BLASTX nr result
ID: Bupleurum21_contig00017065
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00017065 (288 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265... 77 1e-12 ref|XP_002519745.1| COR414-TM1, putative [Ricinus communis] gi|2... 77 2e-12 gb|AAG51739.1|AC068667_18 unknown protein; 31966-27882 [Arabidop... 76 3e-12 ref|NP_564327.1| cold regulated 314 thylakoid membrane 2 [Arabid... 76 3e-12 ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 >ref|XP_002273366.1| PREDICTED: uncharacterized protein LOC100265908 [Vitis vinifera] gi|297740634|emb|CBI30816.3| unnamed protein product [Vitis vinifera] Length = 210 Score = 77.4 bits (189), Expect = 1e-12 Identities = 37/62 (59%), Positives = 50/62 (80%) Frame = +3 Query: 102 MMRRKEGSGGAVCYANAGLSPRNLQWVATISSAVLMIAKGTPIQKSFLVPIFALQAPANI 281 +M++ GAVCY+ A L+P NLQWV T+SSAVLM+++GT QKSFLVP+FALQAP +I Sbjct: 48 VMKKNRRGFGAVCYS-APLTPPNLQWVCTVSSAVLMLSRGTAAQKSFLVPLFALQAPTSI 106 Query: 282 VT 287 ++ Sbjct: 107 IS 108 >ref|XP_002519745.1| COR414-TM1, putative [Ricinus communis] gi|223541162|gb|EEF42718.1| COR414-TM1, putative [Ricinus communis] Length = 223 Score = 76.6 bits (187), Expect = 2e-12 Identities = 40/80 (50%), Positives = 55/80 (68%) Frame = +3 Query: 48 FTPLRVSSVEDRRRGFMNMMRRKEGSGGAVCYANAGLSPRNLQWVATISSAVLMIAKGTP 227 F PLR + M + ++K GA+CYA LS NLQW++TISSA+LM+AKGT Sbjct: 44 FNPLRSFCINKGNNDRMTL-QKKVRRFGALCYAGP-LSTSNLQWISTISSAILMVAKGTA 101 Query: 228 IQKSFLVPIFALQAPANIVT 287 IQKSF+VP+ ALQAP+ +++ Sbjct: 102 IQKSFVVPLLALQAPSTVIS 121 >gb|AAG51739.1|AC068667_18 unknown protein; 31966-27882 [Arabidopsis thaliana] Length = 484 Score = 75.9 bits (185), Expect = 3e-12 Identities = 45/84 (53%), Positives = 54/84 (64%), Gaps = 4/84 (4%) Frame = +3 Query: 48 FTPLRVSSVEDRRR----GFMNMMRRKEGSGGAVCYANAGLSPRNLQWVATISSAVLMIA 215 F PLR+S+ DR+R RRK GS VCYA LS NLQW++TIS LM A Sbjct: 245 FNPLRLSA--DRQRTATVSARAEKRRKRGSS-VVCYATPMLSVHNLQWISTISCVALMFA 301 Query: 216 KGTPIQKSFLVPIFALQAPANIVT 287 +GT I KSF+VP+FALQAP IV+ Sbjct: 302 RGTGIHKSFVVPLFALQAPMGIVS 325 Score = 71.2 bits (173), Expect = 8e-11 Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 2/85 (2%) Frame = +3 Query: 36 TPTAFTPLRVSSVEDRRRGFMNMM--RRKEGSGGAVCYANAGLSPRNLQWVATISSAVLM 209 +P F PLR+S R + RRK GS VCYA A +S +LQW++TIS LM Sbjct: 40 SPVCFNPLRLSGDRQRTATVSTRVEKRRKRGSS-VVCYA-APISANSLQWISTISCLALM 97 Query: 210 IAKGTPIQKSFLVPIFALQAPANIV 284 +A+GT I KS +VP+FAL AP++IV Sbjct: 98 LARGTGIHKSVVVPLFALHAPSSIV 122 >ref|NP_564327.1| cold regulated 314 thylakoid membrane 2 [Arabidopsis thaliana] gi|426019472|sp|F4I1G5.1|CRIM2_ARATH RecName: Full=Cold-regulated 413 inner membrane protein 2, chloroplastic; Short=AtCOR413-IM2; AltName: Full=Cold-regulated 413 thylakoid membrane 2; Short=AtCOR413-TM2; Flags: Precursor gi|332192959|gb|AEE31080.1| cold regulated 314 thylakoid membrane 2 [Arabidopsis thaliana] Length = 226 Score = 75.9 bits (185), Expect = 3e-12 Identities = 45/84 (53%), Positives = 54/84 (64%), Gaps = 4/84 (4%) Frame = +3 Query: 48 FTPLRVSSVEDRRR----GFMNMMRRKEGSGGAVCYANAGLSPRNLQWVATISSAVLMIA 215 F PLR+S+ DR+R RRK GS VCYA LS NLQW++TIS LM A Sbjct: 44 FNPLRLSA--DRQRTATVSARAEKRRKRGSS-VVCYATPMLSVHNLQWISTISCVALMFA 100 Query: 216 KGTPIQKSFLVPIFALQAPANIVT 287 +GT I KSF+VP+FALQAP IV+ Sbjct: 101 RGTGIHKSFVVPLFALQAPMGIVS 124 >ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|222875388|gb|EEF12519.1| predicted protein [Populus trichocarpa] Length = 229 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/83 (48%), Positives = 59/83 (71%), Gaps = 1/83 (1%) Frame = +3 Query: 42 TAFTPLRVSSVEDRRRGFMNMMRRKEGSG-GAVCYANAGLSPRNLQWVATISSAVLMIAK 218 T F PLR+S + M + R++ G G GAVC+A + +P +L W++ +SSAVL++AK Sbjct: 48 TTFNPLRLSIKSNEM--MMKIKRKESGRGFGAVCHAGSLTTP-SLPWISALSSAVLVLAK 104 Query: 219 GTPIQKSFLVPIFALQAPANIVT 287 GT +QKSFLVP+FALQAP +++ Sbjct: 105 GTAVQKSFLVPLFALQAPPAVIS 127