BLASTX nr result

ID: Bupleurum21_contig00017076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017076
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115
ref|XP_002300805.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   417   e-114
ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit...   415   e-114
ref|XP_003597927.1| NADH-ubiquinone oxidoreductase 24 kDa subuni...   409   e-112

>ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|222857073|gb|EEE94620.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  420 bits (1080), Expect = e-115
 Identities = 206/254 (81%), Positives = 216/254 (85%)
 Frame = +3

Query: 207 MLRRLATQRLVEIRQAFSLVPQTSRSFSTALNYHIDTPDNTTELPWEFSTKNKEKVKEIL 386
           ML R+   RL+EIRQ+  L PQ SRS STALNYHIDT DN  +LPWEFS  NKEKVKEI+
Sbjct: 1   MLARIVATRLLEIRQSLRLTPQASRSLSTALNYHIDTADNNPDLPWEFSASNKEKVKEIV 60

Query: 387 SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAK 566
           SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNR+ 
Sbjct: 61  SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRSP 120

Query: 567 VGKYHLLVCGTTPCMIRGSRDIEAALLKHLGVKRNEVTKDGLFSVGEMECMGSCVNAPMI 746
           VGKYHLLVCGTTPCMIRGSR+IE ALLKHLGVKRNEVTKDGLFSVGEMECMG CVNAPMI
Sbjct: 121 VGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMI 180

Query: 747 TVADYSNGSEAYTYDYYEDVTPQRVVEIVEAFRKGEKPPRGTQNAKRINSXXXXXXXXXX 926
           TVADYSNGSE YTY+YYEDVTP+RVVEIVE  RKGEKPP GTQN KRI            
Sbjct: 181 TVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRKGEKPPHGTQNPKRIKCGPEGGNTTLH 240

Query: 927 XXXKAPPCRDLDAC 968
              K PPCRDLD+C
Sbjct: 241 GEPKPPPCRDLDSC 254


>ref|XP_002300805.1| predicted protein [Populus trichocarpa] gi|222842531|gb|EEE80078.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  419 bits (1078), Expect = e-115
 Identities = 204/254 (80%), Positives = 218/254 (85%)
 Frame = +3

Query: 207 MLRRLATQRLVEIRQAFSLVPQTSRSFSTALNYHIDTPDNTTELPWEFSTKNKEKVKEIL 386
           ML RL  +RL+EIRQA  L PQ SRSFSTALNYH++TP+N  +LPWEF+  NKEKVKEI+
Sbjct: 1   MLARLGARRLLEIRQALRLTPQASRSFSTALNYHLNTPENNPDLPWEFTAANKEKVKEII 60

Query: 387 SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAK 566
           SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNR+ 
Sbjct: 61  SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRSP 120

Query: 567 VGKYHLLVCGTTPCMIRGSRDIEAALLKHLGVKRNEVTKDGLFSVGEMECMGSCVNAPMI 746
           VGKYHLLVCGTTPCMIRGSR+IE AL+KHLGVKRNEVTKDGLFSVGEMECMG CVNAPMI
Sbjct: 121 VGKYHLLVCGTTPCMIRGSREIEDALVKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMI 180

Query: 747 TVADYSNGSEAYTYDYYEDVTPQRVVEIVEAFRKGEKPPRGTQNAKRINSXXXXXXXXXX 926
           TVADYSNGSE YTY+YYEDVTP+RVVEIVE  RKGEKPP GTQN +R             
Sbjct: 181 TVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRKGEKPPHGTQNPQRTKCGPEGGNTTLH 240

Query: 927 XXXKAPPCRDLDAC 968
              K PPCRDLDAC
Sbjct: 241 GEPKPPPCRDLDAC 254


>ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
           mitochondrial [Vitis vinifera]
           gi|297735489|emb|CBI17929.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/254 (80%), Positives = 218/254 (85%)
 Frame = +3

Query: 207 MLRRLATQRLVEIRQAFSLVPQTSRSFSTALNYHIDTPDNTTELPWEFSTKNKEKVKEIL 386
           ML RLAT+RL+E+RQ F    QTSRSFSTALNYH+D+PDN   +PWEF+  NK KVKEIL
Sbjct: 1   MLARLATKRLLEVRQIFRQNHQTSRSFSTALNYHLDSPDNNPNIPWEFNDANKGKVKEIL 60

Query: 387 SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAK 566
           SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKV+EVAPIRVYEVATFYSMFNRAK
Sbjct: 61  SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVVEVAPIRVYEVATFYSMFNRAK 120

Query: 567 VGKYHLLVCGTTPCMIRGSRDIEAALLKHLGVKRNEVTKDGLFSVGEMECMGSCVNAPMI 746
           VGKYHLLVCGTTPCMIRGSR+IE ALLKHLGVKRNEVTKDGLFSVGEMECMG CVNAPMI
Sbjct: 121 VGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMI 180

Query: 747 TVADYSNGSEAYTYDYYEDVTPQRVVEIVEAFRKGEKPPRGTQNAKRINSXXXXXXXXXX 926
           TVADYS GSE YTY+YYEDVTP+RVVEIVE  R+GEKPP GTQN +R             
Sbjct: 181 TVADYSTGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKPPHGTQNPQRTRCGPEGGNTTLL 240

Query: 927 XXXKAPPCRDLDAC 968
              KAPPCRDLDAC
Sbjct: 241 GEPKAPPCRDLDAC 254


>ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit, putative [Ricinus
           communis] gi|223539814|gb|EEF41394.1| NADH-ubiquinone
           oxidoreductase 24 kD subunit, putative [Ricinus
           communis]
          Length = 255

 Score =  415 bits (1067), Expect = e-114
 Identities = 207/255 (81%), Positives = 217/255 (85%), Gaps = 1/255 (0%)
 Frame = +3

Query: 207 MLRRLATQRLVEIRQAFSLVPQT-SRSFSTALNYHIDTPDNTTELPWEFSTKNKEKVKEI 383
           ML RLA  RL EIRQ F    Q  SRSFSTALNYHID+PDN   +PWEFS KNKEKVKEI
Sbjct: 1   MLARLAATRLREIRQVFGQSSQQISRSFSTALNYHIDSPDNNPNIPWEFSEKNKEKVKEI 60

Query: 384 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRA 563
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKVIEVAPIRVYEVATFYSMFNR+
Sbjct: 61  ISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVIEVAPIRVYEVATFYSMFNRS 120

Query: 564 KVGKYHLLVCGTTPCMIRGSRDIEAALLKHLGVKRNEVTKDGLFSVGEMECMGSCVNAPM 743
            VGKYHLLVCGTTPCMIRGSR+IE ALLKHLGVKRNEVTKDGLFSVGEMECMG CVNAPM
Sbjct: 121 PVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 180

Query: 744 ITVADYSNGSEAYTYDYYEDVTPQRVVEIVEAFRKGEKPPRGTQNAKRINSXXXXXXXXX 923
           ITVADYSNGSE YTY+YYEDVTP+RVVEIV+  R+GEKPP GTQN KRI S         
Sbjct: 181 ITVADYSNGSEGYTYNYYEDVTPKRVVEIVDMLRRGEKPPHGTQNPKRIKSGPEGGNTTL 240

Query: 924 XXXXKAPPCRDLDAC 968
               K PPCRDLDAC
Sbjct: 241 NGEPKPPPCRDLDAC 255


>ref|XP_003597927.1| NADH-ubiquinone oxidoreductase 24 kDa subunit [Medicago truncatula]
           gi|355486975|gb|AES68178.1| NADH-ubiquinone
           oxidoreductase 24 kDa subunit [Medicago truncatula]
          Length = 251

 Score =  409 bits (1051), Expect = e-112
 Identities = 202/254 (79%), Positives = 215/254 (84%)
 Frame = +3

Query: 207 MLRRLATQRLVEIRQAFSLVPQTSRSFSTALNYHIDTPDNTTELPWEFSTKNKEKVKEIL 386
           ML RLA  RL +IRQ F    Q SR+FSTALNYH+D+PDN   LPWEF+  NK KVKEI+
Sbjct: 1   MLARLAANRLNQIRQTFH---QPSRAFSTALNYHLDSPDNNPNLPWEFNDANKAKVKEII 57

Query: 387 SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAK 566
           SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKVIEVAPIRVYEVATFYSMFNR+K
Sbjct: 58  SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVIEVAPIRVYEVATFYSMFNRSK 117

Query: 567 VGKYHLLVCGTTPCMIRGSRDIEAALLKHLGVKRNEVTKDGLFSVGEMECMGSCVNAPMI 746
           VGKYHLLVCGTTPCMIRGSR+IEAALLKHLGVKRNEVT+DG FSVGEMECMG CVNAPMI
Sbjct: 118 VGKYHLLVCGTTPCMIRGSREIEAALLKHLGVKRNEVTQDGFFSVGEMECMGCCVNAPMI 177

Query: 747 TVADYSNGSEAYTYDYYEDVTPQRVVEIVEAFRKGEKPPRGTQNAKRINSXXXXXXXXXX 926
           TVADYSNGSE YTY+YYEDVTP++VVEIVE  RKGEKPP GTQN  RI S          
Sbjct: 178 TVADYSNGSEGYTYNYYEDVTPEKVVEIVEKLRKGEKPPHGTQNPHRIRSAPEGGNTTLL 237

Query: 927 XXXKAPPCRDLDAC 968
              K PPCRDLDAC
Sbjct: 238 SEPKPPPCRDLDAC 251


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