BLASTX nr result

ID: Bupleurum21_contig00017097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017097
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF42954.1|AF237958_1 CEL I mismatch endonuclease [Apium grav...   550   e-154
gb|AFC88011.1| PARS I endonuclease [Petroselinum crispum]             548   e-154
dbj|BAA28948.1| endonuclease [Zinnia elegans]                         490   e-136
dbj|BAL03523.1| endonuclease 1 [Solanum lycopersicum]                 489   e-136
ref|NP_001234227.1| endonuclease precursor-like precursor [Solan...   489   e-136

>gb|AAF42954.1|AF237958_1 CEL I mismatch endonuclease [Apium graveolens]
          Length = 296

 Score =  550 bits (1418), Expect = e-154
 Identities = 258/297 (86%), Positives = 278/297 (93%)
 Frame = -2

Query: 998 MSQLCVMFFLVVALFYEPAVKAWSKEGHVMTCQIAQDLLEPKAAHAVKMLLPDYANGNLS 819
           M++L  +FFL++AL  EP V+AWSKEGHVMTCQIAQDLLEP+AAHAVKMLLPDYANGNLS
Sbjct: 1   MTRLYSVFFLLLALVVEPGVRAWSKEGHVMTCQIAQDLLEPEAAHAVKMLLPDYANGNLS 60

Query: 818 SLCVWPDQIRHWYKYRWTSSLHFIDTPDKACSFDYQRDCHDPNGEKDMCVAGAIQNFTSQ 639
           SLCVWPDQIRHWYKYRWTSSLHFIDTPD+ACSFDYQRDCHDP+G KDMCVAGAIQNFTSQ
Sbjct: 61  SLCVWPDQIRHWYKYRWTSSLHFIDTPDQACSFDYQRDCHDPHGGKDMCVAGAIQNFTSQ 120

Query: 638 LAHIHHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDLGGNSIDLRWFRHKSNLHHV 459
           L H  HGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSD+GGNSIDLRWFRHKSNLHHV
Sbjct: 121 LGHFRHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDMGGNSIDLRWFRHKSNLHHV 180

Query: 458 WDREIILTAAADFYGKDMNSLRQEIQMNFTEGSWSREVESWKDCDDIYTCVNQYAQESIK 279
           WDREIILTAAAD++GKDM+SL Q+IQ NFTEGSW ++VESWK+CDDI TC N+YA+ESIK
Sbjct: 181 WDREIILTAAADYHGKDMHSLLQDIQRNFTEGSWLQDVESWKECDDISTCANKYAKESIK 240

Query: 278 LACKWGYKGVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNQVFGSSTDDHSLA 108
           LAC WGYK VESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILN+V GSS  DHSLA
Sbjct: 241 LACNWGYKDVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNRVLGSSA-DHSLA 296


>gb|AFC88011.1| PARS I endonuclease [Petroselinum crispum]
          Length = 296

 Score =  548 bits (1412), Expect = e-154
 Identities = 257/297 (86%), Positives = 277/297 (93%)
 Frame = -2

Query: 998 MSQLCVMFFLVVALFYEPAVKAWSKEGHVMTCQIAQDLLEPKAAHAVKMLLPDYANGNLS 819
           M++L  +FFL++AL  EP V+AWSKEGHVMTCQIAQDLLEP+AAHAVKMLLPDYANGNLS
Sbjct: 1   MTRLYSVFFLLLALVVEPGVRAWSKEGHVMTCQIAQDLLEPEAAHAVKMLLPDYANGNLS 60

Query: 818 SLCVWPDQIRHWYKYRWTSSLHFIDTPDKACSFDYQRDCHDPNGEKDMCVAGAIQNFTSQ 639
           SLCVWPDQIRHWYKYRWTSSLHFIDTPD+ACSFDYQRDCHDP+G +DMCVAGAIQNFTSQ
Sbjct: 61  SLCVWPDQIRHWYKYRWTSSLHFIDTPDQACSFDYQRDCHDPHGGEDMCVAGAIQNFTSQ 120

