BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017125
         (1860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi...   624   e-176
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1...   620   e-175
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...   606   e-171
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...   580   e-163
ref|XP_002886593.1| pentatricopeptide repeat-containing protein ...   572   e-160

>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
            [Vitis vinifera]
          Length = 489

 Score =  624 bits (1608), Expect = e-176
 Identities = 316/471 (67%), Positives = 362/471 (76%)
 Frame = -3

Query: 1771 HLEEALYKRLFKDGSSEISVRQQLNLFLKSKKRVYKWEVDDTLKILRSRNRFYPALKLSD 1592
            +LEEALY RLFKDGSSE+SVRQQLN FLKS KRV+KWEV DT+K LR R RFYPALKLS+
Sbjct: 19   YLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSE 78

Query: 1591 SMAERGFNKTVSDQAIHLDLVAKSRGISAAENYFVGLSETSKNHLTYGALLNCYCKESMT 1412
            +MA+RG N T+SDQAI+LDL+ K+RG++AAENYF+ L ETSKNHLTYGALLNCYCKE +T
Sbjct: 79   TMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLT 138

Query: 1411 XXXXXXXXXXXXLNLGLTAMPYNSLMTLYTKTGQPERIPAIIQEMKSSDIMPDSFTYNVW 1232
                        L LGL++MPYNSLMTLYTK GQPE+IP IIQE+KS DIMPDS+TYN+W
Sbjct: 139  EKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIW 198

Query: 1231 MRALAAVNDISGVERVMNEMKRDGRVAADWTTYSNLASIYVDAGQHXXXXXXXXXXXXXX 1052
            MRALAAVNDISGVERV+ EMKRDGRVA+DWTTYSNLASIYVDAG                
Sbjct: 199  MRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRN 258

Query: 1051 ACKDMLPFQYLITLYGRTGNLLEVYRVWRSLRLAFPKTSNVSYLNMIQVLVKLKDIQGAE 872
            AC+D+  FQ+LITLYGR GNLLEVYRVWRSLRLAFPKT+NVSYLNMIQVLV LKD+ GAE
Sbjct: 259  ACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAE 318

Query: 871  KCFSEWLSNCSTYDIRIANALIGAYVXXXXXXXXXXXXXXXXXXXXKPNAKTWEIFLNFY 692
            KCF EW S CS YDIR+ANALIGAY                     KPNAKTWEIFL ++
Sbjct: 319  KCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYH 378

Query: 691  LKEGDFKSAVDCVEKAISIGRGDGRKWVPPADIIQRLMGHFEQNKDVESAESFVDTLKKA 512
            LK  + K AVDCV  AIS GRGDG+KWVP  +II   M HFEQ KDV+ AE F++ LK  
Sbjct: 379  LKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILKST 438

Query: 511  VDDVGADVFESLIRTYVAAEKKSPTIRRRIKMENVDLSVEGIKLLDAASSE 359
            V+D+G +VFESLIR Y AA + SP +RRR+KMENV++S    KLL+  S E
Sbjct: 439  VEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKKLLEEVSVE 489


>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
            unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
            predicted protein [Populus trichocarpa]
          Length = 490

 Score =  620 bits (1598), Expect = e-175
 Identities = 318/490 (64%), Positives = 367/490 (74%)
 Frame = -3

Query: 1828 MAFMHQFGXXXXXXXXXXKHLEEALYKRLFKDGSSEISVRQQLNLFLKSKKRVYKWEVDD 1649
            MA    +G          K+LEEALY RLFK+GSSE+SVRQQLN FLKS KRV+KWEV D
Sbjct: 1    MAMPQLYGRTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGD 60

Query: 1648 TLKILRSRNRFYPALKLSDSMAERGFNKTVSDQAIHLDLVAKSRGISAAENYFVGLSETS 1469
            T+K LRSRN +YPA+KLS++M+ RG NKTVSDQAIHLDLVAK+RGI AAENYF+ L ETS
Sbjct: 61   TIKKLRSRNLYYPAVKLSETMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETS 120

Query: 1468 KNHLTYGALLNCYCKESMTXXXXXXXXXXXXLNLGLTAMPYNSLMTLYTKTGQPERIPAI 1289
            KN  TYGALLNCYCKE MT            LNLGL++M YNSLMTLYTK GQPERIPAI
Sbjct: 121  KNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAI 180

Query: 1288 IQEMKSSDIMPDSFTYNVWMRALAAVNDISGVERVMNEMKRDGRVAADWTTYSNLASIYV 1109
            IQEMK+ ++MPDS+TYNVWMRALAAVNDISGVERV+ EMKRDGRVAA+WTTYSNLASIYV
Sbjct: 181  IQEMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYV 240

Query: 1108 DAGQHXXXXXXXXXXXXXXACKDMLPFQYLITLYGRTGNLLEVYRVWRSLRLAFPKTSNV 929
            DAG                A KD+  FQ+LITLYGRTG L+EVYR+WRSLRLAFPKT+N+
Sbjct: 241  DAGYFDKAEKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANI 300

