BLASTX nr result

ID: Bupleurum21_contig00017146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017146
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326771.1| predicted protein [Populus trichocarpa] gi|2...   254   3e-65
gb|ABK94346.1| unknown [Populus trichocarpa]                          254   3e-65
ref|XP_002519880.1| ankyrin repeat-containing protein, putative ...   251   1e-64
ref|XP_002304382.1| predicted protein [Populus trichocarpa] gi|2...   246   8e-63
gb|AFK49276.1| unknown [Lotus japonicus]                              242   1e-61

>ref|XP_002326771.1| predicted protein [Populus trichocarpa] gi|222834093|gb|EEE72570.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  254 bits (648), Expect = 3e-65
 Identities = 135/243 (55%), Positives = 172/243 (70%), Gaps = 2/243 (0%)
 Frame = +1

Query: 7   GGGD--VHAAARTGDLTAVQLICSTNPLAVNSRDKHSRTPLHLAAWSGHPQVVSYLCENK 180
           GGGD  +HAA+R+GD+ A++ I S+NPLA+NSRDKHSRTPLHLAAWSG  + V+YLC++K
Sbjct: 10  GGGDAELHAASRSGDMKAMETIVSSNPLAINSRDKHSRTPLHLAAWSGQAEAVTYLCKHK 69

Query: 181 ADVGAAAIDNMGAIHFAAQKGHXXXXXXXXXXXXXXXXXNRKGMTALHYAAQGSSLELVK 360
           ADVGAAA+D+MGAIHFA+QKGH                  RKG+T LHY  QGS LELVK
Sbjct: 70  ADVGAAAMDDMGAIHFASQKGHLEVVRTLLSSGASIKASTRKGLTPLHYGVQGSHLELVK 129

Query: 361 YLVKKGADLHAKTKAGKTPVDLASNEEIRSVLVESESMSKNLTTNDEKKAEDEQGLCKEI 540
           YLVKKGA L  +TKAG TP+DLA+NEEIR  L ESE  SK  T N + KAE  +     +
Sbjct: 130 YLVKKGASLTVRTKAGMTPLDLATNEEIRLFLEESEKTSKKETLNGKDKAEVSEPK-TSL 188

Query: 541 EEDSKPEGAVSKSEDADLVKDESAKRKNEGEDATKENFPEQKKAKIALNHLLASDDAQDE 720
           E+ S+  G  + + + +   +ES KRK E +D TKE   E K+A++ALNHLL++DD Q+E
Sbjct: 189 EDKSEYSGGEATAGEHEEQVNESVKRKGEADD-TKETSSELKRARVALNHLLSADDTQEE 247

Query: 721 DNL 729
           +NL
Sbjct: 248 ENL 250


>gb|ABK94346.1| unknown [Populus trichocarpa]
          Length = 250

 Score =  254 bits (648), Expect = 3e-65
 Identities = 135/243 (55%), Positives = 172/243 (70%), Gaps = 2/243 (0%)
 Frame = +1

Query: 7   GGGD--VHAAARTGDLTAVQLICSTNPLAVNSRDKHSRTPLHLAAWSGHPQVVSYLCENK 180
           GGGD  +HAA+R+GD+ A++ I S+NPLA+NSRDKHSRTPLHLAAWSG  + V+YLC++K
Sbjct: 10  GGGDAELHAASRSGDMKAMETIVSSNPLAINSRDKHSRTPLHLAAWSGQAEAVTYLCKHK 69

Query: 181 ADVGAAAIDNMGAIHFAAQKGHXXXXXXXXXXXXXXXXXNRKGMTALHYAAQGSSLELVK 360
           ADVGAAA+D+MGAIHFA+QKGH                  RKG+T LHY  QGS LELVK
Sbjct: 70  ADVGAAAMDDMGAIHFASQKGHLEVVRTLLSSGASIKASTRKGLTPLHYGVQGSHLELVK 129

Query: 361 YLVKKGADLHAKTKAGKTPVDLASNEEIRSVLVESESMSKNLTTNDEKKAEDEQGLCKEI 540
           YLVKKGA L  +TKAG TP+DLA+NEEIR  L ESE  SK  T N + KAE  +     +
Sbjct: 130 YLVKKGASLTVRTKAGMTPLDLATNEEIRLFLEESEKTSKKETLNGKDKAEVSEPK-TSL 188

Query: 541 EEDSKPEGAVSKSEDADLVKDESAKRKNEGEDATKENFPEQKKAKIALNHLLASDDAQDE 720
           E+ S+  G  + + + +   +ES KRK E +D TKE   E K+A++ALNHLL++DD Q+E
Sbjct: 189 EDKSEYSGGEATAGEHEEQVNESVKRKGEADD-TKETSTELKRARVALNHLLSADDTQEE 247

Query: 721 DNL 729
           +NL
Sbjct: 248 ENL 250


>ref|XP_002519880.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223540926|gb|EEF42484.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 249

 Score =  251 bits (642), Expect = 1e-64
 Identities = 140/246 (56%), Positives = 166/246 (67%), Gaps = 5/246 (2%)
 Frame = +1

Query: 7   GGGDVHAAARTGDLTAVQLICSTNPLAVNSRDKHSRTPLHLAAWSGHPQVVSYLCENKAD 186
           G G++HAAAR+GDL AVQ I S NPLAVNSRDKHSRTPLHLAAWSGH  VV+YL + KAD
Sbjct: 14  GEGELHAAARSGDLNAVQSILSLNPLAVNSRDKHSRTPLHLAAWSGHVHVVNYLSQQKAD 73

