BLASTX nr result

ID: Bupleurum21_contig00017107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017107
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22751.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002268024.1| PREDICTED: uncharacterized protein LOC100248...   142   2e-32
ref|NP_200041.1| Myosin heavy chain-related protein [Arabidopsis...   136   2e-30
ref|XP_003638363.1| Hyaluronan mediated motility receptor-like p...   134   8e-30
ref|XP_004148354.1| PREDICTED: uncharacterized protein LOC101208...   131   6e-29

>emb|CBI22751.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/100 (66%), Positives = 85/100 (85%)
 Frame = -3

Query: 304 MFKSSRWKSDKLKIKAVFELQFQATQVPKLKGKKKVMISIVPESVGKPTVKLPKSAIDEG 125
           MFKS+RW+S+K+KIKAVF+LQFQATQVP+ +G   +MIS++PE VGKPTV+L K+A+ EG
Sbjct: 1   MFKSARWRSEKIKIKAVFKLQFQATQVPESRGNL-LMISLIPEDVGKPTVRLEKAAVREG 59

Query: 124 ACLWEAPVYETIKLIKDSKTGIYKENVYHFILSTGSSKSG 5
            C WE P+YET+KLIK+ KTGI  E +Y FI+STGSSK+G
Sbjct: 60  TCTWENPIYETVKLIKEKKTGIIHEKIYRFIVSTGSSKTG 99


>ref|XP_002268024.1| PREDICTED: uncharacterized protein LOC100248827 [Vitis vinifera]
          Length = 1003

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/100 (66%), Positives = 85/100 (85%)
 Frame = -3

Query: 304 MFKSSRWKSDKLKIKAVFELQFQATQVPKLKGKKKVMISIVPESVGKPTVKLPKSAIDEG 125
           MFKS+RW+S+K+KIKAVF+LQFQATQVP+ +G   +MIS++PE VGKPTV+L K+A+ EG
Sbjct: 1   MFKSARWRSEKIKIKAVFKLQFQATQVPESRGNL-LMISLIPEDVGKPTVRLEKAAVREG 59

Query: 124 ACLWEAPVYETIKLIKDSKTGIYKENVYHFILSTGSSKSG 5
            C WE P+YET+KLIK+ KTGI  E +Y FI+STGSSK+G
Sbjct: 60  TCTWENPIYETVKLIKEKKTGIIHEKIYRFIVSTGSSKTG 99


>ref|NP_200041.1| Myosin heavy chain-related protein [Arabidopsis thaliana]
           gi|10177394|dbj|BAB10525.1| hyaluronan mediated motility
           receptor-like protein [Arabidopsis thaliana]
           gi|47550677|gb|AAT35237.1| At5g52280 [Arabidopsis
           thaliana] gi|51970830|dbj|BAD44107.1| hyaluronan
           mediated motility receptor-like protein [Arabidopsis
           thaliana] gi|332008812|gb|AED96195.1| Myosin heavy
           chain-related protein [Arabidopsis thaliana]
          Length = 853

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/101 (65%), Positives = 83/101 (82%)
 Frame = -3

Query: 304 MFKSSRWKSDKLKIKAVFELQFQATQVPKLKGKKKVMISIVPESVGKPTVKLPKSAIDEG 125
           MFKS  W++DK KIKAVF+LQFQATQVPKLK K  +MIS+VP+ VGKPT KL KS + EG
Sbjct: 1   MFKS--WRNDKNKIKAVFKLQFQATQVPKLK-KTALMISLVPDDVGKPTFKLEKSEVKEG 57

Query: 124 ACLWEAPVYETIKLIKDSKTGIYKENVYHFILSTGSSKSGY 2
            C WE P+Y ++KLIK+ KTGI +E +YHF+++TGSSKSG+
Sbjct: 58  ICSWENPIYVSVKLIKEPKTGIVREKIYHFVVATGSSKSGF 98


>ref|XP_003638363.1| Hyaluronan mediated motility receptor-like protein [Medicago
           truncatula] gi|355504298|gb|AES85501.1| Hyaluronan
           mediated motility receptor-like protein [Medicago
           truncatula]
          Length = 839

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/101 (64%), Positives = 85/101 (84%)
 Frame = -3

Query: 304 MFKSSRWKSDKLKIKAVFELQFQATQVPKLKGKKKVMISIVPESVGKPTVKLPKSAIDEG 125
           MFKS  W S K KIKAVF+L+FQATQVPK+K K  +M+S+VP+ VGKPTVKL K+A+ +G
Sbjct: 1   MFKS--W-SKKNKIKAVFKLEFQATQVPKMK-KNALMVSLVPDDVGKPTVKLEKTAVQDG 56

Query: 124 ACLWEAPVYETIKLIKDSKTGIYKENVYHFILSTGSSKSGY 2
            CLWE P++E++KL++DSK+GI  E +YHFI++TGSSKSGY
Sbjct: 57  TCLWENPIFESVKLVRDSKSGILHEKIYHFIVATGSSKSGY 97


>ref|XP_004148354.1| PREDICTED: uncharacterized protein LOC101208579 [Cucumis sativus]
           gi|449505214|ref|XP_004162407.1| PREDICTED:
           uncharacterized LOC101208579 [Cucumis sativus]
          Length = 1025

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/101 (65%), Positives = 81/101 (80%)
 Frame = -3

Query: 304 MFKSSRWKSDKLKIKAVFELQFQATQVPKLKGKKKVMISIVPESVGKPTVKLPKSAIDEG 125
           MFKS  W   K KIKAVF+LQFQATQVPKLK K  +MIS+VP+ VGKPTVKL K+AI +G
Sbjct: 1   MFKS--WNK-KQKIKAVFKLQFQATQVPKLK-KPALMISLVPDDVGKPTVKLEKAAIQDG 56

Query: 124 ACLWEAPVYETIKLIKDSKTGIYKENVYHFILSTGSSKSGY 2
            C WE PVYET+KL+++ KTG   E +YHF+++TGSSKSG+
Sbjct: 57  TCFWENPVYETVKLVREIKTGKINEKIYHFVVATGSSKSGF 97


Top