BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017157
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   144   4e-32
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   129   1e-27
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   109   1e-21
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   107   4e-21
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...   107   4e-21

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  144 bits (363), Expect = 4e-32
 Identities = 90/310 (29%), Positives = 138/310 (44%), Gaps = 1/310 (0%)
 Frame = +2

Query: 41   PKTCGFGFGFGAKPPRTEPCSPLRGAAVPITCPICLADIEHLLHVLFDYPFATQCWRHVG 220
            PK   F +        T     +R    P+ CPIC +++E  LH L +   A   W   G
Sbjct: 518  PKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESG 577

Query: 221  LSFDMQTV*SAPGWLVEKFEKENSEVLTKICTALWGIWYWHNKKVWEGKETTPTVAMEGS 400
            L+       S   WL   F   +  V  K     WG+W+  N  VW G+       + G 
Sbjct: 578  LAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGC 637

Query: 401  FKAVTEWKEARRVRAAETQKRCLDKAKEVHRWKPPEEGRLKVNVDASVFPGADTFTIGMI 580
            F  +  W  A      ET    +       +W+ P+ G +K+NVD +VFP  D   IG +
Sbjct: 638  FTMLESWFHAN-----ETLATAVTVPSYSSKWQKPDYGWIKINVDGAVFP--DKGAIGAV 690

Query: 581  LRDYKGSFVQGKNMCLPNPGSVLEAEAIGVREVLAWIKQLQLHNNMVESDSLLVVRAIKE 760
             RD++G F+ G     P+       EA+GVREVL+WI +      +VE+D L VV+AI+ 
Sbjct: 691  FRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQH 750

Query: 761  NAEYQLEVGEVLESCRRDLHSMPGTSISHVRKQANRVAHDIARLPCSIGCFNVF-TSPPS 937
             +      G ++  C   L  +    + + R+ AN  AH +A   CS    +++  +PP 
Sbjct: 751  KSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHIWGYTPPQ 810

Query: 938  YLLETILYDI 967
             +L  + YD+
Sbjct: 811  CILSCLHYDV 820


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  129 bits (324), Expect = 1e-27
 Identities = 71/210 (33%), Positives = 110/210 (52%)
 Frame = +2

Query: 320 LWGIWYWHNKKVWEGKETTPTVAMEGSFKAVTEWKEARRVRAAETQKRCLDKAKEVHRWK 499
           LW IW   N KVW+G+     +A++ + + + +W+ AR     + Q+      ++   W+
Sbjct: 3   LWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQVQQ----SPQDTIAWQ 58

Query: 500 PPEEGRLKVNVDASVFPGADTFTIGMILRDYKGSFVQGKNMCLPNPGSVLEAEAIGVREV 679
           PP  G LK NVDA++F   + F  GM +RD +G F++             EAEA+G+R+ 
Sbjct: 59  PPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDA 118

Query: 680 LAWIKQLQLHNNMVESDSLLVVRAIKENAEYQLEVGEVLESCRRDLHSMPGTSISHVRKQ 859
           + W+ QL+L N  +E D  LVV +I +    Q E G +++ CR  L       IS VR+Q
Sbjct: 119 ILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQ 178

Query: 860 ANRVAHDIARLPCSIGCFNVFTSPPSYLLE 949
           AN VAH  AR+      F +  + P  +LE
Sbjct: 179 ANVVAHSFARVSIFQPLFGLAFAKPESILE 208


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  109 bits (273), Expect = 1e-21
 Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 6/292 (2%)
 Frame = +2

Query: 110  RGAAVPITCPICLADIEHLLHVLFDYPFATQCWRHVGL-SFDMQTV*SAPGWLVEKFE-- 280
            RG     TC +C  + E  +H+ F    + QCW+ +GL S   Q       + V  FE  
Sbjct: 1450 RGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEIL 1509

Query: 281  --KENSEVLTKICTALWGIWYWHNKKVWEGKETTPTVAMEGSFKAVTEWKEARRVRAAET 454
               ++S+ +   C  +W IW   N  +W  +  T     +     +T W+ A+ +     
Sbjct: 1510 QELDSSQRVIWACV-MWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDI----- 1563

