BLASTX nr result

ID: Bupleurum21_contig00017024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017024
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554573.1| PREDICTED: probable calcium-activated outwar...   175   1e-41
ref|XP_002874955.1| hypothetical protein ARALYDRAFT_490395 [Arab...   169   4e-40
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   167   2e-39
emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   167   2e-39
ref|XP_002320260.1| outward rectifying potassium channel [Populu...   167   3e-39

>ref|XP_003554573.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic-like [Glycine max]
          Length = 385

 Score =  175 bits (443), Expect = 1e-41
 Identities = 105/200 (52%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
 Frame = -2

Query: 598 FSFSLLISPILMEEESFAITEPQQLRQTLLNNSQDFFFDTTNLNINQEIEHPSSSDDEAD 419
           FSF LL S   ME+E F  T  Q +   LL +S+ F   TT           + + D A 
Sbjct: 2   FSFLLLFSA--MEDEPFLTTTSQPIADCLLPSSKSFNDVTT-----------TRARDVAA 48

Query: 418 SNPSTISQFLSSPIGRKKKFHRCKTAPAMTVMRDLK-KNVAKPVPDXXXXXXXXXXXXXX 242
           +    I      P  +KKK  RCKTAPAM  MRDLK K    P P               
Sbjct: 49  AAAEEIQSEQQQP-PKKKKLSRCKTAPAMVTMRDLKPKTPQLPKPQSSSIIRQGMWLLAV 107

Query: 241 XLFLGVMIYSFNRDHFSGIETHPVIDAIYFCIVTMCTIGYGDIAPSSSAAKVFACLFVLV 62
            L +GV+IYSFNRD FSGIETHPV+DA+YFCIVTMCTIGYGDIAP +   K+FAC FVLV
Sbjct: 108 YLSIGVVIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKIFACAFVLV 167

Query: 61  GFGFIDILLSGVVNYVLDLQ 2
           GFGFIDILLSG+VN+VLDLQ
Sbjct: 168 GFGFIDILLSGLVNFVLDLQ 187


>ref|XP_002874955.1| hypothetical protein ARALYDRAFT_490395 [Arabidopsis lyrata subsp.
           lyrata] gi|297320792|gb|EFH51214.1| hypothetical protein
           ARALYDRAFT_490395 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score =  169 bits (429), Expect = 4e-40
 Identities = 93/189 (49%), Positives = 121/189 (64%), Gaps = 5/189 (2%)
 Frame = -2

Query: 553 SFAITEPQQLRQTLLNNSQDFFFDTTNLNI--NQEIEHPSSSDDEADSNPSTISQFLSSP 380
           S AIT P+ +  T       FF + +   +  +Q++E     D++ DS+    ++FLS+ 
Sbjct: 28  SAAITIPRSISNT------SFFHEISQERLLHHQDLEESVQDDNDEDSDSDETNRFLSNT 81

Query: 379 IGRKKKFHRCKTAPAMTVMRDLK---KNVAKPVPDXXXXXXXXXXXXXXXLFLGVMIYSF 209
               +  HRC+TAPAM +++DL+   +   KP P                L LGV IYSF
Sbjct: 82  ----RPLHRCRTAPAMVIIKDLRPKNQETKKPSPISKSIIKQAIFLLVIYLTLGVSIYSF 137

Query: 208 NRDHFSGIETHPVIDAIYFCIVTMCTIGYGDIAPSSSAAKVFACLFVLVGFGFIDILLSG 29
           NRDH+SGIETHPV+DA+YFCIVTMCTIGYGDIAP +   K+FA +FVL GFGF+DILLSG
Sbjct: 138 NRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSG 197

Query: 28  VVNYVLDLQ 2
           VVNYVLDLQ
Sbjct: 198 VVNYVLDLQ 206


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  167 bits (423), Expect = 2e-39
 Identities = 95/157 (60%), Positives = 106/157 (67%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 NQEIEHPSSSDDEADSNPSTISQFLSSPIGRKKKFHRCKTAPAMTVMRDLKKNVA---KP 293
           NQ+I  P +        PST + FL      +K  HRCKTAPA+ VMRD K   A   KP
Sbjct: 48  NQDIRDPCAP------GPST-THFLP-----RKTIHRCKTAPALAVMRDAKSQPAQLPKP 95

Query: 292 VPDXXXXXXXXXXXXXXXLFLGVMIYSFNRDHFSGIETHPVIDAIYFCIVTMCTIGYGDI 113
             D               L LGV+IYSFNRD+FSGIETH V+DA+YFCIVTMCTIGYGDI
Sbjct: 96  NSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDI 155

Query: 112 APSSSAAKVFACLFVLVGFGFIDILLSGVVNYVLDLQ 2
           AP + A KVFAC+FVLVGFGFIDILLSGVVNYVLDLQ
Sbjct: 156 APLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQ 192


>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  167 bits (423), Expect = 2e-39
 Identities = 95/157 (60%), Positives = 106/157 (67%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 NQEIEHPSSSDDEADSNPSTISQFLSSPIGRKKKFHRCKTAPAMTVMRDLKKNVA---KP 293
           NQ+I  P +        PST + FL      +K  HRCKTAPA+ VMRD K   A   KP
Sbjct: 48  NQDIRDPCAP------GPST-THFLP-----RKTIHRCKTAPALAVMRDAKSQPAQLPKP 95

Query: 292 VPDXXXXXXXXXXXXXXXLFLGVMIYSFNRDHFSGIETHPVIDAIYFCIVTMCTIGYGDI 113
             D               L LGV+IYSFNRD+FSGIETH V+DA+YFCIVTMCTIGYGDI
Sbjct: 96  NSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDI 155

Query: 112 APSSSAAKVFACLFVLVGFGFIDILLSGVVNYVLDLQ 2
           AP + A KVFAC+FVLVGFGFIDILLSGVVNYVLDLQ
Sbjct: 156 APLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQ 192


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222861033|gb|EEE98575.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 318

 Score =  167 bits (422), Expect = 3e-39
 Identities = 83/122 (68%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
 Frame = -2

Query: 358 HRCKTAPAMTVMRDL---KKNVAKPVPDXXXXXXXXXXXXXXXLFLGVMIYSFNRDHFSG 188
           HRCKTAPAM VMR+    K  + KP PD               L LGV+IYSFN DHFSG
Sbjct: 2   HRCKTAPAMVVMREFQPTKPQIPKPQPDSTSIIRQATFLLSMYLLLGVIIYSFNTDHFSG 61

Query: 187 IETHPVIDAIYFCIVTMCTIGYGDIAPSSSAAKVFACLFVLVGFGFIDILLSGVVNYVLD 8
           IETHPV+DA+YFCIVTMCTIGYGDI P +   KVFAC+FVLVGFGFIDILLSG+VNYVLD
Sbjct: 62  IETHPVVDALYFCIVTMCTIGYGDITPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLD 121

Query: 7   LQ 2
           LQ
Sbjct: 122 LQ 123


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