BLASTX nr result

ID: Bupleurum21_contig00017071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017071
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631702.1| PREDICTED: uncharacterized protein LOC100256...   146   2e-33
emb|CBI25088.3| unnamed protein product [Vitis vinifera]              146   2e-33
emb|CAN78688.1| hypothetical protein VITISV_006073 [Vitis vinifera]   146   2e-33
ref|NP_179059.1| trichome birefringence-like 13 protein [Arabido...   133   1e-29
ref|XP_002883836.1| hypothetical protein ARALYDRAFT_480347 [Arab...   132   2e-29

>ref|XP_003631702.1| PREDICTED: uncharacterized protein LOC100256594 [Vitis vinifera]
          Length = 407

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/145 (52%), Positives = 90/145 (62%), Gaps = 14/145 (9%)
 Frame = +1

Query: 55  PILGNPFHK-------DFSIYTSFLLLSLICTATLFLGSSLFRTPCLSTRHQQ------- 192
           PI G+  H          S  TS L +SL+C A+LFL  SLF++      HQ        
Sbjct: 2   PIRGHSLHHAKKSASHSSSCSTSLLFISLLCLASLFLVYSLFKSSVSPHNHQNLQFKRSD 61

Query: 193 RSHAVIPTEAPCDYSDGKWIYDQTVRSPPRYDSTCKEIYKGWNCLGSNKSNAFDIVMWRW 372
            S   I  E PCDYSDG WIYD +VRS P YD TCKEI+KGWNC+ SNKSN  DI+ W W
Sbjct: 62  SSGTPILVE-PCDYSDGMWIYDPSVRSAP-YDHTCKEIFKGWNCIASNKSNGLDIIKWHW 119

Query: 373 KPKQCDLPQFDPLVFLQLYRNTNTG 447
           KPK CDLP+FDP+ FL+ +RNTN G
Sbjct: 120 KPKGCDLPRFDPVRFLERFRNTNVG 144


>emb|CBI25088.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/145 (52%), Positives = 90/145 (62%), Gaps = 14/145 (9%)
 Frame = +1

Query: 55  PILGNPFHK-------DFSIYTSFLLLSLICTATLFLGSSLFRTPCLSTRHQQ------- 192
           PI G+  H          S  TS L +SL+C A+LFL  SLF++      HQ        
Sbjct: 2   PIRGHSLHHAKKSASHSSSCSTSLLFISLLCLASLFLVYSLFKSSVSPHNHQNLQFKRSD 61

Query: 193 RSHAVIPTEAPCDYSDGKWIYDQTVRSPPRYDSTCKEIYKGWNCLGSNKSNAFDIVMWRW 372
            S   I  E PCDYSDG WIYD +VRS P YD TCKEI+KGWNC+ SNKSN  DI+ W W
Sbjct: 62  SSGTPILVE-PCDYSDGMWIYDPSVRSAP-YDHTCKEIFKGWNCIASNKSNGLDIIKWHW 119

Query: 373 KPKQCDLPQFDPLVFLQLYRNTNTG 447
           KPK CDLP+FDP+ FL+ +RNTN G
Sbjct: 120 KPKGCDLPRFDPVRFLERFRNTNVG 144


>emb|CAN78688.1| hypothetical protein VITISV_006073 [Vitis vinifera]
          Length = 422

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/145 (52%), Positives = 90/145 (62%), Gaps = 14/145 (9%)
 Frame = +1

Query: 55  PILGNPFHK-------DFSIYTSFLLLSLICTATLFLGSSLFRTPCLSTRHQQ------- 192
           PI G+  H          S  TS L +SL+C A+LFL  SLF++      HQ        
Sbjct: 2   PIRGHSLHHAKKSASHSSSCSTSLLFISLLCLASLFLVYSLFKSSVSPHNHQNLQFKRSD 61

Query: 193 RSHAVIPTEAPCDYSDGKWIYDQTVRSPPRYDSTCKEIYKGWNCLGSNKSNAFDIVMWRW 372
            S   I  E PCDYSDG WIYD +VRS P YD TCKEI+KGWNC+ SNKSN  DI+ W W
Sbjct: 62  SSGTPILVE-PCDYSDGMWIYDPSVRSAP-YDHTCKEIFKGWNCIASNKSNGLDIIKWHW 119

Query: 373 KPKQCDLPQFDPLVFLQLYRNTNTG 447
           KPK CDLP+FDP+ FL+ +RNTN G
Sbjct: 120 KPKGCDLPRFDPVRFLERFRNTNVG 144


>ref|NP_179059.1| trichome birefringence-like 13 protein [Arabidopsis thaliana]
           gi|4263820|gb|AAD15463.1| hypothetical protein
           [Arabidopsis thaliana] gi|18650652|gb|AAL75895.1|
           At2g14530/T13P21.9 [Arabidopsis thaliana]
           gi|21700859|gb|AAM70553.1| At2g14530/T13P21.9
           [Arabidopsis thaliana] gi|330251215|gb|AEC06309.1|
           trichome birefringence-like 13 protein [Arabidopsis
           thaliana]
          Length = 412

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/124 (53%), Positives = 81/124 (65%), Gaps = 9/124 (7%)
 Frame = +1

Query: 103 FLLLSLICTATLFLGSSLFRTPCLSTRHQQRSHAVIPTE---------APCDYSDGKWIY 255
           F LLSL+C  ++FL  SL +   LS+    RS  V P +         A CD+S+G WIY
Sbjct: 12  FPLLSLLCFISIFLLLSLSKRASLSSPKTHRSATVFPPKPDGSLSPLSATCDFSEGSWIY 71

Query: 256 DQTVRSPPRYDSTCKEIYKGWNCLGSNKSNAFDIVMWRWKPKQCDLPQFDPLVFLQLYRN 435
           D   RS  RY S+CKEI+KGWNC+ +NK+N F+I  WRWKPK CDLP FDPL FLQ +RN
Sbjct: 72  DPNPRST-RYTSSCKEIFKGWNCIRNNKTNGFEISNWRWKPKHCDLPSFDPLKFLQSHRN 130

Query: 436 TNTG 447
           TN G
Sbjct: 131 TNIG 134


>ref|XP_002883836.1| hypothetical protein ARALYDRAFT_480347 [Arabidopsis lyrata subsp.
           lyrata] gi|297329676|gb|EFH60095.1| hypothetical protein
           ARALYDRAFT_480347 [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score =  132 bits (333), Expect = 2e-29
 Identities = 66/124 (53%), Positives = 79/124 (63%), Gaps = 9/124 (7%)
 Frame = +1

Query: 103 FLLLSLICTATLFLGSSLFRTPCLSTRHQQRSHAVIPTE---------APCDYSDGKWIY 255
           F LLSL+C  ++FL  SL +   LS+    RS  V P +         A CD+SDG WIY
Sbjct: 12  FPLLSLLCFISIFLLLSLSKRASLSSLTTHRSATVFPPKSDGSLSPLSATCDFSDGSWIY 71

Query: 256 DQTVRSPPRYDSTCKEIYKGWNCLGSNKSNAFDIVMWRWKPKQCDLPQFDPLVFLQLYRN 435
           D   RS  RY S CKEI+KGWNC+ +NK+N  +I  WRWKPK CDLP FDPL FLQ +RN
Sbjct: 72  DPNPRST-RYTSNCKEIFKGWNCIRNNKTNGLEISKWRWKPKDCDLPSFDPLKFLQTHRN 130

Query: 436 TNTG 447
           TN G
Sbjct: 131 TNIG 134


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