVLMATSKHIATRCRNENVAFLKCKKNDANPEKCLDKGQQVTRCVFGLL 273
           VN++ +PIPTS+VLMA+S+HI+TRC+ EN+AFL CKK D NPEKCLDKGQ+VTRCV GLL
Sbjct: 8   VNAVGEPIPTSSVLMASSRHISTRCKGENMAFLTCKKKDGNPEKCLDKGQEVTRCVLGLL 67

Query: 274 KDLHRSCTKEMDSYAHCMYYNTDEFELCRKEQKEFEKACP 393
           K LH++CTKEMD+YA CMYYNT+EF+LCRKEQ+EFEK CP
Sbjct: 68  KSLHQTCTKEMDAYAGCMYYNTNEFDLCRKEQQEFEKVCP 107


>ref|XP_002516841.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223543929|gb|EEF45455.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 106

 Score =  171 bits (433), Expect = 9e-41
 Identities = 79/105 (75%), Positives = 89/105 (84%)
 Frame = +1

Query: 82  MATAVNSIEDPIPTSAVLMATSKHIATRCRNENVAFLKCKKNDANPEKCLDKGQQVTRCV 261
           MA+AV++  +PIPTSAVL A+SKHI  RC  ENV FLKCKK D NPEKCLDKGQQVTRCV
Sbjct: 1   MASAVDTTGNPIPTSAVLTASSKHITARCFQENVDFLKCKKKDPNPEKCLDKGQQVTRCV 60

Query: 262 FGLLKDLHRSCTKEMDSYAHCMYYNTDEFELCRKEQKEFEKACPL 396
            GLLKDLH  CTKEMD+Y  CMYY+T+EF+LCRKEQ+ FEKACPL
Sbjct: 61  LGLLKDLHHRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACPL 105


>ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B-like [Cucumis sativus]
           gi|449488520|ref|XP_004158067.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B-like [Cucumis sativus]
          Length = 106

 Score =  170 bits (431), Expect = 2e-40
 Identities = 76/105 (72%), Positives = 92/105 (87%)
 Frame = +1

Query: 82  MATAVNSIEDPIPTSAVLMATSKHIATRCRNENVAFLKCKKNDANPEKCLDKGQQVTRCV 261
           MA+AV++  DPIPTSAVLM++SKHIA +CR+ENVA+L+CK+ D NPEKCLDKG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 262 FGLLKDLHRSCTKEMDSYAHCMYYNTDEFELCRKEQKEFEKACPL 396
             LLKDLH+ CTKEMD+Y  CMYY+T+EF+LCRKEQ+ FEK CPL
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPL 105


>ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|118483508|gb|ABK93652.1|
           unknown [Populus trichocarpa]
           gi|118487086|gb|ABK95373.1| unknown [Populus
           trichocarpa] gi|222851629|gb|EEE89176.1| predicted
           protein [Populus trichocarpa]
          Length = 107

 Score =  170 bits (430), Expect = 2e-40
 Identities = 81/106 (76%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
 Frame = +1

Query: 82  MAT-AVNSIEDPIPTSAVLMATSKHIATRCRNENVAFLKCKKNDANPEKCLDKGQQVTRC 258
           MAT AV++  +PIPTSAVL   SKHIATRC +ENV FLKCKK D NPEKCLDKGQQVTRC
Sbjct: 1   MATSAVDATGNPIPTSAVLTTASKHIATRCFSENVEFLKCKKKDPNPEKCLDKGQQVTRC 60

Query: 259 VFGLLKDLHRSCTKEMDSYAHCMYYNTDEFELCRKEQKEFEKACPL 396
           V GLLKDLH+ CTKEMD+Y  CMYY T+EF+LCRKEQ+ FEKACPL
Sbjct: 61  VLGLLKDLHQKCTKEMDAYVGCMYYYTNEFDLCRKEQQAFEKACPL 106


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