Query: 928  SYLNMIQVLVKLKDIQGAEKCFSEWLSNCSTYDIRIANALIGAYVXXXXXXXXXXXXXXX 749
            SYLNMIQVLV LKD+ GAEKCF EW S CSTYDIR+AN +I AY                
Sbjct: 301  SYLNMIQVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERA 360

Query: 748  XXXXXKPNAKTWEIFLNFYLKEGDFKSAVDCVEKAISIGRGDGRKWVPPADIIQRLMGHF 569
                 KPN+KTWEIF ++YLK GD K  VDC+  A+S GRG+G+KWVP   I+  LM HF
Sbjct: 361  RRRGAKPNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHF 420

Query: 568  EQNKDVESAESFVDTLKKAVDDVGADVFESLIRTYVAAEKKSPTIRRRIKMENVDLSVEG 389
            EQ KDV+ AE  ++ LKKAVDDV  +VFESLIRTY AA +KS  +RRR+KMENV++S + 
Sbjct: 421  EQQKDVDGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDC 480

Query: 388  IKLLDAASSE 359
             KLL+A   E
Sbjct: 481  QKLLEAICVE 490


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score =  606 bits (1563), Expect = e-171
 Identities = 312/485 (64%), Positives = 357/485 (73%)
 Frame = -3

Query: 1828 MAFMHQFGXXXXXXXXXXKHLEEALYKRLFKDGSSEISVRQQLNLFLKSKKRVYKWEVDD 1649
            MA    FG          K+LEEALY RLFK+GSSE+ VR+QLN FLKS KRVYKWEV D
Sbjct: 1    MAMPQLFGRTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGD 60

Query: 1648 TLKILRSRNRFYPALKLSDSMAERGFNKTVSDQAIHLDLVAKSRGISAAENYFVGLSETS 1469
            TLK LRSR  +YPALKLS++M++RG NKTVSDQAIHLDLVAK+RGI AAE +F+ L ETS
Sbjct: 61   TLKKLRSRGLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETS 120

Query: 1468 KNHLTYGALLNCYCKESMTXXXXXXXXXXXXLNLGLTAMPYNSLMTLYTKTGQPERIPAI 1289
            KNHLTYGALLNCYC + MT            LNLGL++M YNSLMTLYTK GQPERIP I
Sbjct: 121  KNHLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGI 180

Query: 1288 IQEMKSSDIMPDSFTYNVWMRALAAVNDISGVERVMNEMKRDGRVAADWTTYSNLASIYV 1109
            IQEMKS  IMPDS+TYNVWMRALAAVNDISG ERV+ EMKRDGRVAADWTTYSNLASIYV
Sbjct: 181  IQEMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYV 240

Query: 1108 DAGQHXXXXXXXXXXXXXXACKDMLPFQYLITLYGRTGNLLEVYRVWRSLRLAFPKTSNV 929
            DA                   +D   FQ+LITLYGR GNL E+YR+WRSLRLAFPKTSN+
Sbjct: 241  DAQLFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNI 300

Query: 928  SYLNMIQVLVKLKDIQGAEKCFSEWLSNCSTYDIRIANALIGAYVXXXXXXXXXXXXXXX 749
            SYLNMIQVLV LKD+ GAEKCF EW SNCS YDIR+AN LI AY                
Sbjct: 301  SYLNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERA 360

Query: 748  XXXXXKPNAKTWEIFLNFYLKEGDFKSAVDCVEKAISIGRGDGRKWVPPADIIQRLMGHF 569
                 KPNAKTWEIF ++Y + GD K +V+C+  AIS GRGDG+KW+P  +++   M HF
Sbjct: 361  IGRGAKPNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHF 420

Query: 568  EQNKDVESAESFVDTLKKAVDDVGADVFESLIRTYVAAEKKSPTIRRRIKMENVDLSVEG 389
            EQ KDV+ AE F++ LKKA DDV A+VFESLIRTY AA + S  +RRR+KMENV++S  G
Sbjct: 421  EQQKDVDGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAG 480

Query: 388  IKLLD 374
             KLL+
Sbjct: 481  QKLLE 485


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Glycine max]
          Length = 490

 Score =  580 bits (1495), Expect = e-163
 Identities = 303/490 (61%), Positives = 361/490 (73%)
 Frame = -3

Query: 1828 MAFMHQFGXXXXXXXXXXKHLEEALYKRLFKDGSSEISVRQQLNLFLKSKKRVYKWEVDD 1649
            M+ M  +G          K+LEEALY +LFKDGSS++ VRQ LN F+KS+KRVYKWEV D
Sbjct: 1    MSIMQLYGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGD 60

Query: 1648 TLKILRSRNRFYPALKLSDSMAERGFNKTVSDQAIHLDLVAKSRGISAAENYFVGLSETS 1469
            TLK LR R  + PALKLS++MA+R   KTVSD AIHLDL+AK+RGI+AAENYFV L E S
Sbjct: 61   TLKKLRDRKLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPS 120