Query: 638 LAHIHHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDLGGNSIDLRWFRHKSNLHHV 459
           L H  HGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSD+GGNSIDLRWFRHKSNLHHV
Sbjct: 121 LGHFRHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDMGGNSIDLRWFRHKSNLHHV 180

Query: 458 WDREIILTAAADFYGKDMNSLRQEIQMNFTEGSWSREVESWKDCDDIYTCVNQYAQESIK 279
           WDREIILTAAAD++GKDM+SL Q+IQ NFTEGSW + VESWK+CDDI TC N+YA+ESIK
Sbjct: 181 WDREIILTAAADYHGKDMHSLLQDIQRNFTEGSWLQHVESWKECDDISTCANKYAKESIK 240

Query: 278 LACKWGYKGVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNQVFGSSTDDHSLA 108
           LAC WGYK VESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILN+V GSS  DHSLA
Sbjct: 241 LACNWGYKDVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNRVLGSSA-DHSLA 296


>dbj|BAA28948.1| endonuclease [Zinnia elegans]
          Length = 303

 Score =  490 bits (1262), Expect = e-136
 Identities = 229/296 (77%), Positives = 258/296 (87%), Gaps = 1/296 (0%)
 Frame = -2

Query: 986 CVMFFLVVALFYEPAVKAWSKEGHVMTCQIAQDLLEPKAAHAVKMLLPDYANGNLSSLCV 807
           C+ FF++       AV+AWSKEGHVMTCQIAQ+LL P AAHAV+MLLPDY  GNLS+LCV
Sbjct: 11  CLGFFMINNY---NAVQAWSKEGHVMTCQIAQELLSPDAAHAVQMLLPDYVKGNLSALCV 67

Query: 806 WPDQIRHWYKYRWTSSLHFIDTPDKACSFDYQRDCHDPNGEKDMCVAGAIQNFTSQLAHI 627
           WPDQIRHWY+YRWTS LHFIDTPD ACSFDY RDCHD NG  DMCVAGAI+NFTSQL+H 
Sbjct: 68  WPDQIRHWYRYRWTSPLHFIDTPDDACSFDYTRDCHDSNGMVDMCVAGAIKNFTSQLSHY 127

Query: 626 HHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDLGGNSIDLRWFRHKSNLHHVWDRE 447
            HGTSDRRYNMTEALLF+SHFMGDIHQPMHVGFT+D GGN+IDLRWFRHKSNLHHVWDRE
Sbjct: 128 QHGTSDRRYNMTEALLFVSHFMGDIHQPMHVGFTTDEGGNTIDLRWFRHKSNLHHVWDRE 187

Query: 446 IILTAAADFYGKDMNSLRQEIQMNFTEGSWSREVESWKDCDDIYTCVNQYAQESIKLACK 267
           IILTAA++ Y KDM SL++ IQ NFT G WS +V SWKDCDDI  CVN+YA+ESI LACK
Sbjct: 188 IILTAASELYDKDMESLQKAIQANFTHGLWSDDVNSWKDCDDISNCVNKYAKESIALACK 247

Query: 266 WGYKGVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNQVFGSSTD-DHSLAPT 102
           WGY+GVE+GETLSD YF++RMPIVMKRIAQGG+RLSMILN+VFGSS+  + +L PT
Sbjct: 248 WGYEGVEAGETLSDDYFDSRMPIVMKRIAQGGVRLSMILNRVFGSSSSLEDALVPT 303


>dbj|BAL03523.1| endonuclease 1 [Solanum lycopersicum]
          Length = 302

 Score =  489 bits (1260), Expect = e-136
 Identities = 218/302 (72%), Positives = 263/302 (87%)
 Frame = -2

