BLASTX nr result

ID: Bupleurum21_contig00017142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017142
         (1550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g...    66   3e-08
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    61   9e-07

>ref|XP_002321943.1| f-box family protein [Populus trichocarpa]
            gi|222868939|gb|EEF06070.1| f-box family protein [Populus
            trichocarpa]
          Length = 360

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 8/231 (3%)
 Frame = -2

Query: 1405 FELPNS-ITLPALTNLHLKNCKIPQKFWNLPNLFSLTLDNVQF--PKDLSDFFPALVNLR 1235
            F LP + +T  +L  L L         + LPNL SL+L +  F  P D  D F + + L+
Sbjct: 134  FSLPPAFLTCQSLKTLQLSGFNFKALGFALPNLISLSLSHCSFTNPSDFDDPFASCLKLK 193

Query: 1234 NLTL----FFQTKIVQDFFIKCPQLVNLEINTSMTITISPSV-KIIVLAPKIRNFSSDGF 1070
            NL+L    F  +K+++   I   QL+NLEI     + ++  + +I + APK+ +F     
Sbjct: 194  NLSLRSCSFLSSKVLK---ISGLQLLNLEIVGLGYMNLAGLLYRIDIFAPKLISFVYKLS 250

Query: 1069 FPITFGDSELENVNIKLQENIRYKDSAPSNKLKNYYRQVEQMFVGLGSAKILTLDLETIK 890
              + F    L ++NI      R       +K K  Y  +  MF GLG+A+ + L  +TI+
Sbjct: 251  HVVDFSGLHLPSLNI-----ARVHVCTKQDKKKEAYLGLINMFKGLGNAQSVMLHSQTIE 305

Query: 889  ALTXXXXXXXXXXXPFYNLKYVKVPPECIESCISARLKLYLLGCCPEATIV 737
             L            PF  LK ++V P   +  +   +  YLLG  P A  +
Sbjct: 306  VLGSFPGLLEQEPSPFKRLKSLQVAPN-NKPFVPPHVMTYLLGGTPLAETI 355


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 18/277 (6%)
 Frame = -2

Query: 1540 LESDCWDLPVLTNLHWSWSYYRKFHKLPESYLIC--LPSLQTLFLDGFELPNSITLPALT 1367
            +++ C D+P++               LP  +  C  L SL+     G  LP S+ LP+L 
Sbjct: 130  IDTACRDVPIV---------------LPRCFFNCESLRSLKLRIDGGIALPKSLGLPSLK 174

Query: 1366 NLHLKNCK--IPQKFWNLPNLFSLTLDNVQFPKDLSDFFPALVNLRNLTLFFQTKIVQDF 1193
             LHL   +    + F + PNL +LT++++                           +++F
Sbjct: 175  TLHLGGAQNFDGKIFSSCPNLENLTIEDICL-----------------------NTIENF 211

Query: 1192 FIKCPQLVNLEINTSMTITISPSVKIIVLAPKIRNFSSDGFFPITFGD---SELENVNIK 1022
             I    L +LEI       I    K+++ APK+ +F  DG  P+ + +   + L++VN+ 
Sbjct: 212  NIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNVV 271

Query: 1021 LQENIRYKD-----------SAPSNKLKNYYRQVEQMFVGLGSAKILTLDLETIKALTXX 875
            LQ      D           S      + +   + +M     SAK LTL +  I+ L+  
Sbjct: 272  LQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKV 331

Query: 874  XXXXXXXXXPFYNLKYVKVPPECIESCISARLKLYLL 764
                     PF NLKY+K+  +  +  + A +  Y L
Sbjct: 332  PAALNKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFL 368


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