Query: 187 VGAAAIDNMGAIHFAAQKGHXXXXXXXXXXXXXXXXXNRKGMTALHYAAQGSSLELVKYL 366
           V AAA+D+MGAIHFAAQKGH                  RKG+T LHYAAQGS+L+LVKYL
Sbjct: 74  VSAAAMDDMGAIHFAAQKGHLDVVRTLLSSGVSVKATTRKGLTPLHYAAQGSNLDLVKYL 133

Query: 367 VKKGADLHAKTKAGKTPVDLASNEEIRSVLVESESMSKNLTTNDEKKAEDEQGLCKEIEE 546
           VKKGA L  KTKAGKTP+DLASNEEI   L +SE  S+    N ++K E         E 
Sbjct: 134 VKKGASLATKTKAGKTPLDLASNEEIHLFLEKSEQSSEKANLNAKEKLE---------ES 184

Query: 547 DSKPEGAVSKSEDAD-----LVKDESAKRKNEGEDATKENFPEQKKAKIALNHLLASDDA 711
           D KP     KSE AD       + E+   K +GE+ TKE   EQK+ KI LNHLL++DD 
Sbjct: 185 DPKP-AMPDKSEIADGEAPGSEEQEAENVKRKGEEDTKETSGEQKRRKITLNHLLSADDT 243

Query: 712 QDEDNL 729
           Q+++N+
Sbjct: 244 QEDENM 249


>ref|XP_002304382.1| predicted protein [Populus trichocarpa] gi|222841814|gb|EEE79361.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  246 bits (627), Expect = 8e-63
 Identities = 131/241 (54%), Positives = 170/241 (70%), Gaps = 2/241 (0%)
 Frame = +1

Query: 7   GGGD--VHAAARTGDLTAVQLICSTNPLAVNSRDKHSRTPLHLAAWSGHPQVVSYLCENK 180
           GGGD  +HAAAR+GD+ AV+ I S+NPLA+NSRDKHSRTPLHLAAWSG  +VVSYLC++K
Sbjct: 10  GGGDTELHAAARSGDMKAVESIVSSNPLAINSRDKHSRTPLHLAAWSGQAEVVSYLCKHK 69

Query: 181 ADVGAAAIDNMGAIHFAAQKGHXXXXXXXXXXXXXXXXXNRKGMTALHYAAQGSSLELVK 360
           ADVGAAA+D+MGAIHFAAQKGH                  RKG+T LHYA QGS LELVK
Sbjct: 70  ADVGAAAMDDMGAIHFAAQKGHSEVVRTLLSSGASIKASTRKGLTPLHYAVQGSHLELVK 129

Query: 361 YLVKKGADLHAKTKAGKTPVDLASNEEIRSVLVESESMSKNLTTNDEKKAEDEQGLCKEI 540
           YLV+KGA L+ +TKAG TP+DLA+NEEI   L ESE   K  T + + K E  +     +
Sbjct: 130 YLVRKGASLNVRTKAGMTPLDLATNEEIHVFLEESERTPKKGTLDGKDKPEASEPK-TSL 188

Query: 541 EEDSKPEGAVSKSEDADLVKDESAKRKNEGEDATKENFPEQKKAKIALNHLLASDDAQDE 720
           ++ S+  G  + + + +  ++ + KRK E +DA KE   E K+A++ALNHLL++DD Q+E
Sbjct: 189 QDKSENSGGEANAGEHEEQENRNVKRKGEEDDA-KETSSEPKRARVALNHLLSADDTQEE 247

Query: 721 D 723
           +
Sbjct: 248 N 248


>gb|AFK49276.1| unknown [Lotus japonicus]
          Length = 269

 Score =  242 bits (617), Expect = 1e-61
 Identities = 136/256 (53%), Positives = 170/256 (66%), Gaps = 18/256 (7%)
 Frame = +1

Query: 16  DVHAAARTGDLTAVQLICSTNPLAVNSRDKHSRTPLHLAAWSGHPQVVSYLCENKADVGA 195
           D+H AAR+GDLTAVQ I  +NPLAVNSRDKHSRTPLHLAA++GH +VVSYLC+NKA VGA
Sbjct: 14  DLHTAARSGDLTAVQSILISNPLAVNSRDKHSRTPLHLAAFAGHAEVVSYLCQNKAAVGA 73

Query: 196 AAIDNMGAIHFAAQKGHXXXXXXXXXXXXXXXXXNRKGMTALHYAAQGSSLELVKYLVKK 375
           AA+D+M A+HFAAQKGH                  RKGM+ LHYAAQGS LELVKYL KK
Sbjct: 74  AAMDDMAAVHFAAQKGHLRVVQALVSAGAAIKSFTRKGMSPLHYAAQGSHLELVKYLAKK 133

Query: 376 GADLHAKTKAGKTPVDLASNEEIRSVLVESESMSKNLTTND-----EKKAEDEQGLCKEI 540
           G  L AKTKAGKTP+DLA++EE+RS L   E  +KN  + D     E K +D  G  K+ 
Sbjct: 134 GVSLSAKTKAGKTPLDLATDEEVRSFLEGYERSAKNGESKDKDVGGESKDKDGAGESKDK 193

Query: 541 EE----DSK-----PEGAVSKSED----ADLVKDESAKRKNEGEDATKENFPEQKKAKIA 681
           +E    D+K      EG +   E      D  K E  KRK   +D  +E+ P+ KKA++ 
Sbjct: 194 DEAGESDTKALSLESEGNLGADERPAAVVDEEKGEREKRKGNEDDEPREDLPQPKKARVK 253

Query: 682 LNHLLASDDAQDEDNL 729
           L+HL +SDDA++E+N+
Sbjct: 254 LSHLQSSDDAEEEENM 269


Top