Query: 1468 KNHLTYGALLNCYCKESMTXXXXXXXXXXXXLNLGLTAMPYNSLMTLYTKTGQPERIPAI 1289
            KNHL YGALLNCYCKE MT            L+L L++MPYNSLMTLYTK GQPE+IP++
Sbjct: 121  KNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSL 180

Query: 1288 IQEMKSSDIMPDSFTYNVWMRALAAVNDISGVERVMNEMKRDGRVAADWTTYSNLASIYV 1109
            IQEMK+S++M DS+TYNVWMRALAAVNDISGVERV +EMKR G+V  DWTTYSNLASI+V
Sbjct: 181  IQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFV 240

Query: 1108 DAGQHXXXXXXXXXXXXXXACKDMLPFQYLITLYGRTGNLLEVYRVWRSLRLAFPKTSNV 929
            DAG                A KD+  +Q+LITLYGRTGNL EVYRVWRSLRLAFPKT+N+
Sbjct: 241  DAGLFDKAEVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANI 300

Query: 928  SYLNMIQVLVKLKDIQGAEKCFSEWLSNCSTYDIRIANALIGAYVXXXXXXXXXXXXXXX 749
            SYLNMIQVLV LKD+ GAEKCF EW   C TYDIR+AN LI AYV               
Sbjct: 301  SYLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERA 360

Query: 748  XXXXXKPNAKTWEIFLNFYLKEGDFKSAVDCVEKAISIGRGDGRKWVPPADIIQRLMGHF 569
                 KPNAKT EIF+++YL +GDFK AVD + +AIS+GRG+G KWVP + II  +M HF
Sbjct: 361  RRRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHF 420

Query: 568  EQNKDVESAESFVDTLKKAVDDVGADVFESLIRTYVAAEKKSPTIRRRIKMENVDLSVEG 389
            EQ KDV+ AE F++ LKK+V+  G +VFESLIRTY AA + S  ++RR+KMENV++S   
Sbjct: 421  EQEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGT 480

Query: 388  IKLLDAASSE 359
             KLL+A S E
Sbjct: 481  QKLLEAISVE 490


>ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332434|gb|EFH62852.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 491

 Score =  572 bits (1474), Expect = e-160
 Identities = 284/471 (60%), Positives = 343/471 (72%)
 Frame = -3

Query: 1771 HLEEALYKRLFKDGSSEISVRQQLNLFLKSKKRVYKWEVDDTLKILRSRNRFYPALKLSD 1592
            ++EE LY RLFKDG +E+ VRQQLN FLK  K V+KWEV DT+K LR+R  +YPALKLS+
Sbjct: 20   YIEEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSE 79

Query: 1591 SMAERGFNKTVSDQAIHLDLVAKSRGISAAENYFVGLSETSKNHLTYGALLNCYCKESMT 1412
             M ERG NKTVSDQAIHLDLVAK+RGI+A ENYFV L ETSK  LTYG+LLNCYCKE +T
Sbjct: 80   VMEERGMNKTVSDQAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLT 139

Query: 1411 XXXXXXXXXXXXLNLGLTAMPYNSLMTLYTKTGQPERIPAIIQEMKSSDIMPDSFTYNVW 1232
                        LN+  ++M YNSLMTLYTKTGQ E++PA+IQE+K+ ++MPDS+TYNVW
Sbjct: 140  EKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVW 199

Query: 1231 MRALAAVNDISGVERVMNEMKRDGRVAADWTTYSNLASIYVDAGQHXXXXXXXXXXXXXX 1052
            MRALAA NDISGVERV+ EM RDGRVA DWTTYSN+ASIYVDAG                
Sbjct: 200  MRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKN 259

Query: 1051 ACKDMLPFQYLITLYGRTGNLLEVYRVWRSLRLAFPKTSNVSYLNMIQVLVKLKDIQGAE 872
              +D   +Q+LITLYGR G L EVYR+WRSLRLA PKTSNV+YLNMIQVLVKL D+ GAE
Sbjct: 260  TQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAE 319

Query: 871  KCFSEWLSNCSTYDIRIANALIGAYVXXXXXXXXXXXXXXXXXXXXKPNAKTWEIFLNFY 692
              F EW +NCSTYDIRI N LIGAY                     K NAKTWEIF+++Y
Sbjct: 320  TLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMDYY 379

Query: 691  LKEGDFKSAVDCVEKAISIGRGDGRKWVPPADIIQRLMGHFEQNKDVESAESFVDTLKKA 512
            +K GD   A++C+ KA+SIG+GDG KW+P  + ++ LM +FEQ KDV  AE+ ++ LK  
Sbjct: 380  VKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILKNG 439

Query: 511  VDDVGADVFESLIRTYVAAEKKSPTIRRRIKMENVDLSVEGIKLLDAASSE 359
             D++GA++FESLIRTY AA K  P +RRR+KMENV+++    KLLD  S E
Sbjct: 440  TDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEVTKKLLDEVSQE 490