BLASTX nr result

ID: Bupleurum21_contig00017027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017027
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138958.1| PREDICTED: 26S proteasome non-ATPase regulat...   128   4e-28
gb|AAP82172.1| 26S proteasome subunit RPN2A [synthetic construct]     128   4e-28
ref|NP_171973.1| 26S proteasome regulatory subunit N2 [Arabidops...   128   4e-28
ref|XP_002265758.2| PREDICTED: 26S proteasome non-ATPase regulat...   128   4e-28
ref|XP_003530934.1| PREDICTED: 26S proteasome non-ATPase regulat...   128   4e-28

>ref|XP_004138958.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like
           [Cucumis sativus] gi|449526720|ref|XP_004170361.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           1-like [Cucumis sativus]
          Length = 1002

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = +3

Query: 96  RSDFLILKTIKQSIEMKNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 275
           +SD LILKTIKQS+EM+NSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA
Sbjct: 357 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 416

Query: 276 TAGLG 290
           TAGLG
Sbjct: 417 TAGLG 421


>gb|AAP82172.1| 26S proteasome subunit RPN2A [synthetic construct]
          Length = 1000

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = +3

Query: 96  RSDFLILKTIKQSIEMKNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 275
           +SD LILKTIKQS+EM+NSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA
Sbjct: 353 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 412

Query: 276 TAGLG 290
           TAGLG
Sbjct: 413 TAGLG 417


>ref|NP_171973.1| 26S proteasome regulatory subunit N2 [Arabidopsis thaliana]
           gi|7211984|gb|AAF40455.1|AC004809_13 Strong similarity
           to the SEN3-like tRNA-processing protein F24L7.13 from
           A. thaliana gi|2914700 on BAC gb|AC003974. EST
           gb|AA712969 comes from this gene [Arabidopsis thaliana]
           gi|28393231|gb|AAO42045.1| putative 26S proteasome
           regulatory subunit (RPN2) [Arabidopsis thaliana]
           gi|332189625|gb|AEE27746.1| 26S proteasome regulatory
           subunit N2 [Arabidopsis thaliana]
          Length = 1001

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = +3

Query: 96  RSDFLILKTIKQSIEMKNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 275
           +SD LILKTIKQS+EM+NSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA
Sbjct: 354 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 413

Query: 276 TAGLG 290
           TAGLG
Sbjct: 414 TAGLG 418


>ref|XP_002265758.2| PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like
           [Vitis vinifera]
          Length = 951

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = +3

Query: 96  RSDFLILKTIKQSIEMKNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 275
           +SD LILKTIKQS+EM+NSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA
Sbjct: 358 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 417

Query: 276 TAGLG 290
           TAGLG
Sbjct: 418 TAGLG 422


>ref|XP_003530934.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like
           [Glycine max]
          Length = 1006

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = +3

Query: 96  RSDFLILKTIKQSIEMKNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 275
           +SD LILKTIKQS+EM+NSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA
Sbjct: 359 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSA 418

Query: 276 TAGLG 290
           TAGLG
Sbjct: 419 TAGLG 423


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