BLASTX nr result
ID: Bupleurum21_contig00017142
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00017142 (1550 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g... 66 3e-08 ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 61 9e-07 >ref|XP_002321943.1| f-box family protein [Populus trichocarpa] gi|222868939|gb|EEF06070.1| f-box family protein [Populus trichocarpa] Length = 360 Score = 65.9 bits (159), Expect = 3e-08 Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 8/231 (3%) Frame = -2 Query: 1405 FELPNS-ITLPALTNLHLKNCKIPQKFWNLPNLFSLTLDNVQF--PKDLSDFFPALVNLR 1235 F LP + +T +L L L + LPNL SL+L + F P D D F + + L+ Sbjct: 134 FSLPPAFLTCQSLKTLQLSGFNFKALGFALPNLISLSLSHCSFTNPSDFDDPFASCLKLK 193 Query: 1234 NLTL----FFQTKIVQDFFIKCPQLVNLEINTSMTITISPSV-KIIVLAPKIRNFSSDGF 1070 NL+L F +K+++ I QL+NLEI + ++ + +I + APK+ +F Sbjct: 194 NLSLRSCSFLSSKVLK---ISGLQLLNLEIVGLGYMNLAGLLYRIDIFAPKLISFVYKLS 250 Query: 1069 FPITFGDSELENVNIKLQENIRYKDSAPSNKLKNYYRQVEQMFVGLGSAKILTLDLETIK 890 + F L ++NI R +K K Y + MF GLG+A+ + L +TI+ Sbjct: 251 HVVDFSGLHLPSLNI-----ARVHVCTKQDKKKEAYLGLINMFKGLGNAQSVMLHSQTIE 305 Query: 889 ALTXXXXXXXXXXXPFYNLKYVKVPPECIESCISARLKLYLLGCCPEATIV 737 L PF LK ++V P + + + YLLG P A + Sbjct: 306 VLGSFPGLLEQEPSPFKRLKSLQVAPN-NKPFVPPHVMTYLLGGTPLAETI 355 >ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1| predicted protein [Populus trichocarpa] Length = 378 Score = 60.8 bits (146), Expect = 9e-07 Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 18/277 (6%) Frame = -2 Query: 1540 LESDCWDLPVLTNLHWSWSYYRKFHKLPESYLIC--LPSLQTLFLDGFELPNSITLPALT 1367 +++ C D+P++ LP + C L SL+ G LP S+ LP+L Sbjct: 130 IDTACRDVPIV---------------LPRCFFNCESLRSLKLRIDGGIALPKSLGLPSLK 174 Query: 1366 NLHLKNCK--IPQKFWNLPNLFSLTLDNVQFPKDLSDFFPALVNLRNLTLFFQTKIVQDF 1193 LHL + + F + PNL +LT++++ +++F Sbjct: 175 TLHLGGAQNFDGKIFSSCPNLENLTIEDICL-----------------------NTIENF 211 Query: 1192 FIKCPQLVNLEINTSMTITISPSVKIIVLAPKIRNFSSDGFFPITFGD---SELENVNIK 1022 I L +LEI I K+++ APK+ +F DG P+ + + + L++VN+ Sbjct: 212 NIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNVV 271 Query: 1021 LQENIRYKD-----------SAPSNKLKNYYRQVEQMFVGLGSAKILTLDLETIKALTXX 875 LQ D S + + + +M SAK LTL + I+ L+ Sbjct: 272 LQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKV 331 Query: 874 XXXXXXXXXPFYNLKYVKVPPECIESCISARLKLYLL 764 PF NLKY+K+ + + + A + Y L Sbjct: 332 PAALNKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFL 368