Query: 455  QKRCLDKAKEVHRWKPPEEGRLKVNVDASVFPGADTFTIGMILRDYKGSFVQGKNMCLPN 634
                         W+ P+EG  K NVDA+ F  ++   IG+ +RD  G  V+ +      
Sbjct: 1564 -------------WRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTL 1610

Query: 635  PGSVLEAEAIGVREVLAWIKQLQLHNNMVESDSLLVVRAIKENAEYQLEVGEVLESCRRD 814
               V E EAIG+   + W K+  L+N   E DS  VV +         ++G ++  CR  
Sbjct: 1611 LLDVPEGEAIGLLYAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTT 1670

Query: 815  LHS-MPGTSISHVRKQANRVAHDIARLPCSIGCFNVFTSPPSYLLETILYDI 967
              S    + +  +R+QAN V H +AR        + FT  P  + + ++ ++
Sbjct: 1671 FSSFFTNSRVEFIRRQANEVVHSLARAATFYASIHYFTVLPDCIQDVLINEM 1722


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 393

 Score =  107 bits (268), Expect = 4e-21
 Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 18/304 (5%)
 Frame = +2

Query: 110  RGAAVPITCPICLADIEHLLHVLFDYPFATQCWRHVG----LSFDMQTV*SAPGWLVEKF 277
            RG   P  C  C    E   H+ F    A   W        ++  +    +AP  +    
Sbjct: 89   RGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLL 148

Query: 278  EKENSEVLTKICTALWGIWYWHNKKVWEGKETTPTVAMEGSFKAVTEWKEARRVRAAETQ 457
            +K ++  +  I T +W IW   N K+W+    +    +E +   +  W++A   +    Q
Sbjct: 149  QKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKANHKQGLLGQ 208

Query: 458  KRCLDKAK-EVH------------RWKPPEEGRLKVNVDASVFPGADTFTIGMILRDYKG 598
                  ++ + H            RW+ P+ GRLK NVDAS    ++   IGM +RD +G
Sbjct: 209  VHSPTNSRPQTHDSQNTDNRYGNIRWRKPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEG 268

Query: 599  SFVQGKNMCLPNPGSVLEAEAIGVREVLAWIKQLQLHNNMVESDSLLVVRAIKENAEYQL 778
            + V+ K M       V   EA+G+     WI +LQL N   E DS  +     +      
Sbjct: 269  NHVRSKTMWFSPLCPVNIGEALGLYHATRWINELQLTNVDFEVDSKTIADYFNKARGDNT 328

Query: 779  EVGEVLESCRRDLH-SMPGTSISHVRKQANRVAHDIARLPCSIGCFNVFTSPPSYLLETI 955
            E G ++E+  +  +  +  + +   R+QAN VAH++A+       F++F   P+ + + I
Sbjct: 329  EFGSIMENTIQFCNIFLTNSHVEFTRRQANEVAHELAKAATLGPSFHIFDESPTCISDLI 388

Query: 956  LYDI 967
              ++
Sbjct: 389  FNEM 392


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score =  107 bits (268), Expect = 4e-21
 Identities = 68/197 (34%), Positives = 99/197 (50%)
 Frame = +2

Query: 344 NKKVWEGKETTPTVAMEGSFKAVTEWKEARRVRAAETQKRCLDKAKEVHRWKPPEEGRLK 523
           N  +WEG+   P   +  +   + +W  A  ++    + R +    EV    PP+ G +K
Sbjct: 121 NLCLWEGQLQQPAQTVFCALSFLCDWASACSLQRNGNEARVM---LEVLTCCPPQPGFVK 177

Query: 524 VNVDASVFPGADTFTIGMILRDYKGSFVQGKNMCLPNPGSVLEAEAIGVREVLAWIKQLQ 703
            NVD +VF  +     GM++RD  GSFV G +   P   +V  AEAIG+RE + W+  L 
Sbjct: 178 CNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLG 237

Query: 704 LHNNMVESDSLLVVRAIKENAEYQLEVGEVLESCRRDLHSMPGTSISHVRKQANRVAHDI 883
             N + E D+ +VV A+   A    E G V+  CR  L      S+  +RKQAN VAH +
Sbjct: 238 RSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSL 297

Query: 884 ARLPCSIGCFNVFTSPP 934
           AR       FN+F+ PP
Sbjct: 298 ARASHLQDGFNMFSVPP 314