Query: 1007 LCKMSQLCVMFFLVVALFYEPAVKAWSKEGHVMTCQIAQDLLEPKAAHAVKMLLPDYANG 828
            + +++ L  +FFL VA   +  V+AWSKEGHVMTC+IAQ LL  +AAHAVKMLLP+Y NG
Sbjct: 1    MLRLTSLSSIFFLCVAFINQHGVEAWSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNG 60

Query: 827  NLSSLCVWPDQIRHWYKYRWTSSLHFIDTPDKACSFDYQRDCHDPNGEKDMCVAGAIQNF 648
            +LS+LCVWPDQ+RHWYKY+WTS LHFIDTPDKAC+FDY+RDCHD +G KDMCVAGAIQNF
Sbjct: 61   DLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNF 120

Query: 647  TSQLAHIHHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDLGGNSIDLRWFRHKSNL 468
            T+QL+H   GTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSD GGNSIDLRWFRHKSNL
Sbjct: 121  TTQLSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNL 180

Query: 467  HHVWDREIILTAAADFYGKDMNSLRQEIQMNFTEGSWSREVESWKDCDDIYTCVNQYAQE 288
            HHVWDREIILTAA D+Y KD+N L ++I+ NFT+G WS ++ SW++C ++++CVN++A E
Sbjct: 181  HHVWDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATE 240

Query: 287  SIKLACKWGYKGVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNQVFGSSTDDHSLA 108
            SI +ACKWGYKGVE+GETLSD YFN+R+PIVMKR+AQGGIRL+M+LN VFG+S  + S+ 
Sbjct: 241  SINIACKWGYKGVEAGETLSDDYFNSRLPIVMKRVAQGGIRLAMLLNNVFGASQQEDSVV 300

Query: 107  PT 102
             T
Sbjct: 301  AT 302


>ref|NP_001234227.1| endonuclease precursor-like precursor [Solanum lycopersicum]
            gi|114144725|emb|CAJ87709.1| putative endonuclease
            precursor [Solanum lycopersicum]
          Length = 302

 Score =  489 bits (1258), Expect = e-136
 Identities = 218/302 (72%), Positives = 263/302 (87%)
 Frame = -2

Query: 1007 LCKMSQLCVMFFLVVALFYEPAVKAWSKEGHVMTCQIAQDLLEPKAAHAVKMLLPDYANG 828
            + +++ L  +FFL VA   +  V+AWSKEGHVMTC+IAQ LL  +AAHAVKMLLP+Y NG
Sbjct: 1    MLRLTLLSSIFFLCVAFINQHGVEAWSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNG 60

Query: 827  NLSSLCVWPDQIRHWYKYRWTSSLHFIDTPDKACSFDYQRDCHDPNGEKDMCVAGAIQNF 648
            +LS+LCVWPDQ+RHWYKY+WTS LHFIDTPDKAC+FDY+RDCHD +G KDMCVAGAIQNF
Sbjct: 61   DLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNF 120

Query: 647  TSQLAHIHHGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDLGGNSIDLRWFRHKSNL 468
            T+QL+H   GTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSD GGNSIDLRWFRHKSNL
Sbjct: 121  TTQLSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNL 180

Query: 467  HHVWDREIILTAAADFYGKDMNSLRQEIQMNFTEGSWSREVESWKDCDDIYTCVNQYAQE 288
            HHVWDREIILTAA D+Y KD+N L ++I+ NFT+G WS ++ SW++C ++++CVN++A E
Sbjct: 181  HHVWDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATE 240

Query: 287  SIKLACKWGYKGVESGETLSDKYFNTRMPIVMKRIAQGGIRLSMILNQVFGSSTDDHSLA 108
            SI +ACKWGYKGVE+GETLSD YFN+R+PIVMKR+AQGGIRL+M+LN VFG+S  + S+ 
Sbjct: 241  SINIACKWGYKGVEAGETLSDDYFNSRLPIVMKRVAQGGIRLAMLLNNVFGASQQEDSVV 300

Query: 107  PT 102
             T
Sbjct: 301  AT 302


Top