BLASTX nr result

ID: Bupleurum21_contig00017105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017105
         (2141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV85946.1| serine-rich repeat protein 2 [Streptococcus agala...    61   1e-06
ref|XP_002533446.1| hypothetical protein RCOM_0656430 [Ricinus c...    59   5e-06

>gb|AAV85946.1| serine-rich repeat protein 2 [Streptococcus agalactiae]
          Length = 1205

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 100/432 (23%), Positives = 181/432 (41%), Gaps = 24/432 (5%)
 Frame = +1

Query: 412  NCDEVMDLQSTRKSVGLSGNREMDMQKKDPTRADVSFANNMAWATVSLVQNMRSQSNQET 591
            N + V   +S   S  +S +  +   +   T   VS + +++  +   V N  S S+ E+
Sbjct: 788  NSESVSSSESVSNSESISSSESVSNSESISTSESVSTSESIS--SSESVSNSESISSSES 845

Query: 592  DLRRIRKSLRLSGMNRESNLDSNTSCTEEVINSRTEYQEKGTNILCPVELVDISQGHNGC 771
                +  S  +S     SN +S +S +E V NS +         +   E V  S+  +  
Sbjct: 846  ----VSNSESISSSESVSNSESISS-SESVSNSES---------ISSSESVSSSESVSSS 891

Query: 772  AKSVVQMDVKNIRKSPRLSAMKRQLNLESSSRRTVILGVASQKRGHNGNNISLPIEVNST 951
                    V N        ++    ++ SS   +    ++S +   N  +IS    V+S+
Sbjct: 892  ESISTSESVSNSESISSSESVSNSESISSSESVSNSESISSSESVSNSESISSSESVSSS 951

Query: 952  SVCPSQKAVAKSDENEINLGAKSDSEGFDGSIMSLPIEVELTSEPSSQDKFAKADENLLE 1131
                S ++V+ S E+  N  + S SE    S      E   TSE  S  +     E++  
Sbjct: 952  ESISSSESVSSS-ESVSNSESISSSESVSNSESISSSESVSTSESISSSESVSNSESISS 1010

Query: 1132 KASVS---------PLNLSKSIARFEYYVSSEKGINLIVDLNSSPAEWINKKTLSSSETL 1284
              SVS          ++ S+S++  E  +SS K ++    ++SS +   N +++SSSE++
Sbjct: 1011 SESVSSSESVSSSESISTSESVSNSE-CISSSKSVSNSESISSSESV-SNSESISSSESV 1068

Query: 1285 HQKKFDSFRQEI---ESLRSKKMIS-SFTYAPNTFNNSSPNHLQYDALPKSVSLECCPLQ 1452
               +  S  + +   ES+ S + +S S +   +   +SS +    +++  S S+     +
Sbjct: 1069 SNSESISSSESVSSSESISSSESVSNSESILSSESVSSSESISSSESISSSESVSMSTTE 1128

Query: 1453 SYPPERGNGSSDI---TETSSC--------IASTGDGHPDNSSKVNVETAGDYRASSEEL 1599
            S      +G S+I   TE+SS         I S  +   +   +V  ET GD  AS+  L
Sbjct: 1129 SLSESEVSGDSEISSSTESSSQSESMNHTEIKSDSESQHEVKHQVLPET-GDNSASALGL 1187

Query: 1600 LGTGISDSGTKA 1635
            LG G+    TK+
Sbjct: 1188 LGAGLLLGATKS 1199


>ref|XP_002533446.1| hypothetical protein RCOM_0656430 [Ricinus communis]
            gi|223526708|gb|EEF28942.1| hypothetical protein
            RCOM_0656430 [Ricinus communis]
          Length = 404

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
 Frame = +1

Query: 1129 EKASVSPLNLSKSIARFEYYVSSEKGINLIVDLNSSPAEWINK--KTLSSSETLHQKKFD 1302
            E  S +    +K  A FE+YV+SE+GI L VDLNSSP++WI K    +S    +   K  
Sbjct: 59   ENISSAIRTYTKVPASFEFYVNSEEGIKLCVDLNSSPSDWIKKYNNQISLCNNVGNAKSQ 118

Query: 1303 SFRQEIESLR--SKKMISSFTYA--PNTFNNSSPNHLQYDALPKSVSLECCPLQSYPPER 1470
            S  QE+  +   +K+M SS T +  P   N+   +H+Q +  P S +LE   +    P  
Sbjct: 119  SLHQELGRIEESNKQMRSSITASVDPGQIND---DHIQAELSP-SFNLEKNNIGIDLPNG 174

Query: 1471 GNGSSDITETSSCIASTGDG 1530
            GN SS  +    C     +G
Sbjct: 175  GNKSSVPSPARLCSVVHAEG